hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-17551984/chunk_1/iprscan-20080501-17551984.nocrc
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Query sequence: KIAA0120
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00033                                                  92.7    4.4e-23   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00033    1/1      46   152 ..     1   100 []    92.7  4.4e-23

Alignments of top-scoring domains:
SM00033: domain 1 of 1, from 46 to 152: score 92.7, E = 4.4e-23
                   *->eeeallrWinsll.........kvtnfssdlkDGvvLckLlnslsPa
                       e++l  Wi  + +++ +++++ ++nf+ +lkDG+vLc+L+n+l+P 
    KIAA0120    46    LEQILIQWITTQCrkdvgrpqpGRENFQNWLKDGTVLCELINALYPE 92   

                   gsvdkkk......rfkkleNinlalsfaeklgafLGvgkvvlfdpeDlve
                   g  + kk + ++ +fk++e i ++l++ae++    G+  +++f+++Dl+e
    KIAA0120    93 GQAPVKKiqastmAFKQMEQISQFLQAAERY----GINTTDIFQTVDLWE 138  

                   gnenkklilgviwtLirl<-*
                   g    k++++v+ tL+ l   
    KIAA0120   139 G----KNMACVQRTLMNL    152  

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