hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-19033002/chunk_1/iprscan-20080501-19033002.nocrc
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Query sequence: KIAA0161
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00647                                                  85.9      5e-21   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00647    1/2     125   190 ..     1    78 []    80.3  2.3e-19
SM00647    2/2     202   266 ..     1    78 []     5.5     0.46

Alignments of top-scoring domains:
SM00647: domain 1 of 2, from 125 to 190: score 80.3, E = 2.3e-19
                   *->ekYerlllesyvesnpdlkwCPapdCsaairvtelstsrsaisgasd
                      ++Y++l +e++v  +p ++wCPa+ C+a+++ ++ +           
    KIAA0161   125    QRYKKLQFEREVLFDPCRTWCPASTCQAVCQLQDVG----------- 160  

                   eegcnrvtCprkCgfsFCfrCkvewHspvsC<-*
                    + +++v+C+ +C+ +FC+ Ck+ wH+++ C   
    KIAA0161   161 LQTPQPVQCK-ACRMEFCSTCKASWHPGQGC    190  

SM00647: domain 2 of 2, from 202 to 266: score 5.5, E = 0.46
                   *->ekYerlllesyvesnpdlkwCPapdCsaairvtelstsrsaisgasd
                         e     +  e+++ +k CP  +C  ++++               
    KIAA0161   202    ---ETSAAFKMEEDDAPIKRCP--KC-KVYIER-------------- 228  

                   eegcnrvtCprkCgfsFCfrCkvew.......Hspv.sC<-*
                   +egc ++ C+  C+++FC+ C++  +++    H++ + C   
    KIAA0161   229 DEGCAQMMCK-NCKHAFCWYCLESLdddflliHYDKgPC    266  

//