hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-19214511/chunk_1/iprscan-20080501-19214511.nocrc
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Query sequence: KIAA0172
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00023.20.ls Ankyrin repeat                                 133.0    7.6e-37   5
PF00023.20.fs Ankyrin repeat                                 128.5    1.8e-35   5

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00023.20.fs   1/5    1175  1205 ..     1    33 []    31.6  7.9e-08
PF00023.20.ls   1/5    1175  1205 ..     1    33 []    33.5  6.7e-07
PF00023.20.ls   2/5    1209  1245 ..     1    33 []    16.2     0.11
PF00023.20.fs   2/5    1209  1245 ..     1    33 []    14.3   0.0054
PF00023.20.ls   3/5    1247  1279 ..     1    33 []    44.9  2.6e-10
PF00023.20.fs   3/5    1247  1279 ..     1    33 []    42.9  5.7e-11
PF00023.20.fs   4/5    1280  1313 ..     1    33 []    29.5    3e-07
PF00023.20.ls   4/5    1280  1313 ..     1    33 []    31.5  2.7e-06
PF00023.20.fs   5/5    1314  1334 ..     1    21 [.    10.2    0.073
PF00023.20.ls   5/5    1314  1343 ..     1    33 []     6.9      2.9

Alignments of top-scoring domains:
PF00023.20.fs: domain 1 of 5, from 1175 to 1205: score 31.6, E = 7.9e-08
                   *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-*
                      +G+T+LH+ +++ n e+vklLl+  Ad++ +d    
    KIAA0172  1175    NGNTALHYSVSHSNFEIVKLLLD--ADVCNVDH    1205 

PF00023.20.ls: domain 1 of 5, from 1175 to 1205: score 33.5, E = 6.7e-07
                   *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-*
                      +G+T+LH+ +++ n e+vklLl+  Ad++ +d    
    KIAA0172  1175    NGNTALHYSVSHSNFEIVKLLLD--ADVCNVDH    1205 

PF00023.20.ls: domain 2 of 5, from 1209 to 1245: score 16.2, E = 0.11
                   *->dGfTPLHlAalrg.....nlevvklLlsqGAdlnaqdd<-*
                       G+TP++lAal   + ++++++v++L +   d+na+     
    KIAA0172  1209    AGYTPIMLAALAAveaekDMRIVEELFG-CGDVNAKAS    1245 

PF00023.20.fs: domain 2 of 5, from 1209 to 1245: score 14.3, E = 0.0054
                   *->dGfTPLHlAalrg.....nlevvklLlsqGAdlnaqdd<-*
                       G+TP++lAal   + ++++++v++L +   d+na+     
    KIAA0172  1209    AGYTPIMLAALAAveaekDMRIVEELFG-CGDVNAKAS    1245 

PF00023.20.ls: domain 3 of 5, from 1247 to 1279: score 44.9, E = 2.6e-10
                   *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-*
                       G+T+L+lA+++g++++vk Ll +GAd+n+qdd   
    KIAA0172  1247    AGQTALMLAVSHGRIDMVKGLLACGADVNIQDD    1279 

PF00023.20.fs: domain 3 of 5, from 1247 to 1279: score 42.9, E = 5.7e-11
                   *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-*
                       G+T+L+lA+++g++++vk Ll +GAd+n+qdd   
    KIAA0172  1247    AGQTALMLAVSHGRIDMVKGLLACGADVNIQDD    1279 

PF00023.20.fs: domain 4 of 5, from 1280 to 1313: score 29.5, E = 3e-07
                   *->dGfTPLHlAalrgnlevvklLls.qGAdlnaqdd<-*
                      +G T+L++A+++g++e+vklLl + G++ ++ d+   
    KIAA0172  1280    EGSTALMCASEHGHVEIVKLLLAqPGCNGHLEDN    1313 

PF00023.20.ls: domain 4 of 5, from 1280 to 1313: score 31.5, E = 2.7e-06
                   *->dGfTPLHlAalrgnlevvklLls.qGAdlnaqdd<-*
                      +G T+L++A+++g++e+vklLl + G++ ++ d+   
    KIAA0172  1280    EGSTALMCASEHGHVEIVKLLLAqPGCNGHLEDN    1313 

PF00023.20.fs: domain 5 of 5, from 1314 to 1334: score 10.2, E = 0.073
                   *->dGfTPLHlAalrgnlevvklL<-*
                      dG T+L +A + g+++++ lL   
    KIAA0172  1314    DGSTALSIALEAGHKDIAVLL    1334 

PF00023.20.ls: domain 5 of 5, from 1314 to 1343: score 6.9, E = 2.9
                   *->dGfTPLHlAalrgnlevvklLlsqGAdlnaqdd<-*
                      dG T+L +A + g+++++ lL      +n       
    KIAA0172  1314    DGSTALSIALEAGHKDIAVLLYA---HVNFAKA    1343 

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