hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-19295076/chunk_1/iprscan-20080501-19295076.nocrc
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Query sequence: KIAA0177
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00609                                                 215.9    3.5e-60   1
SM00327                                                  70.2    2.7e-16   1
SM00292                                                  63.1    3.6e-14   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00292    1/1       4    85 ..     1    93 []    63.1  3.6e-14
SM00609    1/1     608   736 ..     1   132 []   215.9  3.5e-60
SM00327    1/1     875  1038 ..     1   193 []    70.2  2.7e-16

Alignments of top-scoring domains:
SM00292: domain 1 of 1, from 4 to 85: score 63.1, E = 3.6e-14
                   *->sklfkgltfvltGddiegkfd.e.rdelkeliealGGkvt.svsrkk
                      +++f+++ f+l     ++ ++++++++l+  i+++GGk++ s     
    KIAA0177     4    MGIFANCIFCLK----VKYLPqQqKKKLQTDIKENGGKFSfS----- 41   

                   l.pttthviv.spegkkletdnrsstkllkaialgipiVteeWlldclkk
                   l+p++th+i ++++    +++n        +++++++i +++++++++++
    KIAA0177    42 LnPQCTHIILdNADVLSQYQLN-------SIQKNHVHIANPDFIWKSIRE 84   

                   g<-*
                   +   
    KIAA0177    85 K    85   

SM00609: domain 1 of 1, from 608 to 736: score 215.9, E = 3.5e-60
                   *->llakrglltaevngVplySlkVnskVtSRfAhtvVTsrvvNrapdpa
                      +++k+gl++a++n Vpl+++++++++++++A+++V+++++N++++p+
    KIAA0177   608    SSTKAGLQDASGNLVPLEDVHIKGRIIDTVAQVIVFQTYTNKSHVPI 654  

                   qevvFdvelPktAFISnFamTiDGktyvGeiKEKavAqkqYekAvaqGkt
                   +++++++ ++k+A+++++a+ i+Gk++vGeiKEK++Aq++Y +Av+qG++
    KIAA0177   655 EAKYIFPLDDKAAVCGFEAF-INGKHIVGEIKEKEEAQQEYLEAVTQGHG 703  

                   AgLVrasgrkmEqFtvsVGnvaPgsKVtFeLtYeE<-*
                   A+L++++++  ++FtvsVGn++P++KV++++tY++   
    KIAA0177   704 AYLMSQDAP--DVFTVSVGNLPPKAKVLIKITYIT    736  

SM00327: domain 1 of 1, from 875 to 1038: score 70.2, E = 2.7e-16
                   *->plDvvfllDgSgSmggnrfekvkefv.klveqld.gdrvglvqFssd
                      +  v+++lD+S+Sm g +f ++ke +   ++   ++  v ++qF+++
    KIAA0177   875    ESEVIICLDCSSSMEGVTFLQAKEIAlHALSLVGeKQKVNIIQFGTG 921  

                   vrvefpln..sqskdallealaslsykglkdyslgggTnlg.ALqyalen
                    +++f+  ++ +s +a+ e ++s  +       + g+T++ + L+y    
    KIAA0177   922 YKELFSYPkhITSNTAAAEFIMSATP-------TMGNTDFWkTLRYLSLL 964  

                   lfsesag.rrgagratkiSnvpkvliliTDGesndggddpedileaakel
                           r             + ++l++DG+ +       d + + + +
    KIAA0177   965 -----YPaRG-----------SRNILLVSDGHLQ-------DESLTLQLV 991  

                   krsg..vkvfvigvgna.de.elkeiasep.gehvffdvsdvedlpslld
                   krs+++ ++f+ g+g+  +++ l+++++++ g++             +++
    KIAA0177   992 KRSRphTRLFACGIGSTaNRhILRILSQCGaGVF----------EYFNAK 1031 

                   llidlll<-*
                      ++ +   
    KIAA0177  1032 SKHSWRK    1038 

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