# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/ha01845.fasta.nr -Q ../query/KIAA0117.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA0117, 227 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7825381 sequences Expectation_n fit: rho(ln(x))= 5.5513+/-0.000192; mu= 7.0277+/- 0.011 mean_var=96.8137+/-19.066, 0's: 44 Z-trim: 46 B-trim: 3057 in 1/66 Lambda= 0.130348 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|119590413|gb|EAW70007.1| RNA binding motif prot ( 225) 1460 284.1 1.2e-74 gi|57013870|sp|P42696.2|RBM34_HUMAN RecName: Full= ( 430) 1413 275.5 9.1e-72 gi|109019946|ref|XP_001102020.1| PREDICTED: RNA bi ( 225) 1384 269.8 2.5e-70 gi|20809545|gb|AAH29451.1| RNA binding motif prote ( 425) 1382 269.6 5.1e-70 gi|158258156|dbj|BAF85051.1| unnamed protein produ ( 425) 1381 269.5 5.8e-70 gi|114573273|ref|XP_514284.2| PREDICTED: RNA bindi ( 425) 1367 266.8 3.6e-69 gi|109019944|ref|XP_001102111.1| PREDICTED: RNA bi ( 427) 1337 261.2 1.8e-67 gi|123211150|emb|CAM28277.1| novel protein [Homo s ( 408) 1271 248.8 9.5e-64 gi|158455018|gb|AAI09867.1| RBM34 protein [Bos tau ( 272) 1133 222.6 4.6e-56 gi|194206109|ref|XP_001915106.1| PREDICTED: simila ( 428) 1083 213.4 4.3e-53 gi|194042563|ref|XP_001925470.1| PREDICTED: simila ( 424) 986 195.2 1.3e-47 gi|73952572|ref|XP_536341.2| PREDICTED: similar to ( 531) 949 188.3 2e-45 gi|56204181|emb|CAI22959.1| novel protein [Homo sa ( 211) 788 157.7 1.3e-36 gi|119590411|gb|EAW70005.1| RNA binding motif prot ( 459) 788 158.0 2.3e-36 gi|76363311|sp|Q8C5L7.1|RBM34_MOUSE RecName: Full= ( 375) 770 154.5 2.1e-35 gi|148679875|gb|EDL11822.1| RNA binding motif prot ( 442) 770 154.6 2.3e-35 gi|76363312|sp|Q5M9F1.1|RBM34_RAT RecName: Full=RN ( 428) 743 149.5 7.7e-34 gi|26348074|dbj|BAC37685.1| unnamed protein produc ( 208) 648 131.3 1.1e-28 gi|148679876|gb|EDL11823.1| RNA binding motif prot ( 432) 648 131.6 1.8e-28 gi|126307226|ref|XP_001378610.1| PREDICTED: hypoth ( 439) 567 116.4 7.2e-24 gi|149638231|ref|XP_001512144.1| PREDICTED: simila ( 527) 507 105.2 2e-20 gi|194042559|ref|XP_001924492.1| PREDICTED: simila ( 127) 488 101.0 8.7e-20 gi|118088184|ref|XP_423974.2| PREDICTED: similar t ( 405) 411 87.0 4.6e-15 gi|49114983|gb|AAH72838.1| LOC443584 protein [Xeno ( 403) 351 75.7 1.1e-11 gi|62185676|gb|AAH92323.1| LOC443584 protein [Xeno ( 414) 351 75.7 1.2e-11 gi|89266850|emb|CAJ83915.1| novel protein containi ( 406) 344 74.4 2.8e-11 gi|49523226|gb|AAH75294.1| MGC88935 protein [Xenop ( 412) 344 74.4 2.9e-11 gi|8809667|dbj|BAA97218.1| unnamed protein product ( 501) 240 54.9 2.6e-05 gi|49900339|gb|AAH75875.1| Zgc:92062 [Danio rerio] ( 411) 230 53.0 8.2e-05 gi|21554835|gb|AAM63703.1| unknown [Arabidopsis th ( 501) 226 52.3 0.00016 gi|159155220|gb|AAI54771.1| Zgc:92062 protein [Dan ( 410) 224 51.9 0.00018 gi|189237665|ref|XP_001812360.1| PREDICTED: simila ( 369) 223 51.6 0.00019 gi|211999841|gb|EEB05501.1| nucleolar protein [Sch ( 437) 220 51.1 0.00031 gi|222833855|gb|EEE72332.1| predicted protein [Pop ( 487) 208 48.9 0.0016 gi|72109079|ref|XP_781943.1| PREDICTED: similar to ( 324) 203 47.8 0.0023 gi|115972648|ref|XP_001177737.1| PREDICTED: simila ( 342) 203 47.8 0.0024 gi|210094770|gb|EEA42945.1| hypothetical protein B ( 542) 197 46.9 0.0074 gi|218511717|sp|Q6BTS9.2|NOP12_DEBHA RecName: Full ( 462) 195 46.5 0.0085 gi|222840859|gb|EEE78406.1| predicted protein [Pop ( 491) 195 46.5 0.0089 >>gi|119590413|gb|EAW70007.1| RNA binding motif protein (225 aa) initn: 1460 init1: 1460 opt: 1460 Z-score: 1496.1 bits: 284.1 E(): 1.2e-74 Smith-Waterman score: 1460; 100.000% identity (100.000% similar) in 225 aa overlap (3-227:1-225) 10 20 30 40 50 60 KIAA01 VRMALEGMSKRKRKRSVQEGENPDDGVRGSPPEDYRLGQVASSLFRGEHHSRGGTGRLAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MALEGMSKRKRKRSVQEGENPDDGVRGSPPEDYRLGQVASSLFRGEHHSRGGTGRLAS 10 20 30 40 50 70 80 90 100 110 120 KIAA01 LFSSLEPQIQPVYVPVPKQTIKKTKRNEEEESTSQIERPLSQEPAKKVKAKKKHTNAEKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LFSSLEPQIQPVYVPVPKQTIKKTKRNEEEESTSQIERPLSQEPAKKVKAKKKHTNAEKK 60 70 80 90 100 110 130 140 150 160 170 180 KIAA01 LADRESALASADLEEEIHQKQGQKRKNSQPGVKVADRKILDDTEDTVVSQRKKIQINQEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LADRESALASADLEEEIHQKQGQKRKNSQPGVKVADRKILDDTEDTVVSQRKKIQINQEE 120 130 140 150 160 170 190 200 210 220 KIAA01 ERLKNERTVFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLVCFIPP ::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ERLKNERTVFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLVCFIPP 180 190 200 210 220 >>gi|57013870|sp|P42696.2|RBM34_HUMAN RecName: Full=RNA- (430 aa) initn: 1435 init1: 1413 opt: 1413 Z-score: 1444.7 bits: 275.5 E(): 9.1e-72 Smith-Waterman score: 1413; 99.545% identity (100.000% similar) in 220 aa overlap (3-222:1-220) 10 20 30 40 50 60 KIAA01 VRMALEGMSKRKRKRSVQEGENPDDGVRGSPPEDYRLGQVASSLFRGEHHSRGGTGRLAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|570 MALEGMSKRKRKRSVQEGENPDDGVRGSPPEDYRLGQVASSLFRGEHHSRGGTGRLAS 10 20 30 40 50 70 80 90 100 110 120 KIAA01 LFSSLEPQIQPVYVPVPKQTIKKTKRNEEEESTSQIERPLSQEPAKKVKAKKKHTNAEKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|570 LFSSLEPQIQPVYVPVPKQTIKKTKRNEEEESTSQIERPLSQEPAKKVKAKKKHTNAEKK 60 70 80 90 100 110 130 140 150 160 170 180 KIAA01 LADRESALASADLEEEIHQKQGQKRKNSQPGVKVADRKILDDTEDTVVSQRKKIQINQEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|570 LADRESALASADLEEEIHQKQGQKRKNSQPGVKVADRKILDDTEDTVVSQRKKIQINQEE 120 130 140 150 160 170 190 200 210 220 KIAA01 ERLKNERTVFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLVCFIPP :::::::::::::::::::::::::::::::::::::::::. gi|570 ERLKNERTVFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLIPAEGTLSKKLAAIKRKIH 180 190 200 210 220 230 gi|570 PDQKNINAYVVFKEESAATQALKRNGAQIADGFRIRVDLASETSSRDKRSVFVGNLPYKV 240 250 260 270 280 290 >>gi|109019946|ref|XP_001102020.1| PREDICTED: RNA bindin (225 aa) initn: 1384 init1: 1384 opt: 1384 Z-score: 1418.9 bits: 269.8 E(): 2.5e-70 Smith-Waterman score: 1384; 93.778% identity (98.222% similar) in 225 aa overlap (3-227:1-225) 10 20 30 40 50 60 KIAA01 VRMALEGMSKRKRKRSVQEGENPDDGVRGSPPEDYRLGQVASSLFRGEHHSRGGTGRLAS ::::::.::::::::.:::::::::::::: :::.::::::: ::::::::::::::. gi|109 MALEGMNKRKRKRSVEEGENPDDGVRGSPPGDYRVGQVASSLCRGEHHSRGGTGRLAA 10 20 30 40 50 70 80 90 100 110 120 KIAA01 LFSSLEPQIQPVYVPVPKQTIKKTKRNEEEESTSQIERPLSQEPAKKVKAKKKHTNAEKK ::::::::::::::::::.:::: :::::::::::::::: ::::::::::::::::::: gi|109 LFSSLEPQIQPVYVPVPKETIKKRKRNEEEESTSQIERPLLQEPAKKVKAKKKHTNAEKK 60 70 80 90 100 110 130 140 150 160 170 180 KIAA01 LADRESALASADLEEEIHQKQGQKRKNSQPGVKVADRKILDDTEDTVVSQRKKIQINQEE ::.:::::::::::::::::::::::::::::::::::::::..:::.:::::::::.:: gi|109 LANRESALASADLEEEIHQKQGQKRKNSQPGVKVADRKILDDVDDTVISQRKKIQINEEE 120 130 140 150 160 170 190 200 210 220 KIAA01 ERLKNERTVFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLVCFIPP ::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ERLKNERTVFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLVCFIPP 180 190 200 210 220 >>gi|20809545|gb|AAH29451.1| RNA binding motif protein 3 (425 aa) initn: 1404 init1: 1382 opt: 1382 Z-score: 1413.3 bits: 269.6 E(): 5.1e-70 Smith-Waterman score: 1382; 99.535% identity (100.000% similar) in 215 aa overlap (8-222:1-215) 10 20 30 40 50 60 KIAA01 VRMALEGMSKRKRKRSVQEGENPDDGVRGSPPEDYRLGQVASSLFRGEHHSRGGTGRLAS ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 MSKRKRKRSVQEGENPDDGVRGSPPEDYRLGQVASSLFRGEHHSRGGTGRLAS 10 20 30 40 50 70 80 90 100 110 120 KIAA01 LFSSLEPQIQPVYVPVPKQTIKKTKRNEEEESTSQIERPLSQEPAKKVKAKKKHTNAEKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 LFSSLEPQIQPVYVPVPKQTIKKTKRNEEEESTSQIERPLSQEPAKKVKAKKKHTNAEKK 60 70 80 90 100 110 130 140 150 160 170 180 KIAA01 LADRESALASADLEEEIHQKQGQKRKNSQPGVKVADRKILDDTEDTVVSQRKKIQINQEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|208 LADRESALASADLEEEIHQKQGQKRKNSQPGVKVADRKILDDTEDTVVSQRKKIQINQEE 120 130 140 150 160 170 190 200 210 220 KIAA01 ERLKNERTVFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLVCFIPP :::::::::::::::::::::::::::::::::::::::::. gi|208 ERLKNERTVFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLIPAEGTLSKKLAAIKRKIH 180 190 200 210 220 230 gi|208 PDQKNINAYVVFKEESAATQALKRNGAQIADGFRIRVDLASETSSRDKRSVFVGNLPYKV 240 250 260 270 280 290 >>gi|158258156|dbj|BAF85051.1| unnamed protein product [ (425 aa) initn: 1403 init1: 1381 opt: 1381 Z-score: 1412.3 bits: 269.5 E(): 5.8e-70 Smith-Waterman score: 1381; 99.070% identity (100.000% similar) in 215 aa overlap (8-222:1-215) 10 20 30 40 50 60 KIAA01 VRMALEGMSKRKRKRSVQEGENPDDGVRGSPPEDYRLGQVASSLFRGEHHSRGGTGRLAS ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 MSKRKRKRSVQEGENPDDGVRGSPPEDYRLGQVASSLFRGEHHSRGGTGRLAS 10 20 30 40 50 70 80 90 100 110 120 KIAA01 LFSSLEPQIQPVYVPVPKQTIKKTKRNEEEESTSQIERPLSQEPAKKVKAKKKHTNAEKK :::::::::::::::::::::::::::::::::::.:::::::::::::::::::::::: gi|158 LFSSLEPQIQPVYVPVPKQTIKKTKRNEEEESTSQVERPLSQEPAKKVKAKKKHTNAEKK 60 70 80 90 100 110 130 140 150 160 170 180 KIAA01 LADRESALASADLEEEIHQKQGQKRKNSQPGVKVADRKILDDTEDTVVSQRKKIQINQEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 LADRESALASADLEEEIHQKQGQKRKNSQPGVKVADRKILDDTEDTVVSQRKKIQINQEE 120 130 140 150 160 170 190 200 210 220 KIAA01 ERLKNERTVFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLVCFIPP :::::::::::::::::::::::::::::::::::::::::. gi|158 ERLKNERTVFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLIPAEGTLSKKLAAIKRKIH 180 190 200 210 220 230 gi|158 PDQKNINAYVVFKEESAATQALKRNGAQIADGFRIRVDLASETSSRDKRSVFVGNLPYKV 240 250 260 270 280 290 >>gi|114573273|ref|XP_514284.2| PREDICTED: RNA binding m (425 aa) initn: 1389 init1: 1367 opt: 1367 Z-score: 1398.0 bits: 266.8 E(): 3.6e-69 Smith-Waterman score: 1367; 98.140% identity (99.535% similar) in 215 aa overlap (8-222:1-215) 10 20 30 40 50 60 KIAA01 VRMALEGMSKRKRKRSVQEGENPDDGVRGSPPEDYRLGQVASSLFRGEHHSRGGTGRLAS :::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|114 MSKRKRKRSVQEGENPDDGVRGSPPEDYRVGQVASSLFRGEHHSRGGTGRLAS 10 20 30 40 50 70 80 90 100 110 120 KIAA01 LFSSLEPQIQPVYVPVPKQTIKKTKRNEEEESTSQIERPLSQEPAKKVKAKKKHTNAEKK ::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|114 LFSSLEPQIQPVYVPVPKETIKKTKRNEEEESTSQIERPLSQEPAKKVKAKKKHTNAEKK 60 70 80 90 100 110 130 140 150 160 170 180 KIAA01 LADRESALASADLEEEIHQKQGQKRKNSQPGVKVADRKILDDTEDTVVSQRKKIQINQEE :::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::: gi|114 LADRESALASADLEEEIHQKQGQKRKNSQPGVKVADRKILDDIEDTVVSQRKKIQINQEE 120 130 140 150 160 170 190 200 210 220 KIAA01 ERLKNERTVFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLVCFIPP :::::::::::::::::::::::::::::::::::::::::. gi|114 ERLKNERTVFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLIPAEGTLSKKLAAIKRKIH 180 190 200 210 220 230 gi|114 PDQKNINAYVVFKEESAATQALKRNGAQIADGFRIRVDLASETSSRDKRSVFVGNLPYKV 240 250 260 270 280 290 >>gi|109019944|ref|XP_001102111.1| PREDICTED: RNA bindin (427 aa) initn: 1363 init1: 1337 opt: 1337 Z-score: 1367.5 bits: 261.2 E(): 1.8e-67 Smith-Waterman score: 1337; 93.182% identity (98.182% similar) in 220 aa overlap (3-222:1-220) 10 20 30 40 50 60 KIAA01 VRMALEGMSKRKRKRSVQEGENPDDGVRGSPPEDYRLGQVASSLFRGEHHSRGGTGRLAS ::::::.::::::::.:::::::::::::: :::.::::::: ::::::::::::::. gi|109 MALEGMNKRKRKRSVEEGENPDDGVRGSPPGDYRVGQVASSLCRGEHHSRGGTGRLAA 10 20 30 40 50 70 80 90 100 110 120 KIAA01 LFSSLEPQIQPVYVPVPKQTIKKTKRNEEEESTSQIERPLSQEPAKKVKAKKKHTNAEKK ::::::::::::::::::.:::: :::::::::::::::: ::::::::::::::::::: gi|109 LFSSLEPQIQPVYVPVPKETIKKRKRNEEEESTSQIERPLLQEPAKKVKAKKKHTNAEKK 60 70 80 90 100 110 130 140 150 160 170 180 KIAA01 LADRESALASADLEEEIHQKQGQKRKNSQPGVKVADRKILDDTEDTVVSQRKKIQINQEE ::.:::::::::::::::::::::::::::::::::::::::..:::.:::::::::.:: gi|109 LANRESALASADLEEEIHQKQGQKRKNSQPGVKVADRKILDDVDDTVISQRKKIQINEEE 120 130 140 150 160 170 190 200 210 220 KIAA01 ERLKNERTVFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLVCFIPP :::::::::::::::::::::::::::::::::::::::::. gi|109 ERLKNERTVFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLIPAEGTLSKKLAAIKRKIH 180 190 200 210 220 230 gi|109 PDQKNINAYVVFKEESAATQALKRNGAQIADGFRIRVDLASETSSRDKRSVFVGNLPYKV 240 250 260 270 280 290 >>gi|123211150|emb|CAM28277.1| novel protein [Homo sapie (408 aa) initn: 1271 init1: 1271 opt: 1271 Z-score: 1300.7 bits: 248.8 E(): 9.5e-64 Smith-Waterman score: 1271; 100.000% identity (100.000% similar) in 197 aa overlap (5-201:1-197) 10 20 30 40 50 60 KIAA01 VRMALEGMSKRKRKRSVQEGENPDDGVRGSPPEDYRLGQVASSLFRGEHHSRGGTGRLAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 LEGMSKRKRKRSVQEGENPDDGVRGSPPEDYRLGQVASSLFRGEHHSRGGTGRLAS 10 20 30 40 50 70 80 90 100 110 120 KIAA01 LFSSLEPQIQPVYVPVPKQTIKKTKRNEEEESTSQIERPLSQEPAKKVKAKKKHTNAEKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 LFSSLEPQIQPVYVPVPKQTIKKTKRNEEEESTSQIERPLSQEPAKKVKAKKKHTNAEKK 60 70 80 90 100 110 130 140 150 160 170 180 KIAA01 LADRESALASADLEEEIHQKQGQKRKNSQPGVKVADRKILDDTEDTVVSQRKKIQINQEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 LADRESALASADLEEEIHQKQGQKRKNSQPGVKVADRKILDDTEDTVVSQRKKIQINQEE 120 130 140 150 160 170 190 200 210 220 KIAA01 ERLKNERTVFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLVCFIPP ::::::::::::::::::::: gi|123 ERLKNERTVFVGNLPVTCNKKIPAEGTLSKKLAAIKRKIHPDQKNINAYVVFKEESAATQ 180 190 200 210 220 230 >>gi|158455018|gb|AAI09867.1| RBM34 protein [Bos taurus] (272 aa) initn: 1155 init1: 1133 opt: 1133 Z-score: 1162.7 bits: 222.6 E(): 4.6e-56 Smith-Waterman score: 1133; 78.182% identity (95.000% similar) in 220 aa overlap (3-222:1-220) 10 20 30 40 50 60 KIAA01 VRMALEGMSKRKRKRSVQEGENPDDGVRGSPPEDYRLGQVASSLFRGEHHSRGGTGRLAS ::::: .::..:.:.:::.:::::. :. ::..::::.:::::.. :::.:::::: gi|158 MALEGKNKREKKQSAQEGQNPDDGACGNLEGDYEVGQVANSLFRGKQPSRGSTGRLAS 10 20 30 40 50 70 80 90 100 110 120 KIAA01 LFSSLEPQIQPVYVPVPKQTIKKTKRNEEEESTSQIERPLSQEPAKKVKAKKKHTNAEKK ::.:..::.::::::::...::: ::.:::::. ::.::: ::::::.:.::: ..:::: gi|158 LFGSVNPQLQPVYVPVPEEAIKKRKRDEEEESSPQIQRPLLQEPAKKMKVKKKLSDAEKK 60 70 80 90 100 110 130 140 150 160 170 180 KIAA01 LADRESALASADLEEEIHQKQGQKRKNSQPGVKVADRKILDDTEDTVVSQRKKIQINQEE ::.::.:::::::::::::::::::::::::: :::...:::.:.:::.::::::::::: gi|158 LANREDALASADLEEEIHQKQGQKRKNSQPGVTVADKELLDDVEETVVNQRKKIQINQEE 120 130 140 150 160 170 190 200 210 220 KIAA01 ERLKNERTVFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLVCFIPP :::::::::::::::::::::::::::::::::::::::::. gi|158 ERLKNERTVFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLIPAEGTLSKKLAAIKRKIH 180 190 200 210 220 230 gi|158 PDQKNINAYVVFKDESAATKAGKKWGPICRRISC 240 250 260 270 >>gi|194206109|ref|XP_001915106.1| PREDICTED: similar to (428 aa) initn: 1107 init1: 1083 opt: 1083 Z-score: 1109.3 bits: 213.4 E(): 4.3e-53 Smith-Waterman score: 1083; 75.909% identity (91.364% similar) in 220 aa overlap (3-222:1-220) 10 20 30 40 50 60 KIAA01 VRMALEGMSKRKRKRSVQEGENPDDGVRGSPPEDYRLGQVASSLFRGEHHSRGGTGRLAS ::.:: .:::.:::..:::::: : ::: :: .::::.:::.:.. :::..::::. gi|194 MAVEGKNKRKKKRSAEEGENPDGGGRGSLSGDYVVGQVANSLFHGKRPSRGSAGRLAA 10 20 30 40 50 70 80 90 100 110 120 KIAA01 LFSSLEPQIQPVYVPVPKQTIKKTKRNEEEESTSQIERPLSQEPAKKVKAKKKHTNAEKK ::.:.:::.:::::::::.: :: :..:: ::::::.: : ::: ::.:.::: ..:.:: gi|194 LFNSFEPQLQPVYVPVPKETTKKRKQDEEGESTSQIQRSLLQEPPKKMKVKKKLSDADKK 60 70 80 90 100 110 130 140 150 160 170 180 KIAA01 LADRESALASADLEEEIHQKQGQKRKNSQPGVKVADRKILDDTEDTVVSQRKKIQINQEE ::::: ::::::::::::::::::::::: .:::::.:.:::.. :::.::::.: :::. gi|194 LADREHALASADLEEEIHQKQGQKRKNSQSAVKVADKKVLDDVDHTVVNQRKKFQTNQED 120 130 140 150 160 170 190 200 210 220 KIAA01 ERLKNERTVFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLVCFIPP :::::::::::::::::::::::::::::::::::::::::. gi|194 ERLKNERTVFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLIPAEGTRSKKLAAIKRTIH 180 190 200 210 220 230 gi|194 PNQKNINAYVVFKDDSAAAKALKRNGAQIADGFRIRVDLASETSSRDKRSVFVGNLPYKV 240 250 260 270 280 290 227 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Tue Mar 3 22:14:18 2009 done: Tue Mar 3 22:20:25 2009 Total Scan time: 1302.710 Total Display time: 0.050 Function used was FASTA [version 34.26.5 April 26, 2007]