hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-19200931/chunk_1/iprscan-20080501-19200931.nocrc
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Query sequence: KIAA0171
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00273                                                 218.9    4.5e-61   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00273    1/1      52   179 ..     1   137 []   218.9  4.5e-61

Alignments of top-scoring domains:
SM00273: domain 1 of 1, from 52 to 179: score 218.9, E = 4.5e-61
                   *->sdlevkVrkATnndewgpkgkhlreIlqgTsneklrssfaeimavlw
                      s+ e+kVr+ATn+d+wgp+g+++ eI+++T ++   ++f+e+m++lw
    KIAA0171    52    SEIESKVREATNDDPWGPSGQLMGEIAKATFMY---EQFPELMNMLW 95   

                   rRLndk.gknWrvvyKaLillhyLlrnGspfervvlealrnrnrIltLsd
                   +R+ ++++knWr+vyK+L+ll yL+rnGs  ervv +a+++++++++L++
    KIAA0171    96 SRMLKDnKKNWRRVYKSLLLLAYLIRNGS--ERVVTSAREHIYDLRSLEN 143  

                   fqdkvfndidsrgkDqGaniRtyakyLlelledderlkeer<-*
                   +++     +d++gkDqG+niR+++k+L+e ++dd+rl+eer   
    KIAA0171   144 YHF-----VDEHGKDQGINIRQKVKELVEFAQDDDRLREER    179  

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