# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/ha01523s1.fasta.nr -Q ../query/KIAA0123.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA0123, 528 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7824607 sequences Expectation_n fit: rho(ln(x))= 5.2941+/-0.000182; mu= 11.3516+/- 0.010 mean_var=71.1576+/-13.981, 0's: 31 Z-trim: 50 B-trim: 0 in 0/66 Lambda= 0.152042 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|48257293|gb|AAH33103.2| PMPCA protein [Homo sap ( 526) 3474 771.2 0 gi|29840846|sp|Q10713.2|MPPA_HUMAN RecName: Full=M ( 525) 3468 769.9 0 gi|18605506|gb|AAH22949.1| PMPCA protein [Homo sap ( 521) 3435 762.6 0 gi|85700444|sp|Q5R513.2|MPPA_PONAB RecName: Full=M ( 525) 3435 762.6 0 gi|55732931|emb|CAH93153.1| hypothetical protein [ ( 525) 3429 761.3 0 gi|122145345|sp|Q0P5M8.1|MPPA_BOVIN RecName: Full= ( 525) 3225 716.6 4.3e-204 gi|51261241|gb|AAH79004.1| Peptidase (mitochondria ( 524) 3224 716.3 5e-204 gi|14548120|sp|Q9DC61.1|MPPA_MOUSE RecName: Full=M ( 524) 3201 711.3 1.6e-202 gi|194226020|ref|XP_001498584.2| PREDICTED: peptid ( 531) 3199 710.9 2.3e-202 gi|57091999|ref|XP_537796.1| PREDICTED: similar to ( 526) 3198 710.6 2.6e-202 gi|74148289|dbj|BAE36299.1| unnamed protein produc ( 524) 3190 708.9 8.8e-202 gi|74186550|dbj|BAE34758.1| unnamed protein produc ( 519) 3180 706.7 4e-201 gi|126302715|ref|XP_001372865.1| PREDICTED: simila ( 627) 3102 689.6 6.5e-196 gi|127287|sp|P20069.1|MPPA_RAT RecName: Full=Mitoc ( 524) 2952 656.7 4.5e-186 gi|149460565|ref|XP_001521013.1| PREDICTED: hypoth ( 513) 2934 652.7 6.9e-185 gi|53133830|emb|CAG32244.1| hypothetical protein [ ( 519) 2893 643.7 3.6e-182 gi|67678243|gb|AAH97637.1| MGC114896 protein [Xeno ( 518) 2862 636.9 3.9e-180 gi|74211961|dbj|BAE29321.1| unnamed protein produc ( 464) 2836 631.2 1.9e-178 gi|220673190|emb|CAX14225.1| peptidase (mitochondr ( 517) 2769 616.5 5.5e-174 gi|55250627|gb|AAH85400.1| Peptidase (mitochondria ( 517) 2760 614.6 2.1e-173 gi|149039281|gb|EDL93501.1| peptidase (mitochondri ( 487) 2588 576.8 4.7e-162 gi|123228054|emb|CAM20314.1| peptidase (mitochondr ( 441) 2581 575.2 1.2e-161 gi|26346078|dbj|BAC36690.1| unnamed protein produc ( 441) 2575 573.9 3.1e-161 gi|194383734|dbj|BAG59225.1| unnamed protein produ ( 394) 2315 516.9 4.2e-144 gi|210128587|gb|EEA76264.1| hypothetical protein B ( 520) 2242 500.9 3.4e-139 gi|215502684|gb|EEC12178.1| mitochondrial processi ( 530) 1957 438.4 2.3e-120 gi|198419079|ref|XP_002119957.1| PREDICTED: simila ( 524) 1871 419.6 1.1e-114 gi|212515675|gb|EEB17780.1| mitochondrial-processi ( 556) 1843 413.4 8.1e-113 gi|156545665|ref|XP_001604153.1| PREDICTED: simila ( 542) 1828 410.1 7.7e-112 gi|210128444|gb|EEA76121.1| hypothetical protein B ( 509) 1825 409.5 1.2e-111 gi|91091652|ref|XP_971071.1| PREDICTED: similar to ( 529) 1821 408.6 2.2e-111 gi|108882534|gb|EAT46759.1| mitochondrial processi ( 546) 1781 399.8 9.9e-109 gi|157015024|gb|EAA12324.3| AGAP008086-PA [Anophel ( 510) 1776 398.7 2e-108 gi|190622288|gb|EDV37812.1| GF11230 [Drosophila an ( 555) 1767 396.8 8.4e-108 gi|190662419|gb|EDV59611.1| GG10696 [Drosophila er ( 556) 1759 395.0 2.8e-107 gi|194175647|gb|EDW89258.1| GE23498 [Drosophila ya ( 556) 1753 393.7 7.1e-107 gi|194192517|gb|EDX06093.1| GD10210 [Drosophila si ( 556) 1748 392.6 1.5e-106 gi|194124799|gb|EDW46842.1| GM20744 [Drosophila se ( 556) 1748 392.6 1.5e-106 gi|7304131|gb|AAF59168.1| CG8728 [Drosophila melan ( 556) 1744 391.7 2.8e-106 gi|193902331|gb|EDW01198.1| GH20583 [Drosophila gr ( 555) 1741 391.1 4.4e-106 gi|194159640|gb|EDW74541.1| GK21348 [Drosophila wi ( 559) 1737 390.2 8.1e-106 gi|193909277|gb|EDW08144.1| GI19728 [Drosophila mo ( 554) 1736 390.0 9.4e-106 gi|194110504|gb|EDW32547.1| GL10384 [Drosophila pe ( 555) 1724 387.3 5.8e-105 gi|54636645|gb|EAL26048.1| GA21285 [Drosophila pse ( 555) 1724 387.3 5.8e-105 gi|156217996|gb|EDO38902.1| predicted protein [Nem ( 487) 1692 380.3 6.8e-103 gi|198137688|gb|EDY69755.1| GA25237 [Drosophila ps ( 820) 1615 363.5 1.3e-97 gi|198137686|gb|EDY69753.1| GA25238 [Drosophila ps ( 820) 1613 363.1 1.7e-97 gi|194114983|gb|EDW37026.1| GL26015 [Drosophila pe ( 820) 1606 361.6 4.9e-97 gi|193659740|ref|XP_001945676.1| PREDICTED: simila ( 523) 1593 358.6 2.5e-96 gi|158599254|gb|EDP36925.1| Peptidase M16 inactive ( 504) 1523 343.2 1e-91 >>gi|48257293|gb|AAH33103.2| PMPCA protein [Homo sapiens (526 aa) initn: 3474 init1: 3474 opt: 3474 Z-score: 4115.5 bits: 771.2 E(): 0 Smith-Waterman score: 3474; 100.000% identity (100.000% similar) in 526 aa overlap (3-528:1-526) 10 20 30 40 50 60 KIAA01 RRKMAAVVLAATRLLRGSGSWGCSRLRFGPPAYRRFSSGGAYPNIPLSSPLPGVPKPVFA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|482 KMAAVVLAATRLLRGSGSWGCSRLRFGPPAYRRFSSGGAYPNIPLSSPLPGVPKPVFA 10 20 30 40 50 70 80 90 100 110 120 KIAA01 TVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|482 TVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAF 60 70 80 90 100 110 130 140 150 160 170 180 KIAA01 SSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVALLADVVLQPRLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|482 SSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVALLADVVLQPRLT 120 130 140 150 160 170 190 200 210 220 230 240 KIAA01 DEEVEMTRMAVQFELEDLNLRPDPEPLLTEMIHEAAYRENTVGLHRFCPTENVAKINREV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|482 DEEVEMTRMAVQFELEDLNLRPDPEPLLTEMIHEAAYRENTVGLHRFCPTENVAKINREV 180 190 200 210 220 230 250 260 270 280 290 300 KIAA01 LHSYLRNYYTPDRMVLAGVGVEHEHLVDCARKYLLGVQPAWGSAEAVDIDRSVAQYTGGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|482 LHSYLRNYYTPDRMVLAGVGVEHEHLVDCARKYLLGVQPAWGSAEAVDIDRSVAQYTGGI 240 250 260 270 280 290 310 320 330 340 350 360 KIAA01 AKLERDMSNVSLGPTPIPELTHIMVGLESCSFLEEDFIPFAVLNMMMGGGGSFSAGGPGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|482 AKLERDMSNVSLGPTPIPELTHIMVGLESCSFLEEDFIPFAVLNMMMGGGGSFSAGGPGK 300 310 320 330 340 350 370 380 390 400 410 420 KIAA01 GMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|482 GMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGG 360 370 380 390 400 410 430 440 450 460 470 480 KIAA01 TVDTVELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPHELCTLIRNVKPEDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|482 TVDTVELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPHELCTLIRNVKPEDV 420 430 440 450 460 470 490 500 510 520 KIAA01 KRVASKMLRGKPAVAALGDLTDLPTYEHIQTALSSKDGRLPRTYRLFR :::::::::::::::::::::::::::::::::::::::::::::::: gi|482 KRVASKMLRGKPAVAALGDLTDLPTYEHIQTALSSKDGRLPRTYRLFR 480 490 500 510 520 >>gi|29840846|sp|Q10713.2|MPPA_HUMAN RecName: Full=Mitoc (525 aa) initn: 3468 init1: 3468 opt: 3468 Z-score: 4108.4 bits: 769.9 E(): 0 Smith-Waterman score: 3468; 100.000% identity (100.000% similar) in 525 aa overlap (4-528:1-525) 10 20 30 40 50 60 KIAA01 RRKMAAVVLAATRLLRGSGSWGCSRLRFGPPAYRRFSSGGAYPNIPLSSPLPGVPKPVFA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|298 MAAVVLAATRLLRGSGSWGCSRLRFGPPAYRRFSSGGAYPNIPLSSPLPGVPKPVFA 10 20 30 40 50 70 80 90 100 110 120 KIAA01 TVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|298 TVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAF 60 70 80 90 100 110 130 140 150 160 170 180 KIAA01 SSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVALLADVVLQPRLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|298 SSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVALLADVVLQPRLT 120 130 140 150 160 170 190 200 210 220 230 240 KIAA01 DEEVEMTRMAVQFELEDLNLRPDPEPLLTEMIHEAAYRENTVGLHRFCPTENVAKINREV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|298 DEEVEMTRMAVQFELEDLNLRPDPEPLLTEMIHEAAYRENTVGLHRFCPTENVAKINREV 180 190 200 210 220 230 250 260 270 280 290 300 KIAA01 LHSYLRNYYTPDRMVLAGVGVEHEHLVDCARKYLLGVQPAWGSAEAVDIDRSVAQYTGGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|298 LHSYLRNYYTPDRMVLAGVGVEHEHLVDCARKYLLGVQPAWGSAEAVDIDRSVAQYTGGI 240 250 260 270 280 290 310 320 330 340 350 360 KIAA01 AKLERDMSNVSLGPTPIPELTHIMVGLESCSFLEEDFIPFAVLNMMMGGGGSFSAGGPGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|298 AKLERDMSNVSLGPTPIPELTHIMVGLESCSFLEEDFIPFAVLNMMMGGGGSFSAGGPGK 300 310 320 330 340 350 370 380 390 400 410 420 KIAA01 GMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|298 GMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGG 360 370 380 390 400 410 430 440 450 460 470 480 KIAA01 TVDTVELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPHELCTLIRNVKPEDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|298 TVDTVELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPHELCTLIRNVKPEDV 420 430 440 450 460 470 490 500 510 520 KIAA01 KRVASKMLRGKPAVAALGDLTDLPTYEHIQTALSSKDGRLPRTYRLFR :::::::::::::::::::::::::::::::::::::::::::::::: gi|298 KRVASKMLRGKPAVAALGDLTDLPTYEHIQTALSSKDGRLPRTYRLFR 480 490 500 510 520 >>gi|18605506|gb|AAH22949.1| PMPCA protein [Homo sapiens (521 aa) initn: 3435 init1: 3435 opt: 3435 Z-score: 4069.4 bits: 762.6 E(): 0 Smith-Waterman score: 3435; 99.808% identity (99.808% similar) in 521 aa overlap (8-528:1-521) 10 20 30 40 50 60 KIAA01 RRKMAAVVLAATRLLRGSGSWGCSRLRFGPPAYRRFSSGGAYPNIPLSSPLPGVPKPVFA ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 VLAATRLLRGSGSWGCSRLRFGPPAYRRFSSGGAYPNIPLSSPLPGVPKPVFA 10 20 30 40 50 70 80 90 100 110 120 KIAA01 TVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 TVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAF 60 70 80 90 100 110 130 140 150 160 170 180 KIAA01 SSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVALLADVVLQPRLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 SSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVALLADVVLQPRLT 120 130 140 150 160 170 190 200 210 220 230 240 KIAA01 DEEVEMTRMAVQFELEDLNLRPDPEPLLTEMIHEAAYRENTVGLHRFCPTENVAKINREV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 DEEVEMTRMAVQFELEDLNLRPDPEPLLTEMIHEAAYRENTVGLHRFCPTENVAKINREV 180 190 200 210 220 230 250 260 270 280 290 300 KIAA01 LHSYLRNYYTPDRMVLAGVGVEHEHLVDCARKYLLGVQPAWGSAEAVDIDRSVAQYTGGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 LHSYLRNYYTPDRMVLAGVGVEHEHLVDCARKYLLGVQPAWGSAEAVDIDRSVAQYTGGI 240 250 260 270 280 290 310 320 330 340 350 360 KIAA01 AKLERDMSNVSLGPTPIPELTHIMVGLESCSFLEEDFIPFAVLNMMMGGGGSFSAGGPGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 AKLERDMSNVSLGPTPIPELTHIMVGLESCSFLEEDFIPFAVLNMMMGGGGSFSAGGPGK 300 310 320 330 340 350 370 380 390 400 410 420 KIAA01 GMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 GMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGG 360 370 380 390 400 410 430 440 450 460 470 480 KIAA01 TVDTVELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPHELCTLIRNVKPEDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 TVDTVELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPHELCTLIRNVKPEDV 420 430 440 450 460 470 490 500 510 520 KIAA01 KRVASKMLRGKPAVAALGDLTDLPTYEHIQTALSSKDGRLPRTYRLFR ::::::::::::::::: :::::::::::::::::::::::::::::: gi|186 KRVASKMLRGKPAVAALCDLTDLPTYEHIQTALSSKDGRLPRTYRLFR 480 490 500 510 520 >>gi|85700444|sp|Q5R513.2|MPPA_PONAB RecName: Full=Mitoc (525 aa) initn: 3435 init1: 3435 opt: 3435 Z-score: 4069.3 bits: 762.6 E(): 0 Smith-Waterman score: 3435; 98.667% identity (99.810% similar) in 525 aa overlap (4-528:1-525) 10 20 30 40 50 60 KIAA01 RRKMAAVVLAATRLLRGSGSWGCSRLRFGPPAYRRFSSGGAYPNIPLSSPLPGVPKPVFA ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|857 MAAVVLAATRLLRGSGSWGCSRLRFGPPAYRRFSSGGAYPNIPLSSPLPGVPKPVFA 10 20 30 40 50 70 80 90 100 110 120 KIAA01 TVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|857 TVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAF 60 70 80 90 100 110 130 140 150 160 170 180 KIAA01 SSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVALLADVVLQPRLT :::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::: gi|857 SSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVGLLADVVLQPRLT 120 130 140 150 160 170 190 200 210 220 230 240 KIAA01 DEEVEMTRMAVQFELEDLNLRPDPEPLLTEMIHEAAYRENTVGLHRFCPTENVAKINREV :::::::::.::::::::::::::::::::::::::::::::::::::::::.::::::: gi|857 DEEVEMTRMTVQFELEDLNLRPDPEPLLTEMIHEAAYRENTVGLHRFCPTENIAKINREV 180 190 200 210 220 230 250 260 270 280 290 300 KIAA01 LHSYLRNYYTPDRMVLAGVGVEHEHLVDCARKYLLGVQPAWGSAEAVDIDRSVAQYTGGI ::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|857 LHSYLRNYYTPDRMVLAGVGVEHEHLVDCARKYLLGIQPAWGSAEAVDIDRSVAQYTGGI 240 250 260 270 280 290 310 320 330 340 350 360 KIAA01 AKLERDMSNVSLGPTPIPELTHIMVGLESCSFLEEDFIPFAVLNMMMGGGGSFSAGGPGK :: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|857 AKRERDMSNVSLGPTPIPELTHIMVGLESCSFLEEDFIPFAVLNMMMGGGGSFSAGGPGK 300 310 320 330 340 350 370 380 390 400 410 420 KIAA01 GMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|857 GMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMSG 360 370 380 390 400 410 430 440 450 460 470 480 KIAA01 TVDTVELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPHELCTLIRNVKPEDV :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|857 TVDAVELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPHELCTLIRNVKPEDV 420 430 440 450 460 470 490 500 510 520 KIAA01 KRVASKMLRGKPAVAALGDLTDLPTYEHIQTALSSKDGRLPRTYRLFR :::::::::::::::::::::::::::::::::::::::::::::::: gi|857 KRVASKMLRGKPAVAALGDLTDLPTYEHIQTALSSKDGRLPRTYRLFR 480 490 500 510 520 >>gi|55732931|emb|CAH93153.1| hypothetical protein [Pong (525 aa) initn: 3429 init1: 3429 opt: 3429 Z-score: 4062.2 bits: 761.3 E(): 0 Smith-Waterman score: 3429; 98.667% identity (99.810% similar) in 525 aa overlap (4-528:1-525) 10 20 30 40 50 60 KIAA01 RRKMAAVVLAATRLLRGSGSWGCSRLRFGPPAYRRFSSGGAYPNIPLSSPLPGVPKPVFA ::::::::::::::::::: ::::::::::::::::::::::::::::::::::::: gi|557 MAAVVLAATRLLRGSGSWGSSRLRFGPPAYRRFSSGGAYPNIPLSSPLPGVPKPVFA 10 20 30 40 50 70 80 90 100 110 120 KIAA01 TVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 TVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAF 60 70 80 90 100 110 130 140 150 160 170 180 KIAA01 SSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVALLADVVLQPRLT :::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::: gi|557 SSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVGLLADVVLQPRLT 120 130 140 150 160 170 190 200 210 220 230 240 KIAA01 DEEVEMTRMAVQFELEDLNLRPDPEPLLTEMIHEAAYRENTVGLHRFCPTENVAKINREV :::::::::.::::::::::::::::::::::::::::::::::::::::::.::::::: gi|557 DEEVEMTRMTVQFELEDLNLRPDPEPLLTEMIHEAAYRENTVGLHRFCPTENIAKINREV 180 190 200 210 220 230 250 260 270 280 290 300 KIAA01 LHSYLRNYYTPDRMVLAGVGVEHEHLVDCARKYLLGVQPAWGSAEAVDIDRSVAQYTGGI ::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|557 LHSYLRNYYTPDRMVLAGVGVEHEHLVDCARKYLLGIQPAWGSAEAVDIDRSVAQYTGGI 240 250 260 270 280 290 310 320 330 340 350 360 KIAA01 AKLERDMSNVSLGPTPIPELTHIMVGLESCSFLEEDFIPFAVLNMMMGGGGSFSAGGPGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 AKLERDMSNVSLGPTPIPELTHIMVGLESCSFLEEDFIPFAVLNMMMGGGGSFSAGGPGK 300 310 320 330 340 350 370 380 390 400 410 420 KIAA01 GMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|557 GMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMSG 360 370 380 390 400 410 430 440 450 460 470 480 KIAA01 TVDTVELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPHELCTLIRNVKPEDV :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 TVDAVELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPHELCTLIRNVKPEDV 420 430 440 450 460 470 490 500 510 520 KIAA01 KRVASKMLRGKPAVAALGDLTDLPTYEHIQTALSSKDGRLPRTYRLFR :::::::::::::::::::::::::::::::::::::::::::::::: gi|557 KRVASKMLRGKPAVAALGDLTDLPTYEHIQTALSSKDGRLPRTYRLFR 480 490 500 510 520 >>gi|122145345|sp|Q0P5M8.1|MPPA_BOVIN RecName: Full=Mito (525 aa) initn: 3225 init1: 3225 opt: 3225 Z-score: 3820.4 bits: 716.6 E(): 4.3e-204 Smith-Waterman score: 3225; 90.667% identity (98.286% similar) in 525 aa overlap (4-528:1-525) 10 20 30 40 50 60 KIAA01 RRKMAAVVLAATRLLRGSGSWGCSRLRFGPPAYRRFSSGGAYPNIPLSSPLPGVPKPVFA :::.::::::::::::::: :: ::: :::::::::::::::::::::::::::::: gi|122 MAAMVLAATRLLRGSGSWGRSRPRFGDPAYRRFSSGGAYPNIPLSSPLPGVPKPVFA 10 20 30 40 50 70 80 90 100 110 120 KIAA01 TVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|122 TVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAF 60 70 80 90 100 110 130 140 150 160 170 180 KIAA01 SSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVALLADVVLQPRLT ::: :::::::::::::::::::::::::::::::::::::::::::.:::::::.:::: gi|122 SSTERFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVGLLADVVLHPRLT 120 130 140 150 160 170 190 200 210 220 230 240 KIAA01 DEEVEMTRMAVQFELEDLNLRPDPEPLLTEMIHEAAYRENTVGLHRFCPTENVAKINREV :::.::.::::::::::::.:::::::::::.:::::::::::::::::.:::.:..:.: gi|122 DEEIEMARMAVQFELEDLNMRPDPEPLLTEMVHEAAYRENTVGLHRFCPAENVGKMDRDV 180 190 200 210 220 230 250 260 270 280 290 300 KIAA01 LHSYLRNYYTPDRMVLAGVGVEHEHLVDCARKYLLGVQPAWGSAEAVDIDRSVAQYTGGI ::.:::::::::::::::::::: .::.::::::::. ::::.. :: .::::::::::: gi|122 LHAYLRNYYTPDRMVLAGVGVEHAQLVECARKYLLGTCPAWGTGAAVHVDRSVAQYTGGI 240 250 260 270 280 290 310 320 330 340 350 360 KIAA01 AKLERDMSNVSLGPTPIPELTHIMVGLESCSFLEEDFIPFAVLNMMMGGGGSFSAGGPGK .:::::::::::::::.:::::::.::::::::: ::::::::::::::::::::::::: gi|122 VKLERDMSNVSLGPTPFPELTHIMIGLESCSFLEGDFIPFAVLNMMMGGGGSFSAGGPGK 300 310 320 330 340 350 370 380 390 400 410 420 KIAA01 GMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGG :::.::::::::::::::::::::::::::::::::::::::::::::::.:.::.::.: gi|122 GMFTRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIVTREFVLMAG 360 370 380 390 400 410 430 440 450 460 470 480 KIAA01 TVDTVELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPHELCTLIRNVKPEDV :::.:::::::::::::::::::.:::::::::::::::::::::::::.:::.:::::. gi|122 TVDVVELERAKTQLTSMLMMNLEARPVIFEDVGRQVLATRSRKLPHELCALIRDVKPEDI 420 430 440 450 460 470 490 500 510 520 KIAA01 KRVASKMLRGKPAVAALGDLTDLPTYEHIQTALSSKDGRLPRTYRLFR ::::::::::::::::::::..::.:::.:.::.:.::::::.::::: gi|122 KRVASKMLRGKPAVAALGDLSELPAYEHVQAALASRDGRLPRVYRLFR 480 490 500 510 520 >>gi|51261241|gb|AAH79004.1| Peptidase (mitochondrial pr (524 aa) initn: 3224 init1: 3175 opt: 3224 Z-score: 3819.2 bits: 716.3 E(): 5e-204 Smith-Waterman score: 3224; 92.000% identity (97.714% similar) in 525 aa overlap (4-528:1-524) 10 20 30 40 50 60 KIAA01 RRKMAAVVLAATRLLRGSGSWGCSRLRFGPPAYRRFSSGGAYPNIPLSSPLPGVPKPVFA ::..: ::.::::::.. :.: .:: ::.::::::..::::::::::::::::.:: gi|512 MATAVWAAARLLRGSAAL-CARPKFGSPAHRRFSSGATYPNIPLSSPLPGVPKPIFA 10 20 30 40 50 70 80 90 100 110 120 KIAA01 TVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAF ::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::: gi|512 TVDGQEKFETKVTTLDNGLRVASQNKFGQFCTLGILINSGSRYEAKYLSGIAHFLEKLAF 60 70 80 90 100 110 130 140 150 160 170 180 KIAA01 SSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVALLADVVLQPRLT :::::::::::::::::::::::::::::::::::::::::::::::.:::::::.:::: gi|512 SSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVGLLADVVLHPRLT 120 130 140 150 160 170 190 200 210 220 230 240 KIAA01 DEEVEMTRMAVQFELEDLNLRPDPEPLLTEMIHEAAYRENTVGLHRFCPTENVAKINREV :::.:::::::::::::::.::::::::::::::::.::::::::::::.::..::.::: gi|512 DEEIEMTRMAVQFELEDLNMRPDPEPLLTEMIHEAAFRENTVGLHRFCPVENIGKIDREV 180 190 200 210 220 230 250 260 270 280 290 300 KIAA01 LHSYLRNYYTPDRMVLAGVGVEHEHLVDCARKYLLGVQPAWGSAEAVDIDRSVAQYTGGI :::::.:::::::::::::::::::::.::::::::::::::. :::.: ::::::::: gi|512 LHSYLKNYYTPDRMVLAGVGVEHEHLVECARKYLLGVQPAWGAPGAVDVDSSVAQYTGGI 240 250 260 270 280 290 310 320 330 340 350 360 KIAA01 AKLERDMSNVSLGPTPIPELTHIMVGLESCSFLEEDFIPFAVLNMMMGGGGSFSAGGPGK :.::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|512 IKVERDMSNVSLGPTPIPELTHIMVGLESCSFLEEDFIPFAVLNMMMGGGGSFSAGGPGK 300 310 320 330 340 350 370 380 390 400 410 420 KIAA01 GMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|512 GMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGR 360 370 380 390 400 410 430 440 450 460 470 480 KIAA01 TVDTVELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPHELCTLIRNVKPEDV ::: :::::::::: ::::::::::::::::::::::::.:::::::::::::::::::. gi|512 TVDLVELERAKTQLMSMLMMNLESRPVIFEDVGRQVLATHSRKLPHELCTLIRNVKPEDI 420 430 440 450 460 470 490 500 510 520 KIAA01 KRVASKMLRGKPAVAALGDLTDLPTYEHIQTALSSKDGRLPRTYRLFR ::::::::::::::::::::::::::::::.::::.:::::::::::: gi|512 KRVASKMLRGKPAVAALGDLTDLPTYEHIQAALSSRDGRLPRTYRLFR 480 490 500 510 520 >>gi|14548120|sp|Q9DC61.1|MPPA_MOUSE RecName: Full=Mitoc (524 aa) initn: 3203 init1: 3155 opt: 3201 Z-score: 3791.9 bits: 711.3 E(): 1.6e-202 Smith-Waterman score: 3201; 91.238% identity (97.524% similar) in 525 aa overlap (4-528:1-524) 10 20 30 40 50 60 KIAA01 RRKMAAVVLAATRLLRGSGSWGCSRLRFGPPAYRRFSSGGAYPNIPLSSPLPGVPKPVFA ::..: ::.::::::. :.: ::: ::.::::::..::::::::::::::::.:: gi|145 MATAVWAAARLLRGSAVL-CARPRFGSPAHRRFSSGATYPNIPLSSPLPGVPKPIFA 10 20 30 40 50 70 80 90 100 110 120 KIAA01 TVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|145 TVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLAF 60 70 80 90 100 110 130 140 150 160 170 180 KIAA01 SSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVALLADVVLQPRLT ::::::::::::::::::::::::::::::::::::::::::::::: :::::::.:::: gi|145 SSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVDLLADVVLHPRLT 120 130 140 150 160 170 190 200 210 220 230 240 KIAA01 DEEVEMTRMAVQFELEDLNLRPDPEPLLTEMIHEAAYRENTVGLHRFCPTENVAKINREV :::.:::::::::::::::.::::::::::::::::.::::::::::::.::.:::.::: gi|145 DEEIEMTRMAVQFELEDLNMRPDPEPLLTEMIHEAAFRENTVGLHRFCPVENIAKIDREV 180 190 200 210 220 230 250 260 270 280 290 300 KIAA01 LHSYLRNYYTPDRMVLAGVGVEHEHLVDCARKYLLGVQPAWGSAEAVDIDRSVAQYTGGI :::::.:::::::::::::::::::::.::::::.:..::::. .::.::::::::::: gi|145 LHSYLKNYYTPDRMVLAGVGVEHEHLVECARKYLVGAEPAWGAPGTVDVDRSVAQYTGGI 240 250 260 270 280 290 310 320 330 340 350 360 KIAA01 AKLERDMSNVSLGPTPIPELTHIMVGLESCSFLEEDFIPFAVLNMMMGGGGSFSAGGPGK :.:::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|145 IKVERDMSNVSLGPTPIPELTHIMVGLESCSFLEDDFIPFAVLNMMMGGGGSFSAGGPGK 300 310 320 330 340 350 370 380 390 400 410 420 KIAA01 GMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|145 GMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGR 360 370 380 390 400 410 430 440 450 460 470 480 KIAA01 TVDTVELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPHELCTLIRNVKPEDV ::: :::::::::: ::::::::::::::::::::::::.:::::::::::::::::::. gi|145 TVDLVELERAKTQLMSMLMMNLESRPVIFEDVGRQVLATHSRKLPHELCTLIRNVKPEDI 420 430 440 450 460 470 490 500 510 520 KIAA01 KRVASKMLRGKPAVAALGDLTDLPTYEHIQTALSSKDGRLPRTYRLFR ::::::::::::::::::::::::::::::.::::..:.:::.::::: gi|145 KRVASKMLRGKPAVAALGDLTDLPTYEHIQAALSSRNGHLPRSYRLFR 480 490 500 510 520 >>gi|194226020|ref|XP_001498584.2| PREDICTED: peptidase (531 aa) initn: 3199 init1: 3199 opt: 3199 Z-score: 3789.5 bits: 710.9 E(): 2.3e-202 Smith-Waterman score: 3199; 91.635% identity (96.958% similar) in 526 aa overlap (3-528:6-531) 10 20 30 40 50 KIAA01 RRKMAAVVLAATRLLRGSGSWGCSRLRFGPPAYRRFSSGGAYPNIPLSSPLPGVPKP : ::::::::::::: :::: .::::: :: :.::::::::.::::::::::: : gi|194 MRDEPKCAAVVLAATRLLRGPGSWGGARLRFGAPACRQFSSGGAYPSIPLSSPLPGVPTP 10 20 30 40 50 60 60 70 80 90 100 110 KIAA01 VFATVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEK ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: gi|194 VFATVDGQEKFETKITTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEK 70 80 90 100 110 120 120 130 140 150 160 170 KIAA01 LAFSSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVALLADVVLQP :::::: :: ::::::::::::::::::::::::::::::::::::::::.:::::::.: gi|194 LAFSSTDRFGSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVGLLADVVLHP 130 140 150 160 170 180 180 190 200 210 220 230 KIAA01 RLTDEEVEMTRMAVQFELEDLNLRPDPEPLLTEMIHEAAYRENTVGLHRFCPTENVAKIN ::::::.:::::::::::::::.:::::::::::::::::: :::::::::::::::::. gi|194 RLTDEELEMTRMAVQFELEDLNMRPDPEPLLTEMIHEAAYRGNTVGLHRFCPTENVAKID 190 200 210 220 230 240 240 250 260 270 280 290 KIAA01 REVLHSYLRNYYTPDRMVLAGVGVEHEHLVDCARKYLLGVQPAWGSAEAVDIDRSVAQYT ::::::::::::::::::::.::::: ::.::::::::..:::::..:::.:::::::: gi|194 REVLHSYLRNYYTPDRMVLAAVGVEHSLLVECARKYLLGTRPAWGSGKAVDVDRSVAQYT 250 260 270 280 290 300 300 310 320 330 340 350 KIAA01 GGIAKLERDMSNVSLGPTPIPELTHIMVGLESCSFLEEDFIPFAVLNMMMGGGGSFSAGG :::.:::::::::::::.:.:::::::.::::::::: :::::::::::::::::::::: gi|194 GGIVKLERDMSNVSLGPAPFPELTHIMIGLESCSFLEGDFIPFAVLNMMMGGGGSFSAGG 310 320 330 340 350 360 360 370 380 390 400 410 KIAA01 PGKGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFIL ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 PGKGMFTRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFIL 370 380 390 400 410 420 420 430 440 450 460 470 KIAA01 MGGTVDTVELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPHELCTLIRNVKP :.:::: :::::::::: :::::::::::::::::::::::: :::::.:::.::::::: gi|194 MAGTVDEVELERAKTQLMSMLMMNLESRPVIFEDVGRQVLATCSRKLPQELCALIRNVKP 430 440 450 460 470 480 480 490 500 510 520 KIAA01 EDVKRVASKMLRGKPAVAALGDLTDLPTYEHIQTALSSKDGRLPRTYRLFR ::.:::::.::: ::::::::::::::::::.:.::::::::::::::::: gi|194 EDIKRVASQMLRRKPAVAALGDLTDLPTYEHVQAALSSKDGRLPRTYRLFR 490 500 510 520 530 >>gi|57091999|ref|XP_537796.1| PREDICTED: similar to mit (526 aa) initn: 3187 init1: 3187 opt: 3198 Z-score: 3788.3 bits: 710.6 E(): 2.6e-202 Smith-Waterman score: 3198; 90.114% identity (97.719% similar) in 526 aa overlap (4-528:1-526) 10 20 30 40 50 KIAA01 RRKMAAVVLAATR-LLRGSGSWGCSRLRFGPPAYRRFSSGGAYPNIPLSSPLPGVPKPVF :::.:.::.: :::::::: ::::: : :. :.::.:::::..::::::::::.::: gi|570 MAAMVVAAARVLLRGSGSWRCSRLRSGAPSRRQFSGGGAYPHVPLSSPLPGVPEPVF 10 20 30 40 50 60 70 80 90 100 110 KIAA01 ATVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|570 ATVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSGIAHFLEKLA 60 70 80 90 100 110 120 130 140 150 160 170 KIAA01 FSSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVALLADVVLQPRL :::: ::.::::::::::::::::::::::::::::::::::::::::.:::::::.::: gi|570 FSSTDRFESKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVGLLADVVLHPRL 120 130 140 150 160 170 180 190 200 210 220 230 KIAA01 TDEEVEMTRMAVQFELEDLNLRPDPEPLLTEMIHEAAYRENTVGLHRFCPTENVAKINRE ::.:.:::::::::::::::.::::::::::::::::::::::::::::::::.:::.:: gi|570 TDKEIEMTRMAVQFELEDLNMRPDPEPLLTEMIHEAAYRENTVGLHRFCPTENIAKIDRE 180 190 200 210 220 230 240 250 260 270 280 290 KIAA01 VLHSYLRNYYTPDRMVLAGVGVEHEHLVDCARKYLLGVQPAWGSAEAVDIDRSVAQYTGG ::::::::::::::::::::::::::::.::::::::.::::: .:::.:::::::::: gi|570 VLHSYLRNYYTPDRMVLAGVGVEHEHLVECARKYLLGTQPAWGCEKAVDVDRSVAQYTGG 240 250 260 270 280 290 300 310 320 330 340 350 KIAA01 IAKLERDMSNVSLGPTPIPELTHIMVGLESCSFLEEDFIPFAVLNMMMGGGGSFSAGGPG ..:::::::::::::.:.:::::::.:::::::::::::::::::::::::::::::::: gi|570 VVKLERDMSNVSLGPAPFPELTHIMIGLESCSFLEEDFIPFAVLNMMMGGGGSFSAGGPG 300 310 320 330 340 350 360 370 380 390 400 410 KIAA01 KGMFSRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMG ::::.::::::::::::::::::::::::::::::.:::::::::::::::.:::::::. gi|570 KGMFTRLYLNVLNRHHWMYNATSYHHSYEDTGLLCVHASADPRQVREMVEILTKEFILMA 360 370 380 390 400 410 420 430 440 450 460 470 KIAA01 GTVDTVELERAKTQLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPHELCTLIRNVKPED ::::.:::::::::: ::::::::::::::::::::::::::::::::::.:::.::::: gi|570 GTVDVVELERAKTQLMSMLMMNLESRPVIFEDVGRQVLATRSRKLPHELCALIRSVKPED 420 430 440 450 460 470 480 490 500 510 520 KIAA01 VKRVASKMLRGKPAVAALGDLTDLPTYEHIQTALSSKDGRLPRTYRLFR ..::::.:: ::::::::::. ::.:::::.::::.:::::::::::: gi|570 IRRVASQMLCRKPAVAALGDLSHLPAYEHIQAALSSRDGRLPRTYRLFR 480 490 500 510 520 528 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Tue Mar 3 22:47:07 2009 done: Tue Mar 3 22:51:33 2009 Total Scan time: 1589.920 Total Display time: 0.230 Function used was FASTA [version 34.26.5 April 26, 2007]