hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-19133613/chunk_1/iprscan-20080501-19133613.nocrc
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Query sequence: KIAA0167
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00105                                                 224.4      1e-62   1
SM00233                                                  65.7    5.6e-15   1
SM00173                                                  -6.9    2.5e-07   1
SM00175                                                 -25.8      1e-06   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00173     1/1      76   244 ..     1   167 []    -6.9  2.5e-07
SM00175     1/1      79   241 ..     1   172 []   -25.8    1e-06
SM00233     1/1     349   564 ..     1    82 []    65.7  5.6e-15
SM00105     1/1     583   703 ..     1   139 []   224.4    1e-62

Alignments of top-scoring domains:
SM00173: domain 1 of 1, from 76 to 244: score -6.9, E = 2.5e-07
                   *->mreYKlVVlGgGGVGKSALTiQFiqghFvdeYDPTIEDSYrKqieiD
                      ++e +l VlG+   GKS+L  +F +g + +  + T   +Y+K+  +D
    KIAA0167    76    IPELRLGVLGDARSGKSSLIHRFLTGSY-QVLEKTESEQYKKEMLVD 121  

                   gevalLDILDTAGQeEFsAMRdqYmRtGeGFlLVYSitsrqSFeeikkfr
                   g++ l  I   AG  +       ++   +  + V+S+ + +SF+ +++++
    KIAA0167   122 GQTHLVLIREEAGAPD-----AKFSGWADAVIFVFSLEDENSFQAVSRLH 166  

                   eqI..lRVKdrddvPivLVGNKcDLene...RqVsteEGkeLAkqln.cp
                    q+++lR  +r    + LVG   D+ + +++R+V  + +++L +++++c 
    KIAA0167   167 GQLssLRGEGRGGLALALVGT-QDRISAsspRVVGDARARALCADMKrCS 215  

                   FlEtSAKerinVdeaFydL...VReirks<-*
                   ++Et A +  nVd +F+++ ++V   rk+   
    KIAA0167   216 YYETCATYGLNVDRVFQEVaqkVVTLRKQ    244  

SM00175: domain 1 of 1, from 79 to 241: score -25.8, E = 1e-06
                   *->FKiilIGDSGVGKSsLLsRFtddkF.......sedsksTIGVDFktk
                      +++ ++GD   GKSsL++RF +++++  ++++se++k    VD +t+
    KIAA0167    79    LRLGVLGDARSGKSSLIHRFLTGSYqvlekteSEQYKKEMLVDGQTH 125  

                   tiev....dGkrvKLQIWDTAGQERFRSiTssYYRGAvGalLVYDiTnre
                    + ++++ +    K   W                  A+++++V+ + +++
    KIAA0167   126 LVLIreeaGAPDAKFSGW------------------ADAVIFVFSLEDEN 157  

                   SFenlkn...WlkelreyadpppenvvimLVGN..KsDLeeqRqVstEea
                   SF+ +++ ++ l+ lr        +    LVG ++ +  ++ R+V   +a
    KIAA0167   158 SFQAVSRlhgQLSSLRGEGRG---GLALALVGTqdRISASSPRVVGDARA 204  

                   ekficDcAeehgllFifETSAKtntNVeeAFeelakkIlkr<-*
                   +++   cA+   ++++ ET A  ++NV+ +F+e+a+k++ +   
    KIAA0167   205 RAL---CADMKRCSYY-ETCATYGLNVDRVFQEVAQKVVTL    241  

SM00233: domain 1 of 1, from 349 to 564: score 65.7, E = 5.6e-15
                   *->vikeGwLlkks....k.swkkryfvLfngvLlyyksk.......kpk
                      +ik+ +Llk+s+++ ++ wkk+y++L ++ +l+y+++ ++  ++++ 
    KIAA0167   349    PIKQSFLLKRSgnslNkEWKKKYVTLSSNGFLLYHPSindyihsTHG 395  

                   gsipLsgcsvre.p....................................
                   ++++L   +v+++ +++++  +  +++ + ++  ++ +    +++ +   
    KIAA0167   396 KEMDLLRTTVKVpGkrppraisafgpsasinglvkdmstvqmgegleatt 445  

                   ..................................................
                   + +++++++++  ++++  +++  +++++  +  + +  ++++ ++ +++
    KIAA0167   446 pmpspspspsslqpppdqtskhllkpdrnlaralstdctpsgdlsplsre 495  

                   .................................cFeivt.dr.tlllqAe
                   +++++  ++ ++++   +++ +++ +  ++++  F iv+++++t+++ A 
    KIAA0167   496 pppspmvkkqrrkklttpsktegsagqaeeenfEFLIVSsTGqTWHFEAA 545  

                   seeereeWvealqsaiaka<-*
                   s eer+ Wv+a++s i  +   
    KIAA0167   546 SFEERDAWVQAIESQILAS    564  

SM00105: domain 1 of 1, from 583 to 703: score 224.4, E = 1e-62
                   *->eealqlLRsikpgNkkCfDCGavpnPtWaSvnlGvflCieCSGiHRs
                      + a+q +R+ k gN+ C+DCGa pnPtWaS+nlG+++CieCSGiHR+
    KIAA0167   583    AVAIQAIRNAK-GNSICVDCGA-PNPTWASLNLGALICIECSGIHRN 627  

                   LfGvHiSkVnvRSltLDtWteeeLrllesckgGNenansfwesnlddfsl
                   L G+H+S+V  RSl+LD+W++ eL+l++ +++GN++an++wes+++ +++
    KIAA0167   628 L-GTHLSRV--RSLDLDDWPR-ELTLVL-TAIGNDTANRVWESDTRGRAK 672  

                   kpkdsdaaasvKCeddrqkyesfiaaKYeeklfrvdkesaee<-*
                   +++ds+          r+++es+i+aKYe++lf + ++s++e   
    KIAA0167   673 PSRDSS----------REERESWIRAKYEQLLF-LAPLSTSE    703  

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