hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-18051150/chunk_1/iprscan-20080501-18051150.nocrc
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Query sequence: KIAA0126
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00504                                                 107.4    1.6e-27   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00504    1/1    1000  1063 ..     1    72 []   107.4  1.6e-27

Alignments of top-scoring domains:
SM00504: domain 1 of 1, from 1000 to 1063: score 107.4, E = 1.6e-27
                   *->eFiCPIslevMeDPVilpsGKgqTyERraIekwlksgGrhgtcPvTg
                      eF++PI+ ++M+DPV+lps+ ++T +R++I ++l+s+   +t+P+++
    KIAA0126  1000    EFLDPIMSTLMCDPVVLPSS-RVTVDRSTIARHLLSD---QTDPFNR 1042 

                   qpLpthedLiPnKtglalKslIqew<-*
                   +pL t +++ Pn    +lK++Iq w   
    KIAA0126  1043 SPL-TMDQIRPN---TELKEKIQRW    1063 

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