hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-19214511/chunk_1/iprscan-20080501-19214511.nocrc
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Query sequence: KIAA0172
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00248                                                 112.8    3.8e-29   6

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00248    1/6     971  1001 ..     1    30 []     2.9  1.9e+03
SM00248    2/6    1175  1205 ..     1    30 []    31.0  0.00017
SM00248    3/6    1209  1242 ..     1    30 []    11.5  1.2e+02
SM00248    4/6    1247  1276 ..     1    30 []    33.8  2.4e-05
SM00248    5/6    1280  1312 ..     1    30 []    21.7      0.1
SM00248    6/6    1314  1342 ..     1    30 []    11.9       91

Alignments of top-scoring domains:
SM00248: domain 1 of 6, from 971 to 1001: score 2.9, E = 1.9e+03
                   *->dGrTpLHlAaengnlevvklLldkga.dina<-*
                      d++ +  l+a+++n++++k +++k+ ++ +    
    KIAA0172   971    DDQIAAGLYACTNNESTLKSIMKKKDgNKDS    1001 

SM00248: domain 2 of 6, from 1175 to 1205: score 31.0, E = 0.00017
                   *->dGrTpLHlAaengnlevvklLldkga.dina<-*
                      +G+T+LH+ +++ n e+vklLld+++ +++    
    KIAA0172  1175    NGNTALHYSVSHSNFEIVKLLLDADVcNVDH    1205 

SM00248: domain 3 of 6, from 1209 to 1242: score 11.5, E = 1.2e+02
                   *->dGrTpLHlAaen.....gnlevvklLldkgadina<-*
                       G+Tp++lAa    + ++++ +v++L   g d+na   
    KIAA0172  1209    AGYTPIMLAALAaveaeKDMRIVEELFGCG-DVNA    1242 

SM00248: domain 4 of 6, from 1247 to 1276: score 33.8, E = 2.4e-05
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                       G+T+L+lA+++g++++vk Ll  gad+n+   
    KIAA0172  1247    AGQTALMLAVSHGRIDMVKGLLACGADVNI    1276 

SM00248: domain 5 of 6, from 1280 to 1312: score 21.7, E = 0.1
                   *->dGrTpLHlAaengnlevvklLldkga...dina<-*
                      +G T+L++A e+g++e+vklLl   + ++ +++   
    KIAA0172  1280    EGSTALMCASEHGHVEIVKLLLAQPGcngHLED    1312 

SM00248: domain 6 of 6, from 1314 to 1342: score 11.9, E = 91
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      dG T+L +A e g+++++ lL  +  ++ +   
    KIAA0172  1314    DGSTALSIALEAGHKDIAVLLYAHV-NFAK    1342 

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