hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-18300087/chunk_1/iprscan-20080501-18300087.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: KIAA0141
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00671                                                 120.2    2.2e-31   5

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00671    1/5     266   297 ..     1    43 []     1.9  2.2e+02
SM00671    2/5     298   333 ..     1    43 []    53.8  2.2e-11
SM00671    3/5     334   371 ..     1    43 []     4.0  1.3e+02
SM00671    4/5     372   405 ..     1    43 []    16.4        4
SM00671    5/5     406   441 ..     1    43 []    44.1  1.9e-08

Alignments of top-scoring domains:
SM00671: domain 1 of 5, from 266 to 297: score 1.9, E = 2.2e+02
                   *->aeAqynLGqmYeyGlenpngklGvpkDyekAleyykkAAeqGh<-*
                      + A + LG   ++             D+  A+ y++kAA+ G+   
    KIAA0141   266    SIAFNFLGTENMKSG-----------DHTAAFSYFQKAAARGY    297  

SM00671: domain 2 of 5, from 298 to 333: score 53.8, E = 2.2e-11
                   *->aeAqynLGqmYeyGlenpngklGvpkDyekAleyykkAAeqGh<-*
                      ++Aqyn G ++e+G+       G+p+D  kA+ yy++AA+qGh   
    KIAA0141   298    SKAQYNAGLCHEHGR-------GTPRDISKAVLYYQLAASQGH    333  

SM00671: domain 3 of 5, from 334 to 371: score 4.0, E = 1.3e+02
                   *->aeAqynLGqmYeyGlenpngklGvpkDyekAleyykkAAeqGh<-*
                      + Aqy+ +++ ++            +  + A+ ++k+AA+ G    
    KIAA0141   334    SLAQYRYARCLLRDP-----ASSWNPERQRAVSLLKQAADSGL    371  

SM00671: domain 4 of 5, from 372 to 405: score 16.4, E = 4
                   *->aeAqynLGqmYeyGlenpngklGvpkDyekAleyykkAAeqGh<-*
                       eAq  LG+++ +             D++ A++y+ +AA++G+   
    KIAA0141   372    REAQAFLGVLFTKEP---------YLDEQRAVKYLWLAANNGD    405  

SM00671: domain 5 of 5, from 406 to 441: score 44.1, E = 1.9e-08
                   *->aeAqynLGqmYeyGlenpngklGvpkDyekAleyykkAAeqGh<-*
                      +++ y+LG++Ye+Gl       Gv +++ +Al++y+++A++G+   
    KIAA0141   406    SQSRYHLGICYEKGL-------GVQRNLGEALRCYQQSAALGN    441  

//