hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-20240685/chunk_1/iprscan-20080501-20240685.nocrc
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Query sequence: KIAA0210
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00566.9.fs TBC domain                                      30.1    4.2e-08   2
PF00566.9.ls TBC domain                                     -34.4    3.5e-05   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00566.9.ls   1/1     128   389 ..     1   219 []   -34.4  3.5e-05
PF00566.9.fs   1/2     169   230 ..    49   113 ..    20.7  1.7e-05

Alignments of top-scoring domains:
PF00566.9.ls: domain 1 of 1, from 128 to 389: score -34.4, E = 3.5e-05
                   *->vkeGvpsstrakVWavcsgAyqlrYAsageYerllrrgdekesqavd
                      + +  p    ++  ++  +         g       +  e  s    
    KIAA0210   128    IHITNPRKVVGQQDLMINNPLSQD---EGSLWNKFFQDKELRSM--- 168  

                   kIekDvkRtLvkesaFqsrGKGegiskLrrvLvAYswknPdvgYcQGMNV
                    Ie+DvkRt ++  +Fq +        L  vL  Y + n   +Y QGM  
    KIAA0210   169 -IEQDVKRTFPEMQFFQQE---NVRKILTDVLFCYARENEQLLYKQGMHE 214  

                   vaAp...........fLllykS................EeqAFyfLdrLl
                   + Ap     + +++ fL +  S +++++ ++  +++  E +A+  + +L+
    KIAA0210   215 LLAPivfvlhcdhqaFLHASESaqpseemktvlnpeylEHDAYAVFSQLM 264  

                   envvPlKYyl..........................pdldGvrlDqkvLd
                   e   P   +++ ++++++++++  ++ +  ++++ +p++  v     + d
    KIAA0210   265 ETAEPW--FStfehdgqkgketlmtpipfarpqdlgPTIAIVTKVNQIQD 312  

                   sfveellprLYeYLlskgvdlkvvsLpwfLsLyattlPleeAlrIfDiLF
                     ++  + +LY +L  + +  +++ L w   L+    Pl   l ++D LF
    KIAA0210   313 HLLKKHDIELYMHLNRLEIAPQIYGLRWVRLLFGREFPLQDLLVVWDALF 362  

                   adGivllfr..vaLAvLkilkeqiLda<-*
                   adG  l + + + +A L   ++ ++     
    KIAA0210   363 ADGLSLGLVdyIFVAMLLYIRDALISS    389  

PF00566.9.fs: domain 1 of 2, from 169 to 230: score 20.7, E = 1.7e-05
                   *->IekDvkRtLvkesaFqsrGKGegiskLrrvLvAYswknPdvgYcQGM
                      Ie+DvkRt ++  +Fq +        L  vL  Y + n   +Y QGM
    KIAA0210   169    IEQDVKRTFPEMQFFQQE---NVRKILTDVLFCYARENEQLLYKQGM 212  

                   NVvaApfLllykSEeqAF<-*
                     + Ap         qAF   
    KIAA0210   213 HELLAPIVFVLHCDHQAF    230  

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