hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-18232795/chunk_1/iprscan-20080501-18232795.nocrc
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Query sequence: KIAA0137
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00220                                                 265.0    5.8e-75   1
SM00219                                                  -7.8    1.2e-10   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00219    1/1     491   767 ..     1   280 []    -7.8  1.2e-10
SM00220    1/1     491   769 ..     1   231 []   265.0  5.8e-75

Alignments of top-scoring domains:
SM00219: domain 1 of 1, from 491 to 767: score -7.8, E = 1.2e-10
                   *->ltlgkkLGeGaFGeVykGtlk...ieVAVKtLkeda..........k
                        l++ LG+G F eVyk+    +++  AVK  + +++ +++++++ +
    KIAA0137   491    YLLLHLLGRGGFSEVYKAFDLyeqRYAAVKIHQLNKswrdekkenyH 537  

                   eeFlrEakiMkklGgkHpNiVkLl.GvcteegrrFmevePlmivmEymeg
                   +  +rE +i k+l  +Hp iVkL++   ++        +  + v+Ey+eg
    KIAA0137   538 KHACREYRIHKEL--DHPRIVKLYdYFSLDT-------DTFCTVLEYCEG 578  

                   GdLldyLrknrpklslsdLlsfAlQIAkGMeYLesk..nfvHRDLAARNc
                    dL+ yL+ ++   s ++  s+  QI +  +YL + +++++H DL   N+
    KIAA0137   579 NDLDFYLKQHKL-MSEKEARSIVMQIVNALRYLNEIkpPIIHYDLKPGNI 627  

                   Lvgenk...vvKIsDFGLsRdlyddDkkGeskdyYrkkggkggktllPir
                   L+ ++   + +KI+DFGLs+  +dd + G+ +   ++    +g     + 
    KIAA0137   628 LLVDGTacgEIKITDFGLSKIMDDD-SYGVDGMDLTS----QGA--GTYW 670  

                   WmAPEslkdg....kFtskSDVWSFGVlLWEiftlGeqPYpgeiqq.fms
                    ++PE++  g++++k + k DVWS GV  +  + +G +P      q+++ 
    KIAA0137   671 YLPPECFVVGkeppKISNKVDVWSVGVIFF-QCLYGRKPFGHNQSQqDIL 719  

                   neevleylkkGyRlpkPendlpiSsvtCPdelYdlMlqCWaedPedRPtF
                    e  + +  +   + kP           ++e    +++C a+  edR   
    KIAA0137   720 QENTILKATEVQFPVKPVV---------SSEAKAFIRRCLAYRKEDRFDV 760  

                   selverl<-*
                    +l  +    
    KIAA0137   761 HQLANDP    767  

SM00220: domain 1 of 1, from 491 to 769: score 265.0, E = 5.8e-75
                   *->YellkklGkGaFGkVylardkktgrlvAiKvik..............
                      Y ll +lG+G+F++Vy+a d   +r+ A+K+   +++ +++++++ +
    KIAA0137   491    YLLLHLLGRGGFSEVYKAFDLYEQRYAAVKIHQlnkswrdekkenyh 537  

                   erilrEikiLkk.dHPNIVkLydvfed..dklylVmEyceGdlGdLfdll
                   ++++rE +i+k+ dHP IVkLyd+f  ++d ++ V+EyceG   dL  +l
    KIAA0137   538 KHACREYRIHKElDHPRIVKLYDYFSLdtDTFCTVLEYCEG--NDLDFYL 585  

                   kkrgrrglrkvlsE.earfyfrQilsaLeYLHsq..gIiHRDLKPeNiLL
                   k+++       +sE+ear+++ Qi++aL YL + ++ IiH DLKP NiLL
    KIAA0137   586 KQHKL------MSEkEARSIVMQIVNALRYLNEIkpPIIHYDLKPGNILL 629  

                   ds.....hvKlaDFGlArql.............ttfvGTpeYmAPEvl..
                    +++  +++K++DFGl++++++++ + ++ + ++   GT +Y++PE +  
    KIAA0137   630 VDgtacgEIKITDFGLSKIMdddsygvdgmdltSQGAGTYWYLPPECFvv 679  

                   .....gYgkpavDiWSlGcilyElltGkpPFp.........qldlifkki
                   ++++++ +  +vD+WS+G+i++ +l+G+ PF +++++++  q+++i+k  
    KIAA0137   680 gkeppKISN-KVDVWSVGVIFFQCLYGRKPFGhnqsqqdilQENTILKAT 728  

                   g.........SpeakdLikklLvkdPekRlta.eaLedeldikaHPff<-
                       + ++  S+eak +i+++L +  e+R  ++++ +       +P++  
    KIAA0137   729 EvqfpvkpvvSSEAKAFIRRCLAYRKEDRFDVhQLAN-------DPYL   769  

                   *
                    
    KIAA0137     -   -    

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