hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/TIGRFAMs_HMM.LIB.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-17191674/chunk_1/iprscan-20080501-17191674.nocrc
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Query sequence: KIAA0098
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model         Description                               Score    E-value  N 
--------      -----------                               -----    ------- ---
TIGR02343     chap_CCT_epsi: T-complex protein 1, eps  1515.4          0   1

Parsed for domains:
Model         Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------      ------- ----- -----    ----- -----      -----  -------
TIGR02343       1/1      18   549 ..     1   541 []  1515.4        0

Alignments of top-scoring domains:
TIGR02343: domain 1 of 1, from 18 to 549: score 1515.4, E = 0
                   *->sLafDEyGRPFiIikdqDkKkRlkGleAiksnIaAaksvAsiLrtSL
                      +LafDEyGRPF+IikdqD+K+Rl+GleA+ks+I+Aak+vA+++rtSL
    KIAA0098    18    TLAFDEYGRPFLIIKDQDRKSRLMGLEALKSHIMAAKAVANTMRTSL 64   

                   GPkGlDKmLispDGditvTNDGATILeqMdvdnnpIAKLmVeLSkSQDdE
                   GP+GlDKm++++DGd+tvTNDGATIL++Mdvd+ +IAKLmVeLSkSQDdE
    KIAA0098    65 GPNGLDKMMVDKDGDVTVTNDGATILSMMDVDH-QIAKLMVELSKSQDDE 113  

                   IGDGTTGVVVLAgALLeqAekLldkGiHPIkIAeGFekAarvAvehLeeI
                   IGDGTTGVVVLAgALLe+Ae+Lld+GiHPI+IA+G+e+AarvA+ehL++I
    KIAA0098   114 IGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARVAIEHLDKI 163  

                   seeisvdenelnkEpLiqaAkTsLgSKiVskckrrfAEIAVdAVLaVADl
                   s++++vd++  ++EpLiq+AkT+LgSK+V++c+r++AEIAV+AVL+VAD+
    KIAA0098   164 SDSVLVDIK--DTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADM 211  

                   ERrDVdFdLIkvegKVGGsLeDTkLIkGiiidKDfSHPQMpKeVkDkeGs
                   ERrDVdF+LIkvegKVGG+LeDTkLIkG+i+dKDfSHPQMpK+V+D    
    KIAA0098   212 ERRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKKVED---- 257  

                   dGakiAILTCPFEPPKPKTKHkldIssveeYkkLqkyEqqkFkEMiddiK
                     akiAILTCPFEPPKPKTKHkld++sve+Yk+LqkyE++kF+EMi++iK
    KIAA0098   258 --AKIAILTCPFEPPKPKTKHKLDVTSVEDYKALQKYEKEKFEEMIQQIK 305  

                   ksGAniviCQWGFDDEANhLLLqndLPAVRWVGGqELELIAiaTGGrIVP
                   ++GAn++iCQWGFDDEANhLLLqn+LPAVRWVGG+E+ELIAiaTGGrIVP
    KIAA0098   306 ETGANLAICQWGFDDEANHLLLQNNLPAVRWVGGPEIELIAIATGGRIVP 355  

                   RFeeLsedkLGkAglVrEisFGTtkdrmLvIEqcknSKAVTiliRGgNkm
                   RF+eL+++kLG+AglV+EisFGTtkd+mLvIEqcknS+AVTi+iRGgNkm
    KIAA0098   356 RFSELTAEKLGFAGLVQEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKM 405  

                   iieEAkRSihDALCVvRNLiknsriVYGGGaAEisCSLAVsqeADKysgv
                   iieEAkRS+hDALCV+RNLi+++r+VYGGGaAEisC+LAVsqeADK++++
    KIAA0098   406 IIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTL 455  

                   EqYAiRaFAdALeeIPmaLAeNSGldPIetlselkslQlkeknpalGvDC
                   EqYA+RaFAdALe+IPmaL+eNSG++PI+t++e++++Q+ke+npalG+DC
    KIAA0098   456 EQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRARQVKEMNPALGIDC 505  

                   lgeGtnDMkeqkVfetligKkqQiqLATQlVkMILKIDdVispg<-*
                   l++GtnDMk+q+V+etligKkqQi+LATQ+V+MILKIDd+++pg   
    KIAA0098   506 LHKGTNDMKQQHVIETLIGKKQQISLATQMVRMILKIDDIRKPG    549  

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