hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-19100586/chunk_1/iprscan-20080501-19100586.nocrc
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Query sequence: KIAA0165
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model         Description                               Score    E-value  N 
--------      -----------                               -----    ------- ---
PF03568.7.ls  Peptidase family C50                      541.7   7.2e-160   1
PF03568.7.fs  Peptidase family C50                      539.9   2.5e-159   1

Parsed for domains:
Model         Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------      ------- ----- -----    ----- -----      -----  -------
PF03568.7.fs    1/1    1681  2042 ..     1   475 []   539.9 2.5e-159
PF03568.7.ls    1/1    1681  2042 ..     1   475 []   541.7 7.2e-160

Alignments of top-scoring domains:
PF03568.7.fs: domain 1 of 1, from 1681 to 2042: score 539.9, E = 2.5e-159
                   *->vvvgdllsvlteaeidiskltntLllsrcclspersPflhlrLPldr
                      v+      vl++a++++ +++ntLll+r  l+++++P+  +++P+ +
    KIAA0165  1681    VC------VLALATLQPGTVGNTLLLTR--LEKDSPPVS-VQIPTGQ 1718 

                   insrdldeetWCPWGyltFdevleefreIitesnetvSievtkknktked
                   ++ + ++              vl+ef+ I++ ++e++         +++d
    KIAA0165  1719 NKLHLRS--------------VLNEFDAIQKAQKENS---------SCTD 1745 

                   kekwWkeReaLDkrlkkLlaniEeswLGpfkglflgkvldkksfekfask
                   k++wW++R aLD+r++ L+a++E+s+LG++kgl+l     ++s e+ +++
    KIAA0165  1746 KREWWTGRLALDHRMEVLIASLEKSVLGCWKGLLL-----PSSEEPGPAQ 1790 

                   fyniLdefLpsrkkGgsrnqapfltvdprlLelfClgldksdddeedfiv
                   + ++L+e L+++ +          ++d++lL+ +                
    KIAA0165  1791 EASRLQELLQDCGW---------KYPDRTLLKIM---------------- 1815 

                   DknfkkyasrledLiyfvldiLqfhgerNSdSSvELaydEidldllhvll
                          +s+++ L+++++++L +            ++++++++++++ll
    KIAA0165  1816 -------LSGAGALTPQDIQALAY------------GLCPTQPERAQELL 1846 

                   eealnkynedskdeklnrehtiLVlDkslhqfPWEslpilqeqsyVsRvp
                   +ea+++++  ++++    +h++LVlDk+l+++PWEs+p+lq ++ V+R+p
    KIAA0165  1847 NEAVGRLQGLTVPS---NSHLVLVLDKDLQKLPWESMPSLQALP-VTRLP 1892 

                   SlhcLssllkrrksqispaystknekkniikyvPYyIsdriIDPkkSkgf
                   S+++L s++  ++++ sp++s+++++++                    +f
    KIAA0165  1893 SFRFLLSYSIIKEYGASPVLSQGVDPRS--------------------TF 1922 

                   yiLNPdgDLkrTqerFrsFIyfkswlgskpknWeGvigsvPseeefvkaL
                   y+LNP+++L++T+e+Fr    f+s++g     W+Gv+g+vP  e++++aL
    KIAA0165  1923 YVLNPHNNLSSTEEQFRA--NFSSEAG-----WRGVVGEVPRPEQVQEAL 1965 

                   tnsDlFlYfGHGsGeQYvrgrtikrldcnavsfLfGCSSaalieaGlyfe
                   t++Dl++Y+GHG+G+++++g+ ++rl+c+av++LfGCSSaal+++G+ +e
    KIAA0165  1966 TKHDLYIYAGHGAGARFLDGQAVLRLSCRAVALLFGCSSAALAVHGN-LE 2014 

                   pyGailsYlmAgcPmvvGnLWDVTDkdI<-*
                   ++G++l+Y+mAgcP+++GnLWDVTD+dI   
    KIAA0165  2015 GAGIVLKYIMAGCPLFLGNLWDVTDRDI    2042 

PF03568.7.ls: domain 1 of 1, from 1681 to 2042: score 541.7, E = 7.2e-160
                   *->vvvgdllsvlteaeidiskltntLllsrcclspersPflhlrLPldr
                      v+      vl++a++++ +++ntLll+r  l+++++P+  +++P+ +
    KIAA0165  1681    VC------VLALATLQPGTVGNTLLLTR--LEKDSPPVS-VQIPTGQ 1718 

                   insrdldeetWCPWGyltFdevleefreIitesnetvSievtkknktked
                   ++ + ++              vl+ef+ I++ ++e++         +++d
    KIAA0165  1719 NKLHLRS--------------VLNEFDAIQKAQKENS---------SCTD 1745 

                   kekwWkeReaLDkrlkkLlaniEeswLGpfkglflgkvldkksfekfask
                   k++wW++R aLD+r++ L+a++E+s+LG++kgl+l     ++s e+ +++
    KIAA0165  1746 KREWWTGRLALDHRMEVLIASLEKSVLGCWKGLLL-----PSSEEPGPAQ 1790 

                   fyniLdefLpsrkkGgsrnqapfltvdprlLelfClgldksdddeedfiv
                   + ++L+e L+++ +          ++d++lL+ +                
    KIAA0165  1791 EASRLQELLQDCGW---------KYPDRTLLKIM---------------- 1815 

                   DknfkkyasrledLiyfvldiLqfhgerNSdSSvELaydEidldllhvll
                          +s+++ L+++++++L +            ++++++++++++ll
    KIAA0165  1816 -------LSGAGALTPQDIQALAY------------GLCPTQPERAQELL 1846 

                   eealnkynedskdeklnrehtiLVlDkslhqfPWEslpilqeqsyVsRvp
                   +ea+++++  ++++    +h++LVlDk+l+++PWEs+p+lq ++ V+R+p
    KIAA0165  1847 NEAVGRLQGLTVPS---NSHLVLVLDKDLQKLPWESMPSLQALP-VTRLP 1892 

                   SlhcLssllkrrksqispaystknekkniikyvPYyIsdriIDPkkSkgf
                   S+++L s++  ++++ sp++s+++++++                    +f
    KIAA0165  1893 SFRFLLSYSIIKEYGASPVLSQGVDPRS--------------------TF 1922 

                   yiLNPdgDLkrTqerFrsFIyfkswlgskpknWeGvigsvPseeefvkaL
                   y+LNP+++L++T+e+Fr    f+s++g     W+Gv+g+vP  e++++aL
    KIAA0165  1923 YVLNPHNNLSSTEEQFRA--NFSSEAG-----WRGVVGEVPRPEQVQEAL 1965 

                   tnsDlFlYfGHGsGeQYvrgrtikrldcnavsfLfGCSSaalieaGlyfe
                   t++Dl++Y+GHG+G+++++g+ ++rl+c+av++LfGCSSaal+++G+ +e
    KIAA0165  1966 TKHDLYIYAGHGAGARFLDGQAVLRLSCRAVALLFGCSSAALAVHGN-LE 2014 

                   pyGailsYlmAgcPmvvGnLWDVTDkdI<-*
                   ++G++l+Y+mAgcP+++GnLWDVTD+dI   
    KIAA0165  2015 GAGIVLKYIMAGCPLFLGNLWDVTDRDI    2042 

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