# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/ha00659.fasta.nr -Q ../query/KIAA0111.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA0111, 412 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7810663 sequences Expectation_n fit: rho(ln(x))= 5.1359+/-0.000181; mu= 10.4356+/- 0.010 mean_var=71.5552+/-13.800, 0's: 40 Z-trim: 161 B-trim: 21 in 1/64 Lambda= 0.151619 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|20532400|sp|P38919.4|IF4A3_HUMAN RecName: Full= ( 411) 2659 590.8 1.9e-166 gi|60652753|gb|AAX29071.1| DEAD box polypeptide 48 ( 412) 2659 590.8 1.9e-166 gi|114794629|pdb|2HYI|C Chain C, Structure Of The ( 413) 2659 590.8 1.9e-166 gi|109825494|sp|Q2NL22.3|IF4A3_BOVIN RecName: Full ( 411) 2654 589.7 4e-166 gi|114670845|ref|XP_511724.2| PREDICTED: similar t ( 543) 2654 589.8 5e-166 gi|114794876|pdb|2J0Q|A Chain A, The Crystal Struc ( 410) 2652 589.3 5.5e-166 gi|73964736|ref|XP_533130.2| PREDICTED: similar to ( 411) 2649 588.6 8.6e-166 gi|73620773|sp|Q4R3Q1.3|IF4A3_MACFA RecName: Full= ( 411) 2649 588.6 8.6e-166 gi|42560197|sp|Q91VC3.3|IF4A3_MOUSE RecName: Full= ( 411) 2648 588.4 1e-165 gi|496902|emb|CAA56074.1| translation initiation f ( 411) 2642 587.1 2.5e-165 gi|74142079|dbj|BAE41100.1| unnamed protein produc ( 411) 2639 586.4 3.9e-165 gi|26344810|dbj|BAC36054.1| unnamed protein produc ( 411) 2639 586.4 3.9e-165 gi|197128100|gb|ACH44598.1| putative DEAD box poly ( 410) 2609 579.9 3.7e-163 gi|53127756|emb|CAG31207.1| hypothetical protein [ ( 412) 2608 579.6 4.3e-163 gi|51712358|ref|XP_485792.1| PREDICTED: hypothetic ( 411) 2601 578.1 1.2e-162 gi|83021886|ref|XP_923606.1| PREDICTED: similar to ( 411) 2596 577.0 2.7e-162 gi|218505708|ref|NP_001136206.1| predicted gene, E ( 411) 2591 575.9 5.7e-162 gi|163916017|gb|AAI57178.1| LOC100135173 protein [ ( 415) 2579 573.3 3.5e-161 gi|187957004|gb|AAI58084.1| EG434080 protein [Mus ( 411) 2577 572.9 4.8e-161 gi|213624377|gb|AAI71014.1| Hypothetical protein L ( 415) 2577 572.9 4.8e-161 gi|54311504|gb|AAH84859.1| Unknown (protein for MG ( 415) 2559 568.9 7.3e-160 gi|28277876|gb|AAH45939.1| Eukaryotic translation ( 406) 2539 564.5 1.5e-158 gi|47209111|emb|CAF90069.1| unnamed protein produc ( 415) 2539 564.5 1.5e-158 gi|197631985|gb|ACH70716.1| eukaryotic translation ( 406) 2538 564.3 1.7e-158 gi|114794619|pdb|2HXY|A Chain A, Crystal Structure ( 391) 2531 562.8 4.9e-158 gi|2443810|gb|AAB71410.1| eukaryotic translation i ( 414) 2530 562.6 5.9e-158 gi|126306068|ref|XP_001381369.1| PREDICTED: simila ( 404) 2462 547.7 1.8e-153 gi|116668332|pdb|2J0U|A Chain A, The Crystal Struc ( 374) 2439 542.6 5.4e-152 gi|116668333|pdb|2J0U|B Chain B, The Crystal Struc ( 374) 2424 539.4 5.2e-151 gi|210111452|gb|EEA59251.1| hypothetical protein B ( 403) 2404 535.0 1.2e-149 gi|198423899|ref|XP_002126471.1| PREDICTED: simila ( 409) 2379 529.5 5.2e-148 gi|215507887|gb|EEC17341.1| DEAD box ATP-dependent ( 402) 2378 529.3 5.9e-148 gi|210087031|gb|EEA35424.1| hypothetical protein B ( 398) 2376 528.9 8e-148 gi|156227658|gb|EDO48460.1| predicted protein [Nem ( 407) 2356 524.5 1.7e-146 gi|48136057|ref|XP_393356.1| PREDICTED: similar to ( 403) 2350 523.2 4.1e-146 gi|116129059|gb|EAA08469.4| AGAP003089-PA [Anophel ( 400) 2340 521.0 1.9e-145 gi|110376569|gb|ABG73410.1| eIF4AIII protein [Bomb ( 405) 2336 520.1 3.5e-145 gi|212518164|gb|EEB19956.1| DEAD box ATP-dependent ( 407) 2335 519.9 4.1e-145 gi|108869079|gb|EAT33304.1| DEAD box ATP-dependent ( 400) 2329 518.6 1e-144 gi|190627620|gb|EDV43144.1| GF18341 [Drosophila an ( 399) 2323 517.3 2.5e-144 gi|194169476|gb|EDW84377.1| GK13178 [Drosophila wi ( 395) 2320 516.6 3.9e-144 gi|7299019|gb|AAF54221.1| eIF4AIII [Drosophila mel ( 399) 2316 515.8 7.1e-144 gi|194121003|gb|EDW43046.1| GM23722 [Drosophila se ( 399) 2315 515.5 8.3e-144 gi|31746585|gb|AAK29954.2| Hypothetical protein Y6 ( 399) 2314 515.3 9.7e-144 gi|54638586|gb|EAL27988.1| GA20384 [Drosophila pse ( 399) 2314 515.3 9.7e-144 gi|2773184|gb|AAB96704.1| Hypothetical protein F33 ( 399) 2312 514.9 1.3e-143 gi|187035232|emb|CAP25672.1| Hypothetical protein ( 400) 2311 514.7 1.5e-143 gi|19528517|gb|AAL90373.1| RE50350p [Drosophila me ( 399) 2310 514.4 1.8e-143 gi|190580170|gb|EDV20255.1| DEAD box ATP-dependent ( 401) 2305 513.3 3.8e-143 gi|91087239|ref|XP_975511.1| PREDICTED: similar to ( 404) 2298 511.8 1.1e-142 >>gi|20532400|sp|P38919.4|IF4A3_HUMAN RecName: Full=Euka (411 aa) initn: 2659 init1: 2659 opt: 2659 Z-score: 3144.5 bits: 590.8 E(): 1.9e-166 Smith-Waterman score: 2659; 100.000% identity (100.000% similar) in 411 aa overlap (2-412:1-411) 10 20 30 40 50 60 KIAA01 IMATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFE ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|205 MATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFE 10 20 30 40 50 70 80 90 100 110 120 KIAA01 KPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|205 KPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELA 60 70 80 90 100 110 130 140 150 160 170 180 KIAA01 VQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|205 VQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTR 120 130 140 150 160 170 190 200 210 220 230 240 KIAA01 AIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|205 AIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRI 180 190 200 210 220 230 250 260 270 280 290 300 KIAA01 LVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|205 LVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRE 240 250 260 270 280 290 310 320 330 340 350 360 KIAA01 ANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|205 ANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRE 300 310 320 330 340 350 370 380 390 400 410 KIAA01 LYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|205 LYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 360 370 380 390 400 410 >>gi|60652753|gb|AAX29071.1| DEAD box polypeptide 48 [sy (412 aa) initn: 2659 init1: 2659 opt: 2659 Z-score: 3144.5 bits: 590.8 E(): 1.9e-166 Smith-Waterman score: 2659; 100.000% identity (100.000% similar) in 411 aa overlap (2-412:1-411) 10 20 30 40 50 60 KIAA01 IMATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFE ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|606 MATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFE 10 20 30 40 50 70 80 90 100 110 120 KIAA01 KPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|606 KPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELA 60 70 80 90 100 110 130 140 150 160 170 180 KIAA01 VQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|606 VQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTR 120 130 140 150 160 170 190 200 210 220 230 240 KIAA01 AIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|606 AIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRI 180 190 200 210 220 230 250 260 270 280 290 300 KIAA01 LVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|606 LVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRE 240 250 260 270 280 290 310 320 330 340 350 360 KIAA01 ANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|606 ANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRE 300 310 320 330 340 350 370 380 390 400 410 KIAA01 LYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|606 LYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLIL 360 370 380 390 400 410 >>gi|114794629|pdb|2HYI|C Chain C, Structure Of The Huma (413 aa) initn: 2659 init1: 2659 opt: 2659 Z-score: 3144.5 bits: 590.8 E(): 1.9e-166 Smith-Waterman score: 2659; 100.000% identity (100.000% similar) in 411 aa overlap (2-412:1-411) 10 20 30 40 50 60 KIAA01 IMATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFE ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 MATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFE 10 20 30 40 50 70 80 90 100 110 120 KIAA01 KPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 KPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELA 60 70 80 90 100 110 130 140 150 160 170 180 KIAA01 VQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 VQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTR 120 130 140 150 160 170 190 200 210 220 230 240 KIAA01 AIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 AIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRI 180 190 200 210 220 230 250 260 270 280 290 300 KIAA01 LVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRE 240 250 260 270 280 290 310 320 330 340 350 360 KIAA01 ANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 ANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRE 300 310 320 330 340 350 370 380 390 400 410 KIAA01 LYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLILE 360 370 380 390 400 410 >>gi|109825494|sp|Q2NL22.3|IF4A3_BOVIN RecName: Full=Euk (411 aa) initn: 2654 init1: 2654 opt: 2654 Z-score: 3138.6 bits: 589.7 E(): 4e-166 Smith-Waterman score: 2654; 99.757% identity (100.000% similar) in 411 aa overlap (2-412:1-411) 10 20 30 40 50 60 KIAA01 IMATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFE ::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 MAATATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFE 10 20 30 40 50 70 80 90 100 110 120 KIAA01 KPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 KPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELA 60 70 80 90 100 110 130 140 150 160 170 180 KIAA01 VQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTR 120 130 140 150 160 170 190 200 210 220 230 240 KIAA01 AIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 AIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRI 180 190 200 210 220 230 250 260 270 280 290 300 KIAA01 LVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRE 240 250 260 270 280 290 310 320 330 340 350 360 KIAA01 ANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 ANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRE 300 310 320 330 340 350 370 380 390 400 410 KIAA01 LYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 360 370 380 390 400 410 >>gi|114670845|ref|XP_511724.2| PREDICTED: similar to DE (543 aa) initn: 2654 init1: 2654 opt: 2654 Z-score: 3136.9 bits: 589.8 E(): 5e-166 Smith-Waterman score: 2654; 99.757% identity (99.757% similar) in 412 aa overlap (1-412:132-543) 10 20 30 KIAA01 IMATTATMATSGSARKRLLKEEDMTKVEFE :::::::::::::::::::::::::::::: gi|114 RQRQRGRQRQRGRQRQRGRQRQRGRQRQRGIMATTATMATSGSARKRLLKEEDMTKVEFE 110 120 130 140 150 160 40 50 60 70 80 90 KIAA01 TSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 TSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKT 170 180 190 200 210 220 100 110 120 130 140 150 KIAA01 ATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 ATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGED 230 240 250 260 270 280 160 170 180 190 200 210 KIAA01 IRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 IRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLP 290 300 310 320 330 340 220 230 240 250 260 270 KIAA01 PATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLC 350 360 370 380 390 400 280 290 300 310 320 330 KIAA01 DLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 DLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASR 410 420 430 440 450 460 340 350 360 370 380 390 KIAA01 VLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRIL ::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::: gi|114 VLISTDVWARGLDVPQVSLIINYDLPNNRELSIHRIGRSGRYGRKGVAINFVKNDDIRIL 470 480 490 500 510 520 400 410 KIAA01 RDIEQYYSTQIDEMPMNVADLI :::::::::::::::::::::: gi|114 RDIEQYYSTQIDEMPMNVADLI 530 540 >>gi|114794876|pdb|2J0Q|A Chain A, The Crystal Structure (410 aa) initn: 2652 init1: 2652 opt: 2652 Z-score: 3136.2 bits: 589.3 E(): 5.5e-166 Smith-Waterman score: 2652; 100.000% identity (100.000% similar) in 410 aa overlap (3-412:1-410) 10 20 30 40 50 60 KIAA01 IMATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 ATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFE 10 20 30 40 50 70 80 90 100 110 120 KIAA01 KPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 KPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELA 60 70 80 90 100 110 130 140 150 160 170 180 KIAA01 VQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 VQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTR 120 130 140 150 160 170 190 200 210 220 230 240 KIAA01 AIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 AIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRI 180 190 200 210 220 230 250 260 270 280 290 300 KIAA01 LVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRE 240 250 260 270 280 290 310 320 330 340 350 360 KIAA01 ANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 ANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRE 300 310 320 330 340 350 370 380 390 400 410 KIAA01 LYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 360 370 380 390 400 410 >>gi|73964736|ref|XP_533130.2| PREDICTED: similar to DEA (411 aa) initn: 2649 init1: 2649 opt: 2649 Z-score: 3132.7 bits: 588.6 E(): 8.6e-166 Smith-Waterman score: 2649; 99.513% identity (100.000% similar) in 411 aa overlap (2-412:1-411) 10 20 30 40 50 60 KIAA01 IMATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFE ::..::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 MAAAATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFE 10 20 30 40 50 70 80 90 100 110 120 KIAA01 KPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 KPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELA 60 70 80 90 100 110 130 140 150 160 170 180 KIAA01 VQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 VQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTR 120 130 140 150 160 170 190 200 210 220 230 240 KIAA01 AIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 AIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRI 180 190 200 210 220 230 250 260 270 280 290 300 KIAA01 LVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 LVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRE 240 250 260 270 280 290 310 320 330 340 350 360 KIAA01 ANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 ANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRE 300 310 320 330 340 350 370 380 390 400 410 KIAA01 LYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 LYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 360 370 380 390 400 410 >>gi|73620773|sp|Q4R3Q1.3|IF4A3_MACFA RecName: Full=Euka (411 aa) initn: 2649 init1: 2649 opt: 2649 Z-score: 3132.7 bits: 588.6 E(): 8.6e-166 Smith-Waterman score: 2649; 99.513% identity (100.000% similar) in 411 aa overlap (2-412:1-411) 10 20 30 40 50 60 KIAA01 IMATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFE ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|736 MATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFE 10 20 30 40 50 70 80 90 100 110 120 KIAA01 KPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELA :::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::: gi|736 KPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPARELA 60 70 80 90 100 110 130 140 150 160 170 180 KIAA01 VQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTR ::::::::.::::::::::::::::::::::::::::::::::::::::::::::::::: gi|736 VQIQKGLLTLGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTR 120 130 140 150 160 170 190 200 210 220 230 240 KIAA01 AIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|736 AIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRI 180 190 200 210 220 230 250 260 270 280 290 300 KIAA01 LVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|736 LVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRE 240 250 260 270 280 290 310 320 330 340 350 360 KIAA01 ANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|736 ANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRE 300 310 320 330 340 350 370 380 390 400 410 KIAA01 LYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|736 LYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 360 370 380 390 400 410 >>gi|42560197|sp|Q91VC3.3|IF4A3_MOUSE RecName: Full=Euka (411 aa) initn: 2648 init1: 2648 opt: 2648 Z-score: 3131.5 bits: 588.4 E(): 1e-165 Smith-Waterman score: 2648; 99.270% identity (100.000% similar) in 411 aa overlap (2-412:1-411) 10 20 30 40 50 60 KIAA01 IMATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFE ::..::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|425 MAANATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFE 10 20 30 40 50 70 80 90 100 110 120 KIAA01 KPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELA ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|425 KPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSVSVLQCLDIQVRETQALILAPTRELA 60 70 80 90 100 110 130 140 150 160 170 180 KIAA01 VQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|425 VQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTR 120 130 140 150 160 170 190 200 210 220 230 240 KIAA01 AIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|425 AIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRI 180 190 200 210 220 230 250 260 270 280 290 300 KIAA01 LVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|425 LVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRE 240 250 260 270 280 290 310 320 330 340 350 360 KIAA01 ANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|425 ANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRE 300 310 320 330 340 350 370 380 390 400 410 KIAA01 LYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|425 LYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 360 370 380 390 400 410 >>gi|496902|emb|CAA56074.1| translation initiation facto (411 aa) initn: 2642 init1: 2642 opt: 2642 Z-score: 3124.4 bits: 587.1 E(): 2.5e-165 Smith-Waterman score: 2642; 99.513% identity (99.757% similar) in 411 aa overlap (2-412:1-411) 10 20 30 40 50 60 KIAA01 IMATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFE ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|496 MATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFE 10 20 30 40 50 70 80 90 100 110 120 KIAA01 KPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|496 KPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELA 60 70 80 90 100 110 130 140 150 160 170 180 KIAA01 VQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|496 VQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTR 120 130 140 150 160 170 190 200 210 220 230 240 KIAA01 AIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRI :::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::: gi|496 AIKMLVLDEADEMLNKGFKEQIYDVYRYLPSATQVVLISATLPHEILEMTNKFMTDPIRI 180 190 200 210 220 230 250 260 270 280 290 300 KIAA01 LVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|496 LVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRE 240 250 260 270 280 290 310 320 330 340 350 360 KIAA01 ANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|496 ANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRE 300 310 320 330 340 350 370 380 390 400 410 KIAA01 LYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI ::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|496 LYIHRIGRSGQYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI 360 370 380 390 400 410 412 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Tue Mar 3 21:42:53 2009 done: Tue Mar 3 21:47:37 2009 Total Scan time: 1520.410 Total Display time: 0.150 Function used was FASTA [version 34.26.5 April 26, 2007]