hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-18064928/chunk_1/iprscan-20080501-18064928.nocrc
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Query sequence: KIAA0127
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF06031.4.fs SERTA motif                                     80.1      2e-22   1
PF06031.4.ls SERTA motif                                     82.1    1.6e-21   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF06031.4.fs   1/1      41    78 ..     1    38 []    80.1    2e-22
PF06031.4.ls   1/1      41    78 ..     1    38 []    82.1  1.6e-21

Alignments of top-scoring domains:
PF06031.4.fs: domain 1 of 1, from 41 to 78: score 80.1, E = 2e-22
                   *->iLdlSlvKLqrirdlsEpsLrRsVLInNTLrRIqeEle<-*
                      i+++Sl+KL+++r+l+EpsL+++VLInN+LrRIqeEl+   
    KIAA0127    41    IFNISLMKLYNHRPLTEPSLQKTVLINNMLRRIQEELK    78   

PF06031.4.ls: domain 1 of 1, from 41 to 78: score 82.1, E = 1.6e-21
                   *->iLdlSlvKLqrirdlsEpsLrRsVLInNTLrRIqeEle<-*
                      i+++Sl+KL+++r+l+EpsL+++VLInN+LrRIqeEl+   
    KIAA0127    41    IFNISLMKLYNHRPLTEPSLQKTVLINNMLRRIQEELK    78   

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