hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-17520093/chunk_1/iprscan-20080501-17520093.nocrc
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Query sequence: KIAA0118
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00175                                                 126.6    2.8e-33   1
SM00173                                                  32.9    1.7e-10   1
SM00174                                                 -31.0    8.5e-07   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00174     1/1       1   119 [.     1   180 []   -31.0  8.5e-07
SM00173     1/1       1   119 [.     1   167 []    32.9  1.7e-10
SM00175     1/1       1   119 [.     1   172 []   126.6  2.8e-33

Alignments of top-scoring domains:
SM00174: domain 1 of 1, from 1 to 119: score -31.0, E = 8.5e-07
                   *->lVvVGDGaVGKTCLLisYTtnaFPedYVPTVFENYsadvevpDgkpv
                                                                 gk+v
    KIAA0118     1    -------------------------------------------GKRV 4    

                   nLgLWDTAGQEdYDRLRPLSYPqtDVfLiCFSVdspaSfeNVkeKWyPEv
                   nL+ WDTAGQE +  L P  Y +++  ++ ++++  +Sf+ Vk+ W+ E+
    KIAA0118     5 NLAIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKN-WVKEL 53   

                   khfcPnvPii.LVGtKlDLRnDedtleelsekkqePvtteqGeanskial
                   +    n  ++  VG+K+DL   ++ +   +e ++                
    KIAA0118    54 RKMLGNEICLcIVGNKIDLE--KERHVSIQEAES---------------Y 86   

                   AkeIGAvkYlECSAltqeGvkeVFeeAiraaLnk<-*
                   A ++GA k+  +SA++++G++e F    +  ++    
    KIAA0118    87 AESVGA-KHYHTSAKQNKGIEELFLDLCKRMIET    119  

SM00173: domain 1 of 1, from 1 to 119: score 32.9, E = 1.7e-10
                   *->mreYKlVVlGgGGVGKSALTiQFiqghFvdeYDPTIEDSYrKqieiD
                                                                     
    KIAA0118     -    ----------------------------------------------- -    

                   gevalLDILDTAGQeEFsAMRdqYmRtGeGFlLVYSitsrqSFeeikkfr
                   g+ + L I DTAGQe F A+   Y R+ +G +LVY it+ +SF+ +k+  
    KIAA0118     1 GKRVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWV 50   

                   eqIlRVKdrddvPivLVGNKcDLeneRqVsteEGkeLAkqlncpFlEtSA
                   + +  + ++ ++ + +VGNK DLe eR+Vs +E+++ A++ +++ + tSA
    KIAA0118    51 KELRKMLGN-EICLCIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTSA 99   

                   KerinVdeaFydLVReirks<-*
                   K++  ++e F dL +++      
    KIAA0118   100 KQNKGIEELFLDLCKRMIET    119  

SM00175: domain 1 of 1, from 1 to 119: score 126.6, E = 2.8e-33
                   *->FKiilIGDSGVGKSsLLsRFtddkFsedsksTIGVDFktktievdGk
                                                                   Gk
    KIAA0118     1    ---------------------------------------------GK 2    

                   rvKLQIWDTAGQERFRSiTssYYRGAvGalLVYDiTnreSFenlknWlke
                   rv L IWDTAGQERF+++ + YYR+++Ga+LVYDiT+++SF+++knW+ke
    KIAA0118     3 RVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKE 52   

                   lreyadpppenvvimLVGNKsDLeeqRqVstEeaekficDcAeehgllFi
                   lr++ ++    ++  +VGNK+DLe++R+Vs +eae +    Ae  g + +
    KIAA0118    53 LRKMLGN---EICLCIVGNKIDLEKERHVSIQEAESY----AESVGAKHY 95   

                   fETSAKtntNVeeAFeelakkIlkr<-*
                     TSAK n  +ee F+ l k+++ +   
    KIAA0118    96 -HTSAKQNKGIEELFLDLCKRMIET    119  

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