hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-18132020/chunk_1/iprscan-20080501-18132020.nocrc
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Query sequence: KIAA0131
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00324                                                 231.0      1e-64   1
SM00055                                                  96.0    4.4e-24   1
SM00326                                                  76.3    3.8e-18   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00055    1/1      18   120 ..     1   103 []    96.0  4.4e-24
SM00324    1/1     514   688 ..     1   193 []   231.0    1e-64
SM00326    1/1     745   800 ..     1    58 []    76.3  3.8e-18

Alignments of top-scoring domains:
SM00055: domain 1 of 1, from 18 to 120: score 96.0, E = 4.4e-24
                   *->mgfwselwsddGfeaLlsrlknglrlledlkkflreRakiEeeYAkk
                      ++++++l   +++++L+ + +  ++ll++l++f+r+Ra++E eY+++
    KIAA0131    18    KEMRWQL--SEQLRCLELQGELRRELLQELAEFMRRRAEVELEYSRG 62   

                   Lqklskkyfnkks...svgdlravreteselgslkkswevllsetdalak
                   L kl++++++++++ +s+++++++r+ +s l++l ++w+vll++t+++++
    KIAA0131    63 LEKLAERFSSRGGrlgSSREHQSFRKEPSLLSPL-HCWAVLLQHTRQQSR 111  

                   shlqlsedL<-*
                       lse L   
    KIAA0131   112 ESAALSEVL    120  

SM00324: domain 1 of 1, from 514 to 688: score 231.0, E = 1e-64
                   *->spiPiivekCieylekrGldteGIYRvsGsksrvkeLreafdsged.
                      +p+P++ve+Ci+++  +Gl+ eGI+RvsG + rv e+r+af++ged+
    KIAA0131   514    QPVPLVVESCIRFINLNGLQHEGIFRVSGAQLRVSEIRDAFERGEDp 560  

                   dldsldesiteesedleeydvhdvAglLKlyLReLPePLltfelyeefie
                               +e +  +d  +vAg+LKly+R+L  PL++++l++e++ 
    KIAA0131   561 L-----------VEGCTAHDLDSVAGVLKLYFRSLEPPLFPPDLFGELLA 599  

                   aaklyqieatsrkqseksedeeerlralrellslLPpanratLryLl.HL
                    ++l              e + er++++ +ll +LP + + +LryL+++L
    KIAA0131   600 SSEL--------------EATAERVEHVSRLLWRLPAPVLVVLRYLFtFL 635  

                   nrVaehsevNkMtarNLAivFgPtLlrpp.....ltdikhqnkvvetlie
                   n++a++s++N+M++ NLA++FgPtLl  p +++++++   +n++v+tli+
    KIAA0131   636 NHLAQYSDENMMDPYNLAVCFGPTLLPVPagqdpVALQGRVNQLVQTLIV 685  

                   nad<-*
                   ++d   
    KIAA0131   686 QPD    688  

SM00326: domain 1 of 1, from 745 to 800: score 76.3, E = 3.8e-18
                   *->eyvvAlYDyeaqnedELsFkkGDiitvleksddgWweGelnrtGkeG
                      +++vA ++y++++++ELsF++GD+++++e+ +++Ww+Ge+n  G +G
    KIAA0131   745    VEAVACFAYTGRTAQELSFRRGDVLRLHERASSDWWRGEHN--GMRG 789  

                   lfPsnYVeeie<-*
                   l+P+ Y+++     
    KIAA0131   790 LIPHKYITLPA    800  

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