hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-20254364/chunk_1/iprscan-20080501-20254364.nocrc
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Query sequence: KIAA0211
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00355                                                 204.0    1.4e-56  13

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00355      1/13    637   662 ..     1    23 []    12.3       13
SM00355      2/13    665   689 ..     1    23 []     9.0       30
SM00355      3/13    761   781 ..     1    23 []     0.3  2.9e+02
SM00355      4/13    790   812 ..     1    23 []    16.7      3.4
SM00355      5/13    818   842 ..     1    23 []     6.5       57
SM00355      6/13    849   872 ..     1    23 []    18.7     0.84
SM00355      7/13    877   900 ..     1    23 []    14.1        8
SM00355      8/13    942   965 ..     1    23 []    27.5   0.0018
SM00355      9/13   1033  1056 ..     1    23 []    22.8     0.05
SM00355     10/13   1063  1086 ..     1    23 []    28.5  0.00094
SM00355     11/13   1093  1119 ..     1    23 []    13.7      8.9
SM00355     12/13   1174  1196 ..     1    23 []    15.8      5.2
SM00355     13/13   1203  1226 ..     1    23 []    18.1      1.2

Alignments of top-scoring domains:
SM00355: domain 1 of 13, from 637 to 662: score 12.3, E = 13
                   *->ykCpigCgksfssk.aLkrHmr...vH<-*
                      y C + Cg  f  +++L +H+ +++vH   
    KIAA0211   637    YCCLE-CGDAFALEkSLSQHYGrrsVH    662  

SM00355: domain 2 of 13, from 665 to 689: score 9.0, E = 30
                   *->ykCpigCg..ksfssk.aLkrHmrvH<-*
                        C++ C+++  f +k +L rH r H   
    KIAA0211   665    VLCTL-CSktLLFFNKcSLLRHARDH    689  

SM00355: domain 3 of 13, from 761 to 781: score 0.3, E = 2.9e+02
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                       kC + C+k+ +++  L  H +     
    KIAA0211   761    IKCLE-CHKQMRDYmVLAAHFQ--    781  

SM00355: domain 4 of 13, from 790 to 812: score 16.7, E = 3.4
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ++C++ C++  +++ ++  H+r+H   
    KIAA0211   790    LTCQV-CQMLLPNQcSFCAHQRIH    812  

SM00355: domain 5 of 13, from 818 to 842: score 6.5, E = 57
                   *->ykCpigCgksfsskaLkrHmr...vH<-*
                      y Cp+ Cg  ++s+ ++ H++++  H   
    KIAA0211   818    YCCPE-CGVLCRSAYFQTHVKencLH    842  

SM00355: domain 6 of 13, from 849 to 872: score 18.7, E = 0.84
                   *->ykCpigCgksfssk.aLkrHmr.vH<-*
                      y+C + Cg +  +   Lk H++++H   
    KIAA0211   849    YRCIH-CGVVHLTLaLLKSHIQeRH    872  

SM00355: domain 7 of 13, from 877 to 900: score 14.1, E = 8
                   *->ykCpigCgksfssk.aLkrHmr.vH<-*
                      +kC + C++ f+++++   H  ++H   
    KIAA0211   877    HKCAF-CPMAFKTAsSTADHSAtQH    900  

SM00355: domain 8 of 13, from 942 to 965: score 27.5, E = 0.0018
                   *->ykCpigCgksfssk.aLkrHmr.vH<-*
                      +kCp+ C+  f +k++L +H++++H   
    KIAA0211   942    FKCPE-CPLLFVQKpELMQHVKsTH    965  

SM00355: domain 9 of 13, from 1033 to 1056: score 22.8, E = 0.05
                   *->ykCpigCgksfssk.aLkrHmr.vH<-*
                      ++C++ C++  +++++++ Hm+++H   
    KIAA0211  1033    WTCQE-CQEWVPDReSYVSHMKkSH    1056 

SM00355: domain 10 of 13, from 1063 to 1086: score 28.5, E = 0.00094
                   *->ykCpigCgksfssk.aLkrHmr.vH<-*
                      y C + C +sf+++++L++H+r+ H   
    KIAA0211  1063    YPCRQ-CEQSFHTPnSLRKHIRnNH    1086 

SM00355: domain 11 of 13, from 1093 to 1119: score 13.7, E = 8.9
                   *->ykCpigCg...ksfssk.aLkrHmr.vH<-*
                      y+C + C +++ sf++++ L+ H+  +H   
    KIAA0211  1093    YTCGY-CTedsPSFPRPsLLESHISlMH    1119 

SM00355: domain 12 of 13, from 1174 to 1196: score 15.8, E = 5.2
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ++C + C++ + s  +++ H+ +H   
    KIAA0211  1174    FQCAK-CSFATDSGlEFQSHIPQH    1196 

SM00355: domain 13 of 13, from 1203 to 1226: score 18.1, E = 1.2
                   *->ykCpigCgksfssk.aLkrHmr.vH<-*
                       +C + Cg +++s+++L rH+  vH   
    KIAA0211  1203    AQCLL-CGLCYTSAsSLSRHLFiVH    1226 

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