hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-18532613/chunk_1/iprscan-20080501-18532613.nocrc
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Query sequence: KIAA0155
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00028                                                 226.3    2.7e-63  10

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00028    1/10    185   218 ..     1    34 []    26.8   0.0031
SM00028    2/10    220   253 ..     1    34 []    30.3  0.00027
SM00028    3/10    328   361 ..     1    34 []    25.8   0.0059
SM00028    4/10    363   396 ..     1    34 []    27.5   0.0019
SM00028    5/10    473   506 ..     1    34 []    19.5     0.48
SM00028    6/10    519   552 ..     1    34 []    25.1   0.0099
SM00028    7/10    553   586 ..     1    34 []    29.6  0.00042
SM00028    8/10    587   620 ..     1    34 []     4.9  1.4e+02
SM00028    9/10    703   736 ..     1    34 []    24.8    0.012
SM00028   10/10    739   772 ..     1    34 []    12.1       21

Alignments of top-scoring domains:
SM00028: domain 1 of 10, from 185 to 218: score 26.8, E = 0.0031
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                      + al+ ++ + ++++dy  A++yy+kAL+ +P +   
    KIAA0155   185    IPALLGKACISFNKKDYRGALAYYKKALRTNPGC    218  

SM00028: domain 2 of 10, from 220 to 253: score 30.3, E = 0.00027
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                      ae+ + +G+++ kl+++++A  ++++ALel+ ++   
    KIAA0155   220    AEVRLGMGHCFVKLNKLEKARLAFSRALELNSKC    253  

SM00028: domain 3 of 10, from 328 to 361: score 25.8, E = 0.0059
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                      ae +y+l+ +++ ++dyd+A +yy +A + + +    
    KIAA0155   328    AESCYQLARSFHVQEDYDQAFQYYYQATQFASSS    361  

SM00028: domain 4 of 10, from 363 to 396: score 27.5, E = 0.0019
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                      +  ++ lG++y  +gd + A +++ek+L+  Pnn   
    KIAA0155   363    VLPFFGLGQMYIYRGDKENASQCFEKVLKAYPNN    396  

SM00028: domain 5 of 10, from 473 to 506: score 19.5, E = 0.48
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                      +e+l+n G ++++lg++ eA +y+  +L+ +      
    KIAA0155   473    PEILNNVGALHFRLGNLGEAKKYFLASLDRAKAE    506  

SM00028: domain 6 of 10, from 519 to 552: score 25.1, E = 0.0099
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                      + + ynl+ +y+++ ++ eA++ y+  L+  Pn+   
    KIAA0155   519    VTTSYNLARLYEAMCEFHEAEKLYKNILREHPNY    552  

SM00028: domain 7 of 10, from 553 to 586: score 29.6, E = 0.00042
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                      ++++++lG + + +g++ eA + +++AL+++ ++   
    KIAA0155   553    VDCYLRLGAMARDKGNFYEASDWFKEALQINQDH    586  

SM00028: domain 8 of 10, from 587 to 620: score 4.9, E = 1.4e+02
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                      ++a++ +Gn++l++ ++    + +e+ L+   +    
    KIAA0155   587    PDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQ    620  

SM00028: domain 9 of 10, from 703 to 736: score 24.8, E = 0.012
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                      +++++nl+++y  +++y  A++ ye +L+   ++   
    KIAA0155   703    SDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKH    736  

SM00028: domain 10 of 10, from 739 to 772: score 12.1, E = 21
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                       e+ + l+ a++k g+++e+ + + kA  ++P++   
    KIAA0155   739    TEVVLYLARALFKCGKLQECKQTLLKARHVAPSD    772  

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