hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080501/iprscan-20080501-20091789/chunk_1/iprscan-20080501-20091789.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0201 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00012.10.fs Hsp70 protein 753.2 1.5e-223 2 PF00012.10.ls Hsp70 protein 749.6 1.8e-222 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00012.10.fs 1/2 94 799 .. 1 618 [] 747.7 7e-222 PF00012.10.ls 1/1 94 799 .. 1 618 [] 749.6 1.8e-222 Alignments of top-scoring domains: PF00012.10.fs: domain 1 of 2, from 94 to 799: score 747.7, E = 7e-222 *->viGIDLGTTNScVAVmeggkpevIaNaeGnRtTPSvVAFtkkGErLV v+G+D G + +++AV++ g++e+IaN+ ++R+TPSv++F+ k +r + KIAA0201 94 VVGLDVGSQSCYIAVARAGGIETIANEFSDRCTPSVISFGSK-NRTI 139 GqaAKrQavtNpeNTvfsvKRlIGRrfddpeVqsdikhvPykvvkdsngd G aAK+Q++t ++NTv ++KR++GR+f+dp++q+++ +++y++v + ng KIAA0201 140 GVAAKNQQITHANNTVSNFKRFHGRAFNDPFIQKEKENLSYDLVPLKNGG 189 awveveylGkkkqftPeeISAmvLqKlKetAEayLGekVtdAVITVPAYF ++++v y+G+++ f+ e+I+Am+L+KlKetAE+ L+++Vtd+VI VP +F KIAA0201 190 VGIKVMYMGEEHLFSVEQITAMLLTKLKETAENSLKKPVTDCVISVPSFF 239 NDaQRQATKDAGrIAGLnVlRIiNEPTAAALAYGLDKkdlpe.eekernI +Da+R+++ DA++I GLn+lR++N+ TA+AL YG++K+dlp +ek+r++ KIAA0201 240 TDAERRSVLDAAQIVGLNCLRLMNDMTAVALNYGIYKQDLPSlDEKPRIV 289 lVfDLGGGTFDVSiLeigdGVFEVkaTnGDThLGGeDFDnrlvdhlveeF +++D+G++ F+VS +++++G+++V+ T++D +LGG FD++lv+h+++eF KIAA0201 290 VFVDMGHSAFQVSACAFNKGKLKVLGTAFDPFLGGKNFDEKLVEHFCAEF 339 kkkegiDlskdkrAlqRLreaAEKAKieLSsssqteinLpfitadadGPk k+k+++D ++ rAl RL +++EK+K+ +Ss+ +t+ +L+++++++ + k KIAA0201 340 KTKYKLDAKSKIRALLRLYQECEKLKKLMSSN-STDLPLNIECFMN-D-K 386 hlsetLtRAkFEeLvadLfeRtlePvekaLkDAklsksdIdeVvLVGGsT ++s++++R++FEeL+a L++++ P+ + L+++ l+++d+ V++VGG+T KIAA0201 387 DVSGKMNRSQFEELCAELLQKIEVPLYSLLEQTHLKVEDVSAVEIVGGAT 436 RIPaVqelVkefFGGKePskgVNPDEAVAiGAAvQAGVLsGseeVkDvlL RIPaV+e + +fFG K+ s+++N DEAVA+G+A+Q+++Ls++++V+++ KIAA0201 437 RIPAVKERIAKFFG-KDISTTLNADEAVARGCALQCAILSPAFKVREFSV 485 LDVtPLSLGIETlGGv.mtklIeRNTTIPtkkS.qiFSTaaDNQt.aVeI D +P +I++ ++ + + ++++ +++ +++++ ++ + +++e KIAA0201 486 TDAVP--FPISLIWNHdSEDTEGVHEVFSRNHAaPFSKVLTFLRRgPFEL 533 qVlqGERelakDN.klLGqFeLdGIpPAPrG.vPQIeVtFdIDANGIlnV ++++ +++ +++++ +G+F ++ + ++ +G+ ++V+++++ +GI+++ KIAA0201 534 EAFYSDPQGVPYPeAKIGRFVVQNVSAQKDGeKSRVKVKVRVNTHGIFTI 583 sAkDkgtgkeqkItItassgrLsddEIer..................... s + + ++k+ ++++ s+ + e +++++++++++++ ++++++ KIAA0201 584 STASM----VEKVPTEENEM-SSEADMEClnqrppenpdtdknvqqdnse 628 .................................................. +++++ +++ +++++++++++ ++++++ ++ ++ ++++ +++++ +++ KIAA0201 629 agtqpqvqtdaqqtsqsppspeltseenkipdadkanekkvdqppeakkp 678 .........................MvkdAE.kyaeeDkkrkeriEakNe + + + + + + + + +++ +M + E+k+ +Dk ker +akN KIAA0201 679 kikvvnvelpieanlvwqlgkdllnMYIETEgKMIMQDKLEKERNDAKNA 728 aEslvystekslkeeklgdkvseadkekl.kkveeaiewLkealegeddA E++vy+ +++l +++++ e+d + + ++e+++wL+e++e++ KIAA0201 729 VEEYVYEFRDKLCGP-YEKFICEQDHQNFlRLLTETEDWLYEEGEDQA-- 775 ekeeikakteeLqkvvqkigekmyq<-* k+++ +k+eeL k+++++ + ++ KIAA0201 776 -KQAYVDKLEELMKIGTPVKVRFQE 799 PF00012.10.ls: domain 1 of 1, from 94 to 799: score 749.6, E = 1.8e-222 *->viGIDLGTTNScVAVmeggkpevIaNaeGnRtTPSvVAFtkkGErLV v+G+D G + +++AV++ g++e+IaN+ ++R+TPSv++F+ k +r + KIAA0201 94 VVGLDVGSQSCYIAVARAGGIETIANEFSDRCTPSVISFGSK-NRTI 139 GqaAKrQavtNpeNTvfsvKRlIGRrfddpeVqsdikhvPykvvkdsngd G aAK+Q++t ++NTv ++KR++GR+f+dp++q+++ +++y++v + ng KIAA0201 140 GVAAKNQQITHANNTVSNFKRFHGRAFNDPFIQKEKENLSYDLVPLKNGG 189 awveveylGkkkqftPeeISAmvLqKlKetAEayLGekVtdAVITVPAYF ++++v y+G+++ f+ e+I+Am+L+KlKetAE+ L+++Vtd+VI VP +F KIAA0201 190 VGIKVMYMGEEHLFSVEQITAMLLTKLKETAENSLKKPVTDCVISVPSFF 239 NDaQRQATKDAGrIAGLnVlRIiNEPTAAALAYGLDKkdlpe.eekernI +Da+R+++ DA++I GLn+lR++N+ TA+AL YG++K+dlp +ek+r++ KIAA0201 240 TDAERRSVLDAAQIVGLNCLRLMNDMTAVALNYGIYKQDLPSlDEKPRIV 289 lVfDLGGGTFDVSiLeigdGVFEVkaTnGDThLGGeDFDnrlvdhlveeF +++D+G++ F+VS +++++G+++V+ T++D +LGG FD++lv+h+++eF KIAA0201 290 VFVDMGHSAFQVSACAFNKGKLKVLGTAFDPFLGGKNFDEKLVEHFCAEF 339 kkkegiDlskdkrAlqRLreaAEKAKieLSsssqteinLpfitadadGPk k+k+++D ++ rAl RL +++EK+K+ +Ss+ +t+ +L+++++++ + k KIAA0201 340 KTKYKLDAKSKIRALLRLYQECEKLKKLMSSN-STDLPLNIECFMN-D-K 386 hlsetLtRAkFEeLvadLfeRtlePvekaLkDAklsksdIdeVvLVGGsT ++s++++R++FEeL+a L++++ P+ + L+++ l+++d+ V++VGG+T KIAA0201 387 DVSGKMNRSQFEELCAELLQKIEVPLYSLLEQTHLKVEDVSAVEIVGGAT 436 RIPaVqelVkefFGGKePskgVNPDEAVAiGAAvQAGVLsGseeVkDvlL RIPaV+e + +fFG K+ s+++N DEAVA+G+A+Q+++Ls++++V+++ KIAA0201 437 RIPAVKERIAKFFG-KDISTTLNADEAVARGCALQCAILSPAFKVREFSV 485 LDVtPLSLGIETlGGv.mtklIeRNTTIPtkkS.qiFSTaaDNQt.aVeI D +P +I++ ++ + + ++++ +++ +++++ ++ + +++e KIAA0201 486 TDAVP--FPISLIWNHdSEDTEGVHEVFSRNHAaPFSKVLTFLRRgPFEL 533 qVlqGERelakDN.klLGqFeLdGIpPAPrG.vPQIeVtFdIDANGIlnV ++++ +++ +++++ +G+F ++ + ++ +G+ ++V+++++ +GI+++ KIAA0201 534 EAFYSDPQGVPYPeAKIGRFVVQNVSAQKDGeKSRVKVKVRVNTHGIFTI 583 sAkDkgtgkeqkItItassgrLsddEIer..................... s + + ++k+ ++++ s+ + e +++++++++++++ ++++++ KIAA0201 584 STASM----VEKVPTEENEM-SSEADMEClnqrppenpdtdknvqqdnse 628 .................................................. +++++ +++ +++++++++++ ++++++ ++ ++ ++++ +++++ +++ KIAA0201 629 agtqpqvqtdaqqtsqsppspeltseenkipdadkanekkvdqppeakkp 678 .........................MvkdAE.kyaeeDkkrkeriEakNe + + + + + + + + +++ +M + E+k+ +Dk ker +akN KIAA0201 679 kikvvnvelpieanlvwqlgkdllnMYIETEgKMIMQDKLEKERNDAKNA 728 aEslvystekslkeeklgdkvseadkekl.kkveeaiewLkealegeddA E++vy+ +++l +++++ e+d + + ++e+++wL+e++e++ KIAA0201 729 VEEYVYEFRDKLCGP-YEKFICEQDHQNFlRLLTETEDWLYEEGEDQA-- 775 ekeeikakteeLqkvvqkigekmyq<-* k+++ +k+eeL k+++++ + ++ KIAA0201 776 -KQAYVDKLEELMKIGTPVKVRFQE 799 //