hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-17340792/chunk_1/iprscan-20080501-17340792.nocrc
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Query sequence: KIAA0107
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF01399.17.ls PCI domain                                     107.2    4.6e-29   1
PF01399.17.fs PCI domain                                     105.4    8.7e-29   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF01399.17.fs   1/1     262   366 ..     1   135 []   105.4  8.7e-29
PF01399.17.ls   1/1     262   366 ..     1   135 []   107.2  4.6e-29

Alignments of top-scoring domains:
PF01399.17.fs: domain 1 of 1, from 262 to 366: score 105.4, E = 8.7e-29
                   *->payrdLleafysgdlsdfeeiladhvmAKalkGwqkkeellldpgla
                      pa+r+ l+++y +++s f++ la             ++e  +d   a
    KIAA0107   262    PAVRQYLFSLYECRYSVFFQSLAVV-----------EQEMKKDWLFA 297  

                   ekvwlegdkhledLrrkirelnlrrlakftysapYssislsdlakllgls
                   +        h+++++r++r +++ +l++     +Y+s++l ++a+++g+ 
    KIAA0107   298 P--------HYRYYVREMRIHAYSQLLE-----SYRSLTLGYMAEAFGVG 334  

                   vvedvlqdevEkilsklIrdglirgkIDqvngivvvse<-*
                   v      ++++++ls++I++g++++kID vn+iv++++   
    KIAA0107   335 V------EFIDQELSRFIAAGRLHCKIDKVNEIVETNR    366  

PF01399.17.ls: domain 1 of 1, from 262 to 366: score 107.2, E = 4.6e-29
                   *->payrdLleafysgdlsdfeeiladhvmAKalkGwqkkeellldpgla
                      pa+r+ l+++y +++s f++ la             ++e  +d   a
    KIAA0107   262    PAVRQYLFSLYECRYSVFFQSLAVV-----------EQEMKKDWLFA 297  

                   ekvwlegdkhledLrrkirelnlrrlakftysapYssislsdlakllgls
                   +        h+++++r++r +++ +l++     +Y+s++l ++a+++g+ 
    KIAA0107   298 P--------HYRYYVREMRIHAYSQLLE-----SYRSLTLGYMAEAFGVG 334  

                   vvedvlqdevEkilsklIrdglirgkIDqvngivvvse<-*
                   v      ++++++ls++I++g++++kID vn+iv++++   
    KIAA0107   335 V------EFIDQELSRFIAAGRLHCKIDKVNEIVETNR    366  

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