# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/ha00609.fasta.nr -Q ../query/KIAA0112.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA0112, 399 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7821329 sequences Expectation_n fit: rho(ln(x))= 5.5785+/-0.000192; mu= 10.0248+/- 0.011 mean_var=104.5952+/-20.216, 0's: 36 Z-trim: 52 B-trim: 143 in 1/66 Lambda= 0.125406 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|109086632|ref|XP_001100635.1| PREDICTED: simila ( 530) 2610 482.6 8.8e-134 gi|21431847|sp|Q15050.2|RRS1_HUMAN RecName: Full=R ( 365) 2466 456.4 4.7e-126 gi|194036669|ref|XP_001926363.1| PREDICTED: simila ( 551) 2373 439.7 7.3e-121 gi|149721357|ref|XP_001494863.1| PREDICTED: simila ( 365) 2344 434.3 2.1e-119 gi|57107921|ref|XP_544107.1| PREDICTED: similar to ( 365) 2326 431.0 2e-118 gi|122136026|sp|Q2KIH4.1|RRS1_BOVIN Ribosome bioge ( 365) 2325 430.9 2.3e-118 gi|182676579|sp|A1A5P2.1|RRS1_RAT RecName: Full=Ri ( 365) 2261 419.3 6.9e-115 gi|21362904|sp|Q9CYH6.1|RRS1_MOUSE RecName: Full=R ( 365) 2229 413.5 3.8e-113 gi|7670442|dbj|BAA95072.1| unnamed protein product ( 365) 2226 413.0 5.6e-113 gi|12860310|dbj|BAB31912.1| unnamed protein produc ( 365) 2222 412.2 9.2e-113 gi|12845436|dbj|BAB26750.1| unnamed protein produc ( 365) 2220 411.9 1.2e-112 gi|126321316|ref|XP_001379079.1| PREDICTED: simila ( 363) 1892 352.5 8.6e-95 gi|149572010|ref|XP_001509960.1| PREDICTED: simila ( 508) 1715 320.6 4.8e-85 gi|54261637|gb|AAH84301.1| Rrs1 protein [Xenopus l ( 344) 1501 281.8 1.6e-73 gi|47940235|gb|AAH72081.1| MGC78981 protein [Xenop ( 342) 1462 274.7 2.2e-71 gi|47207991|emb|CAF91693.1| unnamed protein produc ( 334) 1461 274.5 2.4e-71 gi|209736730|gb|ACI69234.1| Ribosome biogenesis re ( 353) 1441 270.9 3.1e-70 gi|45709905|gb|AAH67632.1| Rrs1 protein [Danio rer ( 345) 1426 268.2 2e-69 gi|33585885|gb|AAH55615.1| RRS1 ribosome biogenesi ( 346) 1426 268.2 2e-69 gi|158253555|gb|AAI54207.1| Rrs1 protein [Danio re ( 346) 1405 264.4 2.8e-68 gi|210130442|gb|EEA78113.1| hypothetical protein B ( 336) 1161 220.2 5.3e-55 gi|210101102|gb|EEA49171.1| hypothetical protein B ( 337) 1158 219.7 7.7e-55 gi|72010693|ref|XP_781111.1| PREDICTED: similar to ( 335) 1006 192.2 1.5e-46 gi|198435348|ref|XP_002125582.1| PREDICTED: simila ( 324) 985 188.4 2e-45 gi|221126069|ref|XP_002164297.1| PREDICTED: simila ( 335) 940 180.2 5.8e-43 gi|193919677|gb|EDW18544.1| GI13300 [Drosophila mo ( 347) 885 170.3 5.8e-40 gi|54650780|gb|AAV36969.1| LD45683p [Drosophila me ( 359) 882 169.8 8.7e-40 gi|21483408|gb|AAM52679.1| LD24586p [Drosophila me ( 361) 882 169.8 8.7e-40 gi|194128584|gb|EDW50627.1| GM14731 [Drosophila se ( 349) 878 169.0 1.4e-39 gi|194195788|gb|EDX09364.1| GD13910 [Drosophila si ( 349) 877 168.9 1.6e-39 gi|190653821|gb|EDV51064.1| GG15298 [Drosophila er ( 349) 877 168.9 1.6e-39 gi|194179951|gb|EDW93562.1| GE21520 [Drosophila ya ( 349) 877 168.9 1.6e-39 gi|220902479|gb|AAN12230.2| CG32409 [Drosophila me ( 349) 877 168.9 1.6e-39 gi|198151125|gb|EAL30202.2| GA16881 [Drosophila ps ( 344) 868 167.2 4.9e-39 gi|194158511|gb|EDW73412.1| GK16661 [Drosophila wi ( 349) 868 167.2 4.9e-39 gi|194154355|gb|EDW69539.1| GJ12069 [Drosophila vi ( 347) 866 166.9 6.3e-39 gi|167867283|gb|EDS30666.1| regulator of ribosome ( 352) 856 165.1 2.2e-38 gi|193898603|gb|EDV97469.1| GH14686 [Drosophila gr ( 344) 846 163.3 7.7e-38 gi|94469176|gb|ABF18437.1| regulator of ribosome s ( 347) 844 162.9 1e-37 gi|156219160|gb|EDO40046.1| predicted protein [Nem ( 244) 822 158.8 1.2e-36 gi|190587325|gb|EDV27367.1| hypothetical protein T ( 348) 803 155.5 1.7e-35 gi|157020644|gb|EAA04194.3| AGAP006808-PA [Anophel ( 346) 799 154.8 2.8e-35 gi|12859373|dbj|BAB31631.1| unnamed protein produc ( 125) 766 148.3 8.7e-34 gi|193610717|ref|XP_001942913.1| PREDICTED: simila ( 343) 762 148.1 2.9e-33 gi|110758413|ref|XP_394666.3| PREDICTED: similar t ( 339) 756 147.0 6.1e-33 gi|187035405|emb|CAP25286.1| Hypothetical protein ( 329) 744 144.8 2.7e-32 gi|21362907|sp|Q9XVT0.1|RRS1_CAEEL RecName: Full=R ( 333) 731 142.4 1.4e-31 gi|156553496|ref|XP_001600166.1| PREDICTED: simila ( 292) 684 133.9 4.6e-29 gi|220724315|gb|EED78367.1| predicted protein [Pos ( 315) 626 123.4 7e-26 gi|163771427|gb|EDQ85094.1| predicted protein [Mon (2077) 623 123.7 3.8e-25 >>gi|109086632|ref|XP_001100635.1| PREDICTED: similar to (530 aa) initn: 2610 init1: 2610 opt: 2610 Z-score: 2558.0 bits: 482.6 E(): 8.8e-134 Smith-Waterman score: 2610; 97.494% identity (99.499% similar) in 399 aa overlap (1-399:132-530) 10 20 30 KIAA01 IPASARGYAAGVWAATVGKVTSAAAPKRVS ::::::::.::::::.:::::::::::::: gi|109 TALCRPFLWLPGWRAGSGRSGSEPFFSGLGIPASARGYVAGVWAAAVGKVTSAAAPKRVS 110 120 130 140 150 160 40 50 60 70 80 90 KIAA01 RAGAMEGQSVEELLAKAEQDEAEKLQRITVHKELELQFDLGNLLASDRNPPTGLRCAGPT ::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|109 RAGAMEGQSVEELLAKAEQDEAEKLQRITVHKELELEFDLGNLLASDRNPPTGLRCAGPT 170 180 190 200 210 220 100 110 120 130 140 150 KIAA01 PEAELQALARDNTQLLINQLWQLPTERVEEAIVARLPEPTTRLPREKPLPRPRPLTRWQQ :::::.::::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|109 PEAELRALARDNTQLLINQLWQLPTERVEETIVARLPEPTTRLPREKPLPRPRPLTRWQQ 230 240 250 260 270 280 160 170 180 190 200 210 KIAA01 FARLKGIRPKKKTNLVWDEVSGQWRRRWGYQRARDDTKEWLIEVPGNADPLEDQFAKRIQ :::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::: gi|109 FARLKGIRPKKKTNLVWDEVSSQWRRRWGYQRARDDTKEWLIEVPGNADPLEDQFAKRIQ 290 300 310 320 330 340 220 230 240 250 260 270 KIAA01 AKKERVAKNELNRLRNLARAHKMQLPSAAGLHPTGHQSKEELGRAMQVAKVSTASVGRFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 AKKERVAKNELNRLRNLARAHKMQLPSAAGLHPTGHQSKEELGRAMQVAKVSTASVGRFQ 350 360 370 380 390 400 280 290 300 310 320 330 KIAA01 ERLPKEKVPRGSGKKRKFQPLFGDFAAEKKNQLELLRVMNSKKPQLDVTRATNKQMREED :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ERLPKEKAPRGSGKKRKFQPLFGDFAAEKKNQLELLRVMNSKKPQLDVTRATNKQMREED 410 420 430 440 450 460 340 350 360 370 380 390 KIAA01 QEEAAKRRKMSQKGKRKGGRQGPGGKRKGGPPSQGGKRKGGLGGKMNSGPPGLGGKRKGG ::::::::::::::::::::::::::::::::::::::::.::::::::: ::: ::::: gi|109 QEEAAKRRKMSQKGKRKGGRQGPGGKRKGGPPSQGGKRKGSLGGKMNSGPRGLGDKRKGG 470 480 490 500 510 520 KIAA01 QRPGGKRRK ::::::::: gi|109 QRPGGKRRK 530 >>gi|21431847|sp|Q15050.2|RRS1_HUMAN RecName: Full=Ribos (365 aa) initn: 2466 init1: 2466 opt: 2466 Z-score: 2419.2 bits: 456.4 E(): 4.7e-126 Smith-Waterman score: 2466; 100.000% identity (100.000% similar) in 365 aa overlap (35-399:1-365) 10 20 30 40 50 60 KIAA01 ARGYAAGVWAATVGKVTSAAAPKRVSRAGAMEGQSVEELLAKAEQDEAEKLQRITVHKEL :::::::::::::::::::::::::::::: gi|214 MEGQSVEELLAKAEQDEAEKLQRITVHKEL 10 20 30 70 80 90 100 110 120 KIAA01 ELQFDLGNLLASDRNPPTGLRCAGPTPEAELQALARDNTQLLINQLWQLPTERVEEAIVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|214 ELQFDLGNLLASDRNPPTGLRCAGPTPEAELQALARDNTQLLINQLWQLPTERVEEAIVA 40 50 60 70 80 90 130 140 150 160 170 180 KIAA01 RLPEPTTRLPREKPLPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVSGQWRRRWGYQRAR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|214 RLPEPTTRLPREKPLPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVSGQWRRRWGYQRAR 100 110 120 130 140 150 190 200 210 220 230 240 KIAA01 DDTKEWLIEVPGNADPLEDQFAKRIQAKKERVAKNELNRLRNLARAHKMQLPSAAGLHPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|214 DDTKEWLIEVPGNADPLEDQFAKRIQAKKERVAKNELNRLRNLARAHKMQLPSAAGLHPT 160 170 180 190 200 210 250 260 270 280 290 300 KIAA01 GHQSKEELGRAMQVAKVSTASVGRFQERLPKEKVPRGSGKKRKFQPLFGDFAAEKKNQLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|214 GHQSKEELGRAMQVAKVSTASVGRFQERLPKEKVPRGSGKKRKFQPLFGDFAAEKKNQLE 220 230 240 250 260 270 310 320 330 340 350 360 KIAA01 LLRVMNSKKPQLDVTRATNKQMREEDQEEAAKRRKMSQKGKRKGGRQGPGGKRKGGPPSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|214 LLRVMNSKKPQLDVTRATNKQMREEDQEEAAKRRKMSQKGKRKGGRQGPGGKRKGGPPSQ 280 290 300 310 320 330 370 380 390 KIAA01 GGKRKGGLGGKMNSGPPGLGGKRKGGQRPGGKRRK ::::::::::::::::::::::::::::::::::: gi|214 GGKRKGGLGGKMNSGPPGLGGKRKGGQRPGGKRRK 340 350 360 >>gi|194036669|ref|XP_001926363.1| PREDICTED: similar to (551 aa) initn: 2373 init1: 2373 opt: 2373 Z-score: 2326.1 bits: 439.7 E(): 7.3e-121 Smith-Waterman score: 2373; 95.109% identity (99.185% similar) in 368 aa overlap (32-399:184-551) 10 20 30 40 50 60 KIAA01 PASARGYAAGVWAATVGKVTSAAAPKRVSRAGAMEGQSVEELLAKAEQDEAEKLQRITVH :::::::::::::::::.:::::::::::: gi|194 DERLGDCTWLCCLGLCRRYWRIDWNCYPGTAGAMEGQSVEELLAKAERDEAEKLQRITVH 160 170 180 190 200 210 70 80 90 100 110 120 KIAA01 KELELQFDLGNLLASDRNPPTGLRCAGPTPEAELQALARDNTQLLINQLWQLPTERVEEA :::::.:::::::::::::::::: :::: ::::.::::::::::::::::::::::::. gi|194 KELELEFDLGNLLASDRNPPTGLRHAGPTKEAELRALARDNTQLLINQLWQLPTERVEET 220 230 240 250 260 270 130 140 150 160 170 180 KIAA01 IVARLPEPTTRLPREKPLPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVSGQWRRRWGYQ .::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::: gi|194 LVARLPEPTTRLPREKPVPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVSGQWRRRWGYQ 280 290 300 310 320 330 190 200 210 220 230 240 KIAA01 RARDDTKEWLIEVPGNADPLEDQFAKRIQAKKERVAKNELNRLRNLARAHKMQLPSAAGL ::::::::::::::.::::.:::::::::::::::::::::::::::::::::::::::. gi|194 RARDDTKEWLIEVPSNADPMEDQFAKRIQAKKERVAKNELNRLRNLARAHKMQLPSAAGM 340 350 360 370 380 390 250 260 270 280 290 300 KIAA01 HPTGHQSKEELGRAMQVAKVSTASVGRFQERLPKEKVPRGSGKKRKFQPLFGDFAAEKKN ::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::. gi|194 HPTGHQSKEELGRAMQVAKVSTASVGRFQERLPKEKAPRGSGKKRKFQPLFGDFAAEKKS 400 410 420 430 440 450 310 320 330 340 350 360 KIAA01 QLELLRVMNSKKPQLDVTRATNKQMREEDQEEAAKRRKMSQKGKRKGGRQGPGGKRKGGP :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 QLEMLRVMNSKKPQLDVTRATNKQMREEDQEEAAKRRKMSQKGKRKGGRQGPGGKRKGGP 460 470 480 490 500 510 370 380 390 KIAA01 PSQGGKRKGGLGGKMNSGPPGLGGKRKGGQRPGGKRRK ::::::::::.:.:::::::::::::::::. :::::: gi|194 PSQGGKRKGGVGSKMNSGPPGLGGKRKGGQHQGGKRRK 520 530 540 550 >>gi|149721357|ref|XP_001494863.1| PREDICTED: similar to (365 aa) initn: 2344 init1: 2344 opt: 2344 Z-score: 2299.9 bits: 434.3 E(): 2.1e-119 Smith-Waterman score: 2344; 94.521% identity (98.904% similar) in 365 aa overlap (35-399:1-365) 10 20 30 40 50 60 KIAA01 ARGYAAGVWAATVGKVTSAAAPKRVSRAGAMEGQSVEELLAKAEQDEAEKLQRITVHKEL :::.::::::::::.::::::::::::::: gi|149 MEGHSVEELLAKAERDEAEKLQRITVHKEL 10 20 30 70 80 90 100 110 120 KIAA01 ELQFDLGNLLASDRNPPTGLRCAGPTPEAELQALARDNTQLLINQLWQLPTERVEEAIVA ::.::::::::.::::::..: :::::::.:.:::::::::::::::::::::::::.:: gi|149 ELEFDLGNLLATDRNPPTAVRSAGPTPEADLRALARDNTQLLINQLWQLPTERVEEALVA 40 50 60 70 80 90 130 140 150 160 170 180 KIAA01 RLPEPTTRLPREKPLPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVSGQWRRRWGYQRAR ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: gi|149 RLPEPTTRLPREKPVPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVSGQWRRRWGYQRAR 100 110 120 130 140 150 190 200 210 220 230 240 KIAA01 DDTKEWLIEVPGNADPLEDQFAKRIQAKKERVAKNELNRLRNLARAHKMQLPSAAGLHPT ::::::::::::.:::.::::::::::::::::::::::::::::::: :::::::.::: gi|149 DDTKEWLIEVPGGADPMEDQFAKRIQAKKERVAKNELNRLRNLARAHKTQLPSAAGMHPT 160 170 180 190 200 210 250 260 270 280 290 300 KIAA01 GHQSKEELGRAMQVAKVSTASVGRFQERLPKEKVPRGSGKKRKFQPLFGDFAAEKKNQLE :::::::::::::::::::::::::::::::::.::::::::::::::::::::::.::: gi|149 GHQSKEELGRAMQVAKVSTASVGRFQERLPKEKAPRGSGKKRKFQPLFGDFAAEKKSQLE 220 230 240 250 260 270 310 320 330 340 350 360 KIAA01 LLRVMNSKKPQLDVTRATNKQMREEDQEEAAKRRKMSQKGKRKGGRQGPGGKRKGGPPSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LLRVMNSKKPQLDVTRATNKQMREEDQEEAAKRRKMSQKGKRKGGRQGPGGKRKGGPPSQ 280 290 300 310 320 330 370 380 390 KIAA01 GGKRKGGLGGKMNSGPPGLGGKRKGGQRPGGKRRK ::::::::::::::::::::::::: :. :::::: gi|149 GGKRKGGLGGKMNSGPPGLGGKRKGRQHQGGKRRK 340 350 360 >>gi|57107921|ref|XP_544107.1| PREDICTED: similar to hom (365 aa) initn: 2326 init1: 2326 opt: 2326 Z-score: 2282.3 bits: 431.0 E(): 2e-118 Smith-Waterman score: 2326; 94.247% identity (98.630% similar) in 365 aa overlap (35-399:1-365) 10 20 30 40 50 60 KIAA01 ARGYAAGVWAATVGKVTSAAAPKRVSRAGAMEGQSVEELLAKAEQDEAEKLQRITVHKEL ::: ::::::::::.::::::::::::::: gi|571 MEGPSVEELLAKAERDEAEKLQRITVHKEL 10 20 30 70 80 90 100 110 120 KIAA01 ELQFDLGNLLASDRNPPTGLRCAGPTPEAELQALARDNTQLLINQLWQLPTERVEEAIVA ::.:::::::::: :::.::: :::.:::::::::::::::::::::::::::::::.:: gi|571 ELEFDLGNLLASDPNPPAGLRRAGPSPEAELQALARDNTQLLINQLWQLPTERVEEALVA 40 50 60 70 80 90 130 140 150 160 170 180 KIAA01 RLPEPTTRLPREKPLPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVSGQWRRRWGYQRAR ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: gi|571 RLPEPTTRLPREKPVPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVSGQWRRRWGYQRAR 100 110 120 130 140 150 190 200 210 220 230 240 KIAA01 DDTKEWLIEVPGNADPLEDQFAKRIQAKKERVAKNELNRLRNLARAHKMQLPSAAGLHPT ::::::::::::.:::::::::::::::::::::::::::::::::::::::::::.::: gi|571 DDTKEWLIEVPGGADPLEDQFAKRIQAKKERVAKNELNRLRNLARAHKMQLPSAAGMHPT 160 170 180 190 200 210 250 260 270 280 290 300 KIAA01 GHQSKEELGRAMQVAKVSTASVGRFQERLPKEKVPRGSGKKRKFQPLFGDFAAEKKNQLE :::::::::::::::::::::::::::::::::.::.:::::::::::::::::::.::: gi|571 GHQSKEELGRAMQVAKVSTASVGRFQERLPKEKAPRSSGKKRKFQPLFGDFAAEKKSQLE 220 230 240 250 260 270 310 320 330 340 350 360 KIAA01 LLRVMNSKKPQLDVTRATNKQMREEDQEEAAKRRKMSQKGKRKGGRQGPGGKRKGGPPSQ .::::::::::::::::::::::::::::::::::::::::::::::::::.:::.:::: gi|571 MLRVMNSKKPQLDVTRATNKQMREEDQEEAAKRRKMSQKGKRKGGRQGPGGQRKGAPPSQ 280 290 300 310 320 330 370 380 390 KIAA01 GGKRKGGLGGKMNSGPPGLGGKRKGGQRPGGKRRK .:::::::::::::::: :::::::::. :::::: gi|571 AGKRKGGLGGKMNSGPPRLGGKRKGGQHQGGKRRK 340 350 360 >>gi|122136026|sp|Q2KIH4.1|RRS1_BOVIN Ribosome biogenesi (365 aa) initn: 2325 init1: 2325 opt: 2325 Z-score: 2281.4 bits: 430.9 E(): 2.3e-118 Smith-Waterman score: 2325; 93.699% identity (98.630% similar) in 365 aa overlap (35-399:1-365) 10 20 30 40 50 60 KIAA01 ARGYAAGVWAATVGKVTSAAAPKRVSRAGAMEGQSVEELLAKAEQDEAEKLQRITVHKEL ::::::::::::::.::::::::::: ::: gi|122 MEGQSVEELLAKAERDEAEKLQRITVLKEL 10 20 30 70 80 90 100 110 120 KIAA01 ELQFDLGNLLASDRNPPTGLRCAGPTPEAELQALARDNTQLLINQLWQLPTERVEEAIVA ::.:::::::::::::::::: :::: ::::.:::::::::::::::::::::::::.:: gi|122 ELEFDLGNLLASDRNPPTGLRHAGPTQEAELRALARDNTQLLINQLWQLPTERVEEALVA 40 50 60 70 80 90 130 140 150 160 170 180 KIAA01 RLPEPTTRLPREKPLPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVSGQWRRRWGYQRAR :::::.::::::::.:::::::::::::::::::::::::::::::::.::::::::::: gi|122 RLPEPSTRLPREKPVPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVSGRWRRRWGYQRAR 100 110 120 130 140 150 190 200 210 220 230 240 KIAA01 DDTKEWLIEVPGNADPLEDQFAKRIQAKKERVAKNELNRLRNLARAHKMQLPSAAGLHPT ::::::::::::::::.:::::::::::::::::::::::::::::::::::::::.::: gi|122 DDTKEWLIEVPGNADPMEDQFAKRIQAKKERVAKNELNRLRNLARAHKMQLPSAAGMHPT 160 170 180 190 200 210 250 260 270 280 290 300 KIAA01 GHQSKEELGRAMQVAKVSTASVGRFQERLPKEKVPRGSGKKRKFQPLFGDFAAEKKNQLE :::::::::::::::::::::::::::::::::.::::::::::::::::::::.:.::: gi|122 GHQSKEELGRAMQVAKVSTASVGRFQERLPKEKAPRGSGKKRKFQPLFGDFAAERKSQLE 220 230 240 250 260 270 310 320 330 340 350 360 KIAA01 LLRVMNSKKPQLDVTRATNKQMREEDQEEAAKRRKMSQKGKRKGGRQGPGGKRKGGPPSQ .::::::::::.:.::::::::::::::::::::::::::::::::::::.::::: ::: gi|122 MLRVMNSKKPQMDITRATNKQMREEDQEEAAKRRKMSQKGKRKGGRQGPGSKRKGGTPSQ 280 290 300 310 320 330 370 380 390 KIAA01 GGKRKGGLGGKMNSGPPGLGGKRKGGQRPGGKRRK :::::::::::::::::::.:::::::. :::::: gi|122 GGKRKGGLGGKMNSGPPGLSGKRKGGQHQGGKRRK 340 350 360 >>gi|182676579|sp|A1A5P2.1|RRS1_RAT RecName: Full=Riboso (365 aa) initn: 2261 init1: 2261 opt: 2261 Z-score: 2218.8 bits: 419.3 E(): 6.9e-115 Smith-Waterman score: 2261; 91.507% identity (97.534% similar) in 365 aa overlap (35-399:1-365) 10 20 30 40 50 60 KIAA01 ARGYAAGVWAATVGKVTSAAAPKRVSRAGAMEGQSVEELLAKAEQDEAEKLQRITVHKEL :::::::::::::.:.:::::::::::::: gi|182 MEGQSVEELLAKAKQEEAEKLQRITVHKEL 10 20 30 70 80 90 100 110 120 KIAA01 ELQFDLGNLLASDRNPPTGLRCAGPTPEAELQALARDNTQLLINQLWQLPTERVEEAIVA ::.::::::::::::::: :: :::.:::::.::::::::::.::::::::::::::.:: gi|182 ELEFDLGNLLASDRNPPTVLRQAGPSPEAELRALARDNTQLLVNQLWQLPTERVEEAVVA 40 50 60 70 80 90 130 140 150 160 170 180 KIAA01 RLPEPTTRLPREKPLPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVSGQWRRRWGYQRAR :::::.::::::::::::::::::::::::::::::::::::::::::::::::::.::: gi|182 RLPEPATRLPREKPLPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVSGQWRRRWGYKRAR 100 110 120 130 140 150 190 200 210 220 230 240 KIAA01 DDTKEWLIEVPGNADPLEDQFAKRIQAKKERVAKNELNRLRNLARAHKMQLPSAAGLHPT ::::::::::::.:::.::::::::.::::::::::::::::::::::::.::.:::::: gi|182 DDTKEWLIEVPGSADPMEDQFAKRIRAKKERVAKNELNRLRNLARAHKMQMPSSAGLHPT 160 170 180 190 200 210 250 260 270 280 290 300 KIAA01 GHQSKEELGRAMQVAKVSTASVGRFQERLPKEKVPRGSGKKRKFQPLFGDFAAEKKNQLE :::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|182 GHQSKEELGRAMQVAKVSTASVGRFQERLPKEKAPRGSGKKRKFQPLFGDFAAEKKNQLE 220 230 240 250 260 270 310 320 330 340 350 360 KIAA01 LLRVMNSKKPQLDVTRATNKQMREEDQEEAAKRRKMSQKGKRKGGRQGPGGKRKGGPPSQ :::::::::::::::::::::::::::::::::::::::::.:::::::.:.:::::::: gi|182 LLRVMNSKKPQLDVTRATNKQMREEDQEEAAKRRKMSQKGKKKGGRQGPSGRRKGGPPSQ 280 290 300 310 320 330 370 380 390 KIAA01 GGKRKGGLGGKMNSGPPGLGGKRKGGQRPGGKRRK : :::: :::: .: ::.::::.:: . :::::: gi|182 GEKRKGVLGGKKHSRPPALGGKKKGVPHHGGKRRK 340 350 360 >>gi|21362904|sp|Q9CYH6.1|RRS1_MOUSE RecName: Full=Ribos (365 aa) initn: 2229 init1: 2229 opt: 2229 Z-score: 2187.5 bits: 413.5 E(): 3.8e-113 Smith-Waterman score: 2229; 90.685% identity (96.712% similar) in 365 aa overlap (35-399:1-365) 10 20 30 40 50 60 KIAA01 ARGYAAGVWAATVGKVTSAAAPKRVSRAGAMEGQSVEELLAKAEQDEAEKLQRITVHKEL :::: ::::::::::.:::::::::::::: gi|213 MEGQRVEELLAKAEQEEAEKLQRITVHKEL 10 20 30 70 80 90 100 110 120 KIAA01 ELQFDLGNLLASDRNPPTGLRCAGPTPEAELQALARDNTQLLINQLWQLPTERVEEAIVA ::.::::::::::::::: :: :::.:::::.:::::::::::::::.:::::::::.:: gi|213 ELEFDLGNLLASDRNPPTVLRQAGPSPEAELRALARDNTQLLINQLWRLPTERVEEAVVA 40 50 60 70 80 90 130 140 150 160 170 180 KIAA01 RLPEPTTRLPREKPLPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVSGQWRRRWGYQRAR :::::.:::::::::::::::::::::::::::::::::::::::.::::::::::.::: gi|213 RLPEPATRLPREKPLPRPRPLTRWQQFARLKGIRPKKKTNLVWDEASGQWRRRWGYKRAR 100 110 120 130 140 150 190 200 210 220 230 240 KIAA01 DDTKEWLIEVPGNADPLEDQFAKRIQAKKERVAKNELNRLRNLARAHKMQLPSAAGLHPT ::::::::::::.:::.::::::: :::::::::::::::::::::::::.::.:::::: gi|213 DDTKEWLIEVPGSADPMEDQFAKRTQAKKERVAKNELNRLRNLARAHKMQMPSSAGLHPT 160 170 180 190 200 210 250 260 270 280 290 300 KIAA01 GHQSKEELGRAMQVAKVSTASVGRFQERLPKEKVPRGSGKKRKFQPLFGDFAAEKKNQLE :::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|213 GHQSKEELGRAMQVAKVSTASVGRFQERLPKEKAPRGSGKKRKFQPLFGDFAAEKKNQLE 220 230 240 250 260 270 310 320 330 340 350 360 KIAA01 LLRVMNSKKPQLDVTRATNKQMREEDQEEAAKRRKMSQKGKRKGGRQGPGGKRKGGPPSQ ::::::::::.::::::::::::::::::::::::::::::::::::::.::::::::.: gi|213 LLRVMNSKKPRLDVTRATNKQMREEDQEEAAKRRKMSQKGKRKGGRQGPSGKRKGGPPGQ 280 290 300 310 320 330 370 380 390 KIAA01 GGKRKGGLGGKMNSGPPGLGGKRKGGQRPGGKRRK : :::::::.: .: : .:.::.:: :::::: gi|213 GEKRKGGLGSKKHSWPSALAGKKKGVPPQGGKRRK 340 350 360 >>gi|7670442|dbj|BAA95072.1| unnamed protein product [Mu (365 aa) initn: 2226 init1: 2226 opt: 2226 Z-score: 2184.6 bits: 413.0 E(): 5.6e-113 Smith-Waterman score: 2226; 90.411% identity (96.712% similar) in 365 aa overlap (35-399:1-365) 10 20 30 40 50 60 KIAA01 ARGYAAGVWAATVGKVTSAAAPKRVSRAGAMEGQSVEELLAKAEQDEAEKLQRITVHKEL :::: ::::::::::.:::::::::::::: gi|767 MEGQRVEELLAKAEQEEAEKLQRITVHKEL 10 20 30 70 80 90 100 110 120 KIAA01 ELQFDLGNLLASDRNPPTGLRCAGPTPEAELQALARDNTQLLINQLWQLPTERVEEAIVA ::.::::::::::::::: :: :::.:::::.:::::::::::::::.:::::::::.:: gi|767 ELEFDLGNLLASDRNPPTVLRQAGPSPEAELRALARDNTQLLINQLWRLPTERVEEAVVA 40 50 60 70 80 90 130 140 150 160 170 180 KIAA01 RLPEPTTRLPREKPLPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVSGQWRRRWGYQRAR :::::.:::::::::::::::::::::::::::::::::::::::.::::::::::.::: gi|767 RLPEPATRLPREKPLPRPRPLTRWQQFARLKGIRPKKKTNLVWDEASGQWRRRWGYKRAR 100 110 120 130 140 150 190 200 210 220 230 240 KIAA01 DDTKEWLIEVPGNADPLEDQFAKRIQAKKERVAKNELNRLRNLARAHKMQLPSAAGLHPT ::::::::::::.:::.::::::: :::::::::::::::::::::::::.::.:::::: gi|767 DDTKEWLIEVPGSADPMEDQFAKRTQAKKERVAKNELNRLRNLARAHKMQMPSSAGLHPT 160 170 180 190 200 210 250 260 270 280 290 300 KIAA01 GHQSKEELGRAMQVAKVSTASVGRFQERLPKEKVPRGSGKKRKFQPLFGDFAAEKKNQLE :::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|767 GHQSKEELGRAMQVAKVSTASVGRFQERLPKEKAPRGSGKKRKFQPLFGDFAAEKKNQLE 220 230 240 250 260 270 310 320 330 340 350 360 KIAA01 LLRVMNSKKPQLDVTRATNKQMREEDQEEAAKRRKMSQKGKRKGGRQGPGGKRKGGPPSQ ::::::::::.::::::::::::::::::::::::::::::::::::::.:::.::::.: gi|767 LLRVMNSKKPRLDVTRATNKQMREEDQEEAAKRRKMSQKGKRKGGRQGPSGKRRGGPPGQ 280 290 300 310 320 330 370 380 390 KIAA01 GGKRKGGLGGKMNSGPPGLGGKRKGGQRPGGKRRK : :::::::.: .: : .:.::.:: :::::: gi|767 GEKRKGGLGSKKHSWPSALAGKKKGVPPQGGKRRK 340 350 360 >>gi|12860310|dbj|BAB31912.1| unnamed protein product [M (365 aa) initn: 2222 init1: 2222 opt: 2222 Z-score: 2180.7 bits: 412.2 E(): 9.2e-113 Smith-Waterman score: 2222; 90.411% identity (96.712% similar) in 365 aa overlap (35-399:1-365) 10 20 30 40 50 60 KIAA01 ARGYAAGVWAATVGKVTSAAAPKRVSRAGAMEGQSVEELLAKAEQDEAEKLQRITVHKEL :::: ::::::::::.:::::::::::::: gi|128 MEGQRVEELLAKAEQEEAEKLQRITVHKEL 10 20 30 70 80 90 100 110 120 KIAA01 ELQFDLGNLLASDRNPPTGLRCAGPTPEAELQALARDNTQLLINQLWQLPTERVEEAIVA ::.::::::::::::::: :: :::.:::::.:::::::::::::::.:::::::::.:: gi|128 ELEFDLGNLLASDRNPPTVLRQAGPSPEAELRALARDNTQLLINQLWRLPTERVEEAVVA 40 50 60 70 80 90 130 140 150 160 170 180 KIAA01 RLPEPTTRLPREKPLPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVSGQWRRRWGYQRAR :::::.:::::::::::::::::::::::::::::::::::::::.::::::::::.::: gi|128 RLPEPATRLPREKPLPRPRPLTRWQQFARLKGIRPKKKTNLVWDEASGQWRRRWGYKRAR 100 110 120 130 140 150 190 200 210 220 230 240 KIAA01 DDTKEWLIEVPGNADPLEDQFAKRIQAKKERVAKNELNRLRNLARAHKMQLPSAAGLHPT ::::::::::::.:::.::::::: :::::::::.:::::::::::::::.::.:::::: gi|128 DDTKEWLIEVPGSADPMEDQFAKRTQAKKERVAKGELNRLRNLARAHKMQMPSSAGLHPT 160 170 180 190 200 210 250 260 270 280 290 300 KIAA01 GHQSKEELGRAMQVAKVSTASVGRFQERLPKEKVPRGSGKKRKFQPLFGDFAAEKKNQLE :::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::: gi|128 GHQSKEELGRAMQVAKVSTASVGRFQERLPKEKAPRGSGKKRKFQPLFGDFAAEKKNQLE 220 230 240 250 260 270 310 320 330 340 350 360 KIAA01 LLRVMNSKKPQLDVTRATNKQMREEDQEEAAKRRKMSQKGKRKGGRQGPGGKRKGGPPSQ ::::::::::.::::::::::::::::::::::::::::::::::::::.::::::::.: gi|128 LLRVMNSKKPRLDVTRATNKQMREEDQEEAAKRRKMSQKGKRKGGRQGPSGKRKGGPPGQ 280 290 300 310 320 330 370 380 390 KIAA01 GGKRKGGLGGKMNSGPPGLGGKRKGGQRPGGKRRK : :::::::.: .: : .:.::.:: :::::: gi|128 GEKRKGGLGSKKHSWPSALAGKKKGVPPQGGKRRK 340 350 360 399 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Tue Mar 3 21:47:37 2009 done: Tue Mar 3 21:52:25 2009 Total Scan time: 1503.390 Total Display time: 0.120 Function used was FASTA [version 34.26.5 April 26, 2007]