hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-17340792/chunk_1/iprscan-20080501-17340792.nocrc
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Query sequence: KIAA0107
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00088                                                  96.9    2.4e-24   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00088    1/1     298   381 ..     1    92 []    96.9  2.4e-24

Alignments of top-scoring domains:
SM00088: domain 1 of 1, from 298 to 381: score 96.9, E = 2.4e-24
                   *->qhverLqrkiretnllqlsepYPssislsdlakllglsvpeevEklv
                      +h+++++r++r +++ ql+e+Y +s++l ++a+++g+ v++ ++ ++
    KIAA0107   298    PHYRYYVREMRIHAYSQLLESY-RSLTLGYMAEAFGVGVEF-IDQEL 342  

                   skaIrdgeisakIDqvngivefeevdpryltsnqlaqlaerlkkl<-*
                   s++I++g++++kID vn ive++++d       +++q++e++kk+   
    KIAA0107   343 SRFIAAGRLHCKIDKVNEIVETNRPDS------KNWQYQETIKKG    381  

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