# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/ha01471.fasta.nr -Q ../query/KIAA0095.ptfa /cdna2/lib/nr/nr 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
KIAA0095, 832 aa
vs /cdna2/lib/nr/nr library
2693465022 residues in 7827732 sequences
statistics sampled from 60000 to 7827120 sequences
Expectation_n fit: rho(ln(x))= 5.1496+/-0.000183; mu= 13.2239+/- 0.010
mean_var=72.5109+/-14.183, 0's: 33 Z-trim: 35 B-trim: 99 in 1/66
Lambda= 0.150617
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 38, opt: 26, open/ext: -10/-2, width: 16
The best scores are: opt bits E(7827732)
gi|114662650|ref|XP_510982.2| PREDICTED: nucleopor ( 921) 5388 1180.6 0
gi|116242684|sp|Q8N1F7.2|NUP93_HUMAN RecName: Full ( 819) 5314 1164.5 0
gi|21706468|gb|AAH34346.1| Nucleoporin 93kDa [Homo ( 819) 5308 1163.2 0
gi|158257956|dbj|BAF84951.1| unnamed protein produ ( 819) 5298 1161.1 0
gi|218546785|sp|Q5R822.2|NUP93_PONAB RecName: Full ( 819) 5289 1159.1 0
gi|55730735|emb|CAH92088.1| hypothetical protein [ ( 819) 5274 1155.8 0
gi|73949816|ref|XP_535293.2| PREDICTED: similar to ( 819) 5246 1149.8 0
gi|218546716|sp|A5PJZ5.1|NUP93_BOVIN RecName: Full ( 819) 5245 1149.5 0
gi|148679173|gb|EDL11120.1| nucleoporin 93, isofor ( 852) 5240 1148.5 0
gi|46577036|sp|Q8BJ71.1|NUP93_MOUSE RecName: Full= ( 819) 5227 1145.6 0
gi|81884199|sp|Q66HC5.1|NUP93_RAT RecName: Full=Nu ( 819) 5227 1145.6 0
gi|18606331|gb|AAH23140.1| Nucleoporin 93 [Mus mus ( 819) 5222 1144.5 0
gi|149699151|ref|XP_001493370.1| PREDICTED: simila ( 819) 5217 1143.5 0
gi|148679174|gb|EDL11121.1| nucleoporin 93, isofor ( 822) 5209 1141.7 0
gi|149032456|gb|EDL87347.1| rCG39108, isoform CRA_ ( 822) 5203 1140.4 0
gi|126296177|ref|XP_001365246.1| PREDICTED: simila ( 819) 5146 1128.0 0
gi|149639909|ref|XP_001508135.1| PREDICTED: simila ( 819) 5125 1123.5 0
gi|55730107|emb|CAH91778.1| hypothetical protein [ ( 880) 5068 1111.1 0
gi|118096238|ref|XP_001232547.1| PREDICTED: nucleo ( 819) 4945 1084.3 0
gi|74141793|dbj|BAE40970.1| unnamed protein produc ( 758) 4839 1061.3 0
gi|46576971|sp|Q7ZX96.1|NUP93_XENLA RecName: Full= ( 820) 4646 1019.4 0
gi|82185816|sp|Q6NX12.1|NUP93_XENTR RecName: Full= ( 820) 4644 1018.9 0
gi|73949822|ref|XP_863067.1| PREDICTED: similar to ( 730) 4636 1017.2 0
gi|94732200|emb|CAK03943.1| dead eye [Danio rerio] ( 820) 4626 1015.0 0
gi|46576970|sp|Q7ZU29.1|NUP93_DANRE RecName: Full= ( 820) 4620 1013.7 0
gi|1679792|gb|AAB61137.1| Allele: hi4 [Danio rerio ( 820) 4595 1008.3 0
gi|1490628|gb|AAB49669.1| An4a gi|148230897|re ( 820) 4592 1007.6 0
gi|193786487|dbj|BAG51770.1| unnamed protein produ ( 696) 4555 999.6 0
gi|76445902|gb|ABA42813.1| dead eye [Salmo salar] ( 820) 4555 999.6 0
gi|76445913|gb|ABA42823.1| dead eye [Salmo salar] ( 820) 4549 998.3 0
gi|76445923|gb|ABA42832.1| dead eye [Oncorhynchus ( 819) 4543 997.0 0
gi|67968025|dbj|BAE00494.1| unnamed protein produc ( 696) 4542 996.7 0
gi|54288767|gb|AAV31759.1| dead eye protein [Monop ( 820) 4528 993.7 0
gi|73949820|ref|XP_863041.1| PREDICTED: similar to ( 696) 4487 984.8 0
gi|26337305|dbj|BAC32337.1| unnamed protein produc ( 699) 4446 975.9 0
gi|47221890|emb|CAF98902.1| unnamed protein produc ( 905) 3432 755.6 2e-215
gi|210121668|gb|EEA69379.1| hypothetical protein B ( 829) 3275 721.5 3.5e-205
gi|60099135|emb|CAH65398.1| hypothetical protein [ ( 498) 3011 663.9 4.4e-188
gi|156220687|gb|EDO41551.1| predicted protein [Nem ( 817) 2848 628.7 3e-177
gi|115749080|ref|XP_784714.2| PREDICTED: similar t ( 811) 2560 566.1 2e-158
gi|221131750|ref|XP_002164359.1| PREDICTED: simila ( 814) 2537 561.1 6.5e-157
gi|198434694|ref|XP_002131359.1| PREDICTED: simila ( 824) 2501 553.3 1.5e-154
gi|210130035|gb|EEA77707.1| hypothetical protein B ( 815) 2460 544.4 7.1e-152
gi|190589760|gb|EDV29782.1| hypothetical protein T ( 828) 2292 507.9 7e-141
gi|212517883|gb|EEB19712.1| Nuclear pore complex p ( 821) 2202 488.3 5.4e-135
gi|108871995|gb|EAT36220.1| nuclear pore complex p ( 811) 2170 481.4 6.6e-133
gi|167862467|gb|EDS25850.1| nuclear pore complex p ( 815) 2156 478.3 5.5e-132
gi|215508997|gb|EEC18450.1| nuclear pore complex p ( 802) 2121 470.7 1.1e-129
gi|156537474|ref|XP_001607183.1| PREDICTED: simila ( 809) 2083 462.5 3.2e-127
gi|157018324|gb|EAA07366.4| AGAP003459-PA [Anophel ( 829) 2010 446.6 2e-122
>>gi|114662650|ref|XP_510982.2| PREDICTED: nucleoporin 9 (921 aa)
initn: 5388 init1: 5388 opt: 5388 Z-score: 6320.6 bits: 1180.6 E(): 0
Smith-Waterman score: 5388; 99.880% identity (100.000% similar) in 832 aa overlap (1-832:90-921)
10 20 30
KIAA00 AAETAVAQGSASPMDTEGFGELLQQAEQLA
::::::::::::::::::::::::::::::
gi|114 TLTTDHKPPQWDPVYSPKIPVLGTSVPRHSAAETAVAQGSASPMDTEGFGELLQQAEQLA
60 70 80 90 100 110
40 50 60 70 80 90
KIAA00 AETEGISELPHVERNLQEIQQAGERLRSRTLTRTSQETADVKASVLLGSRGLDISHISQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 AETEGISELPHVERNLQEIQQAGERLRSRTLTRTSQETADVKASVLLGSRGLDISHISQR
120 130 140 150 160 170
100 110 120 130 140 150
KIAA00 LESLSAATTFEPLEPVKDTDIQGFLKNEKDNALLSAIEESRKRTFGMAEEYHRESMLVEW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 LESLSAATTFEPLEPVKDTDIQGFLKNEKDNALLSAIEESRKRTFGMAEEYHRESMLVEW
180 190 200 210 220 230
160 170 180 190 200 210
KIAA00 EQVKQRILHTLLASGEDALDFTQESEPSYISDVGPPGRSSLDNIEMAYARQIYIYNEKIV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 EQVKQRILHTLLASGEDALDFTQESEPSYISDVGPPGRSSLDNIEMAYARQIYIYNEKIV
240 250 260 270 280 290
220 230 240 250 260 270
KIAA00 NGHLQPNLVDLCASVAELDDKSISDMWTMVKQMTDVLLTPATDALKNRSSVEVRMEFVRQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 NGHLQPNLVDLCASVAELDDKSISDMWTMVKQMTDVLLTPATDALKNRSSVEVRMEFVRQ
300 310 320 330 340 350
280 290 300 310 320 330
KIAA00 ALAYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPAPLPGLQDGEVEGHP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 ALAYLEQSYKNYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPAPLPGLQDGEVEGHP
360 370 380 390 400 410
340 350 360 370 380 390
KIAA00 VWALIYYCMRCGDLLAASQVVNRAQHQLGEFKTWFQEYMNSKDRRLSPATENKLRLHYRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 VWALIYYCMRCGDLLAASQVVNRAQHQLGEFKTWFQEYMNSKDRRLSPATENKLRLHYRR
420 430 440 450 460 470
400 410 420 430 440 450
KIAA00 ALRNNTDPYKRAVYCIIGRCDVTDNQSEVADKTEDYLWLKLNQVCFDDDGTSSPQDRLTL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 ALRNNTDPYKRAVYCIIGRCDVTDNQSEVADKTEDYLWLKLNQVCFDDDGTSSPQDRLTL
480 490 500 510 520 530
460 470 480 490 500 510
KIAA00 SQFQKQLLEDYGESHFTVNQQPFLYFQVLFLTAQFEAAVAFLFRMERLRCHAVHVALVLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 SQFQKQLLEDYGESHFTVNQQPFLYFQVLFLTAQFEAAVAFLFRMERLRCHAVHVALVLF
540 550 560 570 580 590
520 530 540 550 560 570
KIAA00 ELKLLLKSSGQSAQLLSHEPGDPPCLRRLNFVRLLMLYTRKFESTDPREALQYFYFLRDE
:::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::
gi|114 ELKLLLKSSGQSAQLLSHEPGDPPCMRRLNFVRLLMLYTRKFESTDPREALQYFYFLRDE
600 610 620 630 640 650
580 590 600 610 620 630
KIAA00 KDSQGENMFLRCVSELVIESREFDMILGKLENDGSRKPGVIDKFTSDTKPIINKVASVAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 KDSQGENMFLRCVSELVIESREFDMILGKLENDGSRKPGVIDKFTSDTKPIINKVASVAE
660 670 680 690 700 710
640 650 660 670 680 690
KIAA00 NKGLFEEAAKLYDLAKNADKVLELMNKLLSPVVPQISAPQSNKERLKNMALSIAERYRAQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 NKGLFEEAAKLYDLAKNADKVLELMNKLLSPVVPQISAPQSNKERLKNMALSIAERYRAQ
720 730 740 750 760 770
700 710 720 730 740 750
KIAA00 GISANKFVDSTFYLLLDLITFFDEYHSGHIDRAFDIIERLKLVPLNQESVEERVAAFRNF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 GISANKFVDSTFYLLLDLITFFDEYHSGHIDRAFDIIERLKLVPLNQESVEERVAAFRNF
780 790 800 810 820 830
760 770 780 790 800 810
KIAA00 SDEIRHNLSEVLLATMNILFTQFKRLKGTSPSSSSRPQRVIEDRDSQLRSQARTLITFAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 SDEIRHNLSEVLLATMNILFTQFKRLKGTSPSSSSRPQRVIEDRDSQLRSQARTLITFAG
840 850 860 870 880 890
820 830
KIAA00 MIPYRTSGDTNARLVQMEVLMN
::::::::::::::::::::::
gi|114 MIPYRTSGDTNARLVQMEVLMN
900 910 920
>>gi|116242684|sp|Q8N1F7.2|NUP93_HUMAN RecName: Full=Nuc (819 aa)
initn: 5314 init1: 5314 opt: 5314 Z-score: 6234.4 bits: 1164.5 E(): 0
Smith-Waterman score: 5314; 100.000% identity (100.000% similar) in 819 aa overlap (14-832:1-819)
10 20 30 40 50 60
KIAA00 AAETAVAQGSASPMDTEGFGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLRSRT
:::::::::::::::::::::::::::::::::::::::::::::::
gi|116 MDTEGFGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLRSRT
10 20 30 40
70 80 90 100 110 120
KIAA00 LTRTSQETADVKASVLLGSRGLDISHISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 LTRTSQETADVKASVLLGSRGLDISHISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKD
50 60 70 80 90 100
130 140 150 160 170 180
KIAA00 NALLSAIEESRKRTFGMAEEYHRESMLVEWEQVKQRILHTLLASGEDALDFTQESEPSYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 NALLSAIEESRKRTFGMAEEYHRESMLVEWEQVKQRILHTLLASGEDALDFTQESEPSYI
110 120 130 140 150 160
190 200 210 220 230 240
KIAA00 SDVGPPGRSSLDNIEMAYARQIYIYNEKIVNGHLQPNLVDLCASVAELDDKSISDMWTMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 SDVGPPGRSSLDNIEMAYARQIYIYNEKIVNGHLQPNLVDLCASVAELDDKSISDMWTMV
170 180 190 200 210 220
250 260 270 280 290 300
KIAA00 KQMTDVLLTPATDALKNRSSVEVRMEFVRQALAYLEQSYKNYTLVTVFGNLHQAQLGGVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 KQMTDVLLTPATDALKNRSSVEVRMEFVRQALAYLEQSYKNYTLVTVFGNLHQAQLGGVP
230 240 250 260 270 280
310 320 330 340 350 360
KIAA00 GTYQLVRSFLNIKLPAPLPGLQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 GTYQLVRSFLNIKLPAPLPGLQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGE
290 300 310 320 330 340
370 380 390 400 410 420
KIAA00 FKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDVTDNQSEVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 FKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDVTDNQSEVA
350 360 370 380 390 400
430 440 450 460 470 480
KIAA00 DKTEDYLWLKLNQVCFDDDGTSSPQDRLTLSQFQKQLLEDYGESHFTVNQQPFLYFQVLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 DKTEDYLWLKLNQVCFDDDGTSSPQDRLTLSQFQKQLLEDYGESHFTVNQQPFLYFQVLF
410 420 430 440 450 460
490 500 510 520 530 540
KIAA00 LTAQFEAAVAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCLRRLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 LTAQFEAAVAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCLRRLN
470 480 490 500 510 520
550 560 570 580 590 600
KIAA00 FVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMILGKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 FVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMILGKL
530 540 550 560 570 580
610 620 630 640 650 660
KIAA00 ENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 ENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLS
590 600 610 620 630 640
670 680 690 700 710 720
KIAA00 PVVPQISAPQSNKERLKNMALSIAERYRAQGISANKFVDSTFYLLLDLITFFDEYHSGHI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 PVVPQISAPQSNKERLKNMALSIAERYRAQGISANKFVDSTFYLLLDLITFFDEYHSGHI
650 660 670 680 690 700
730 740 750 760 770 780
KIAA00 DRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQFKRLKGTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 DRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQFKRLKGTS
710 720 730 740 750 760
790 800 810 820 830
KIAA00 PSSSSRPQRVIEDRDSQLRSQARTLITFAGMIPYRTSGDTNARLVQMEVLMN
::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|116 PSSSSRPQRVIEDRDSQLRSQARTLITFAGMIPYRTSGDTNARLVQMEVLMN
770 780 790 800 810
>>gi|21706468|gb|AAH34346.1| Nucleoporin 93kDa [Homo sap (819 aa)
initn: 5308 init1: 5308 opt: 5308 Z-score: 6227.4 bits: 1163.2 E(): 0
Smith-Waterman score: 5308; 99.878% identity (99.878% similar) in 819 aa overlap (14-832:1-819)
10 20 30 40 50 60
KIAA00 AAETAVAQGSASPMDTEGFGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLRSRT
:::::::::::::::::::::::::::::::::::::::::::::::
gi|217 MDTEGFGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLRSRT
10 20 30 40
70 80 90 100 110 120
KIAA00 LTRTSQETADVKASVLLGSRGLDISHISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|217 LTRTSQETADVKASVLLGSRGLDISHISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKD
50 60 70 80 90 100
130 140 150 160 170 180
KIAA00 NALLSAIEESRKRTFGMAEEYHRESMLVEWEQVKQRILHTLLASGEDALDFTQESEPSYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|217 NALLSAIEESRKRTFGMAEEYHRESMLVEWEQVKQRILHTLLASGEDALDFTQESEPSYI
110 120 130 140 150 160
190 200 210 220 230 240
KIAA00 SDVGPPGRSSLDNIEMAYARQIYIYNEKIVNGHLQPNLVDLCASVAELDDKSISDMWTMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|217 SDVGPPGRSSLDNIEMAYARQIYIYNEKIVNGHLQPNLVDLCASVAELDDKSISDMWTMV
170 180 190 200 210 220
250 260 270 280 290 300
KIAA00 KQMTDVLLTPATDALKNRSSVEVRMEFVRQALAYLEQSYKNYTLVTVFGNLHQAQLGGVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|217 KQMTDVLLTPATDALKNRSSVEVRMEFVRQALAYLEQSYKNYTLVTVFGNLHQAQLGGVP
230 240 250 260 270 280
310 320 330 340 350 360
KIAA00 GTYQLVRSFLNIKLPAPLPGLQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|217 GTYQLVRSFLNIKLPAPLPGLQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGE
290 300 310 320 330 340
370 380 390 400 410 420
KIAA00 FKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDVTDNQSEVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|217 FKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDVTDNQSEVA
350 360 370 380 390 400
430 440 450 460 470 480
KIAA00 DKTEDYLWLKLNQVCFDDDGTSSPQDRLTLSQFQKQLLEDYGESHFTVNQQPFLYFQVLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|217 DKTEDYLWLKLNQVCFDDDGTSSPQDRLTLSQFQKQLLEDYGESHFTVNQQPFLYFQVLF
410 420 430 440 450 460
490 500 510 520 530 540
KIAA00 LTAQFEAAVAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCLRRLN
::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::
gi|217 LTAQFEAAVAFLFRMERLRCHAVHVALVLFELKLLLKSSGQRAQLLSHEPGDPPCLRRLN
470 480 490 500 510 520
550 560 570 580 590 600
KIAA00 FVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMILGKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|217 FVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMILGKL
530 540 550 560 570 580
610 620 630 640 650 660
KIAA00 ENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|217 ENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLS
590 600 610 620 630 640
670 680 690 700 710 720
KIAA00 PVVPQISAPQSNKERLKNMALSIAERYRAQGISANKFVDSTFYLLLDLITFFDEYHSGHI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|217 PVVPQISAPQSNKERLKNMALSIAERYRAQGISANKFVDSTFYLLLDLITFFDEYHSGHI
650 660 670 680 690 700
730 740 750 760 770 780
KIAA00 DRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQFKRLKGTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|217 DRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQFKRLKGTS
710 720 730 740 750 760
790 800 810 820 830
KIAA00 PSSSSRPQRVIEDRDSQLRSQARTLITFAGMIPYRTSGDTNARLVQMEVLMN
::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|217 PSSSSRPQRVIEDRDSQLRSQARTLITFAGMIPYRTSGDTNARLVQMEVLMN
770 780 790 800 810
>>gi|158257956|dbj|BAF84951.1| unnamed protein product [ (819 aa)
initn: 5298 init1: 5298 opt: 5298 Z-score: 6215.6 bits: 1161.1 E(): 0
Smith-Waterman score: 5298; 99.756% identity (99.878% similar) in 819 aa overlap (14-832:1-819)
10 20 30 40 50 60
KIAA00 AAETAVAQGSASPMDTEGFGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLRSRT
:::::::::::::::::::::::::::::::::::::::::::::::
gi|158 MDTEGFGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLRSRT
10 20 30 40
70 80 90 100 110 120
KIAA00 LTRTSQETADVKASVLLGSRGLDISHISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKD
:::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::
gi|158 LTRTSQETADVKASVLLGSRGLDISHISQRLESLSAATTLEPLEPVKDTDIQGFLKNEKD
50 60 70 80 90 100
130 140 150 160 170 180
KIAA00 NALLSAIEESRKRTFGMAEEYHRESMLVEWEQVKQRILHTLLASGEDALDFTQESEPSYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|158 NALLSAIEESRKRTFGMAEEYHRESMLVEWEQVKQRILHTLLASGEDALDFTQESEPSYI
110 120 130 140 150 160
190 200 210 220 230 240
KIAA00 SDVGPPGRSSLDNIEMAYARQIYIYNEKIVNGHLQPNLVDLCASVAELDDKSISDMWTMV
:::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::
gi|158 SDVGPPGRSSLDNIEMAYARQIYIYNEKIVNGHLQPNLVDLCASVAGLDDKSISDMWTMV
170 180 190 200 210 220
250 260 270 280 290 300
KIAA00 KQMTDVLLTPATDALKNRSSVEVRMEFVRQALAYLEQSYKNYTLVTVFGNLHQAQLGGVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|158 KQMTDVLLTPATDALKNRSSVEVRMEFVRQALAYLEQSYKNYTLVTVFGNLHQAQLGGVP
230 240 250 260 270 280
310 320 330 340 350 360
KIAA00 GTYQLVRSFLNIKLPAPLPGLQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|158 GTYQLVRSFLNIKLPAPLPGLQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGE
290 300 310 320 330 340
370 380 390 400 410 420
KIAA00 FKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDVTDNQSEVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|158 FKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDVTDNQSEVA
350 360 370 380 390 400
430 440 450 460 470 480
KIAA00 DKTEDYLWLKLNQVCFDDDGTSSPQDRLTLSQFQKQLLEDYGESHFTVNQQPFLYFQVLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|158 DKTEDYLWLKLNQVCFDDDGTSSPQDRLTLSQFQKQLLEDYGESHFTVNQQPFLYFQVLF
410 420 430 440 450 460
490 500 510 520 530 540
KIAA00 LTAQFEAAVAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCLRRLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|158 LTAQFEAAVAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCLRRLN
470 480 490 500 510 520
550 560 570 580 590 600
KIAA00 FVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMILGKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|158 FVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMILGKL
530 540 550 560 570 580
610 620 630 640 650 660
KIAA00 ENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|158 ENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLS
590 600 610 620 630 640
670 680 690 700 710 720
KIAA00 PVVPQISAPQSNKERLKNMALSIAERYRAQGISANKFVDSTFYLLLDLITFFDEYHSGHI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|158 PVVPQISAPQSNKERLKNMALSIAERYRAQGISANKFVDSTFYLLLDLITFFDEYHSGHI
650 660 670 680 690 700
730 740 750 760 770 780
KIAA00 DRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQFKRLKGTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|158 DRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQFKRLKGTS
710 720 730 740 750 760
790 800 810 820 830
KIAA00 PSSSSRPQRVIEDRDSQLRSQARTLITFAGMIPYRTSGDTNARLVQMEVLMN
::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|158 PSSSSRPQRVIEDRDSQLRSQARTLITFAGMIPYRTSGDTNARLVQMEVLMN
770 780 790 800 810
>>gi|218546785|sp|Q5R822.2|NUP93_PONAB RecName: Full=Nuc (819 aa)
initn: 5289 init1: 5289 opt: 5289 Z-score: 6205.1 bits: 1159.1 E(): 0
Smith-Waterman score: 5289; 99.512% identity (99.756% similar) in 819 aa overlap (14-832:1-819)
10 20 30 40 50 60
KIAA00 AAETAVAQGSASPMDTEGFGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLRSRT
::::::::::::::::::::::::::::::::::::::::::: :::
gi|218 MDTEGFGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLCSRT
10 20 30 40
70 80 90 100 110 120
KIAA00 LTRTSQETADVKASVLLGSRGLDISHISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|218 LTRTSQETADVKASVLLGSRGLDISHISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKD
50 60 70 80 90 100
130 140 150 160 170 180
KIAA00 NALLSAIEESRKRTFGMAEEYHRESMLVEWEQVKQRILHTLLASGEDALDFTQESEPSYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|218 NALLSAIEESRKRTFGMAEEYHRESMLVEWEQVKQRILHTLLASGEDALDFTQESEPSYI
110 120 130 140 150 160
190 200 210 220 230 240
KIAA00 SDVGPPGRSSLDNIEMAYARQIYIYNEKIVNGHLQPNLVDLCASVAELDDKSISDMWTMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|218 SDVGPPGRSSLDNIEMAYARQIYIYNEKIVNGHLQPNLVDLCASVAELDDKSISDMWTMV
170 180 190 200 210 220
250 260 270 280 290 300
KIAA00 KQMTDVLLTPATDALKNRSSVEVRMEFVRQALAYLEQSYKNYTLVTVFGNLHQAQLGGVP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|218 KQMTDVLLTPATDALKNRSSVEVRMEFVRQALAYLEQSYKNYTLVTVFGNLHQAQLGGVP
230 240 250 260 270 280
310 320 330 340 350 360
KIAA00 GTYQLVRSFLNIKLPAPLPGLQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|218 GTYQLVRSFLNIKLPAPLPGLQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGE
290 300 310 320 330 340
370 380 390 400 410 420
KIAA00 FKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDVTDNQSEVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|218 FKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDVTDNQSEVA
350 360 370 380 390 400
430 440 450 460 470 480
KIAA00 DKTEDYLWLKLNQVCFDDDGTSSPQDRLTLSQFQKQLLEDYGESHFTVNQQPFLYFQVLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|218 DKTEDYLWLKLNQVCFDDDGTSSPQDRLTLSQFQKQLLEDYGESHFTVNQQPFLYFQVLF
410 420 430 440 450 460
490 500 510 520 530 540
KIAA00 LTAQFEAAVAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCLRRLN
::::::::.::::::::::::::::::::::::::::::::::::::::::::::.::::
gi|218 LTAQFEAAIAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCMRRLN
470 480 490 500 510 520
550 560 570 580 590 600
KIAA00 FVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMILGKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|218 FVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMILGKL
530 540 550 560 570 580
610 620 630 640 650 660
KIAA00 ENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|218 ENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLS
590 600 610 620 630 640
670 680 690 700 710 720
KIAA00 PVVPQISAPQSNKERLKNMALSIAERYRAQGISANKFVDSTFYLLLDLITFFDEYHSGHI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|218 PVVPQISAPQSNKERLKNMALSIAERYRAQGISANKFVDSTFYLLLDLITFFDEYHSGHI
650 660 670 680 690 700
730 740 750 760 770 780
KIAA00 DRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQFKRLKGTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|218 DRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQFKRLKGTS
710 720 730 740 750 760
790 800 810 820 830
KIAA00 PSSSSRPQRVIEDRDSQLRSQARTLITFAGMIPYRTSGDTNARLVQMEVLMN
:::::::::::::::::::::: :::::::::::::::::::::::::::::
gi|218 PSSSSRPQRVIEDRDSQLRSQACTLITFAGMIPYRTSGDTNARLVQMEVLMN
770 780 790 800 810
>>gi|55730735|emb|CAH92088.1| hypothetical protein [Pong (819 aa)
initn: 5274 init1: 5274 opt: 5274 Z-score: 6187.4 bits: 1155.8 E(): 0
Smith-Waterman score: 5274; 99.267% identity (99.512% similar) in 819 aa overlap (14-832:1-819)
10 20 30 40 50 60
KIAA00 AAETAVAQGSASPMDTEGFGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLRSRT
::::::::::::::::::::::::::::::::::::::::::: :::
gi|557 MDTEGFGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLCSRT
10 20 30 40
70 80 90 100 110 120
KIAA00 LTRTSQETADVKASVLLGSRGLDISHISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|557 LTRTSQETADVKASVLLGSRGLDISHISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKD
50 60 70 80 90 100
130 140 150 160 170 180
KIAA00 NALLSAIEESRKRTFGMAEEYHRESMLVEWEQVKQRILHTLLASGEDALDFTQESEPSYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|557 NALLSAIEESRKRTFGMAEEYHRESMLVEWEQVKQRILHTLLASGEDALDFTQESEPSYI
110 120 130 140 150 160
190 200 210 220 230 240
KIAA00 SDVGPPGRSSLDNIEMAYARQIYIYNEKIVNGHLQPNLVDLCASVAELDDKSISDMWTMV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|557 SDVGPPGRSSLDNIEMAYARQIYIYNEKIVNGHLQPNLVDLCASVAELDDKSISDMWTMV
170 180 190 200 210 220
250 260 270 280 290 300
KIAA00 KQMTDVLLTPATDALKNRSSVEVRMEFVRQALAYLEQSYKNYTLVTVFGNLHQAQLGGVP
:::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::
gi|557 KQMTDVLLTPATDALKNRCSVEVRMEFVRQALAYLEQSYKNYTLVTVFGNLHQAQLGGVP
230 240 250 260 270 280
310 320 330 340 350 360
KIAA00 GTYQLVRSFLNIKLPAPLPGLQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|557 GTYQLVRSFLNIKLPAPLPGLQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGE
290 300 310 320 330 340
370 380 390 400 410 420
KIAA00 FKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDVTDNQSEVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|557 FKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDVTDNQSEVA
350 360 370 380 390 400
430 440 450 460 470 480
KIAA00 DKTEDYLWLKLNQVCFDDDGTSSPQDRLTLSQFQKQLLEDYGESHFTVNQQPFLYFQVLF
:::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::
gi|557 DKTEDYLWPKLNQVCFDDDGTSSPQDRLTLSQFQKQLLEDYGESHFTVNQQPFLYFQVLF
410 420 430 440 450 460
490 500 510 520 530 540
KIAA00 LTAQFEAAVAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCLRRLN
::::::::.::::::::::::::::::::::::::::::::::::::::::::::.::::
gi|557 LTAQFEAAIAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCMRRLN
470 480 490 500 510 520
550 560 570 580 590 600
KIAA00 FVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMILGKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|557 FVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMILGKL
530 540 550 560 570 580
610 620 630 640 650 660
KIAA00 ENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|557 ENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLS
590 600 610 620 630 640
670 680 690 700 710 720
KIAA00 PVVPQISAPQSNKERLKNMALSIAERYRAQGISANKFVDSTFYLLLDLITFFDEYHSGHI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|557 PVVPQISAPQSNKERLKNMALSIAERYRAQGISANKFVDSTFYLLLDLITFFDEYHSGHI
650 660 670 680 690 700
730 740 750 760 770 780
KIAA00 DRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQFKRLKGTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|557 DRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQFKRLKGTS
710 720 730 740 750 760
790 800 810 820 830
KIAA00 PSSSSRPQRVIEDRDSQLRSQARTLITFAGMIPYRTSGDTNARLVQMEVLMN
:::::::::::::::::::::: :::::::::::::::::::::::::::::
gi|557 PSSSSRPQRVIEDRDSQLRSQACTLITFAGMIPYRTSGDTNARLVQMEVLMN
770 780 790 800 810
>>gi|73949816|ref|XP_535293.2| PREDICTED: similar to Nuc (819 aa)
initn: 5246 init1: 5246 opt: 5246 Z-score: 6154.6 bits: 1149.8 E(): 0
Smith-Waterman score: 5246; 98.168% identity (99.878% similar) in 819 aa overlap (14-832:1-819)
10 20 30 40 50 60
KIAA00 AAETAVAQGSASPMDTEGFGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLRSRT
:::::::::::::::::::::::::::::::::::::::::::::::
gi|739 MDTEGFGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLRSRT
10 20 30 40
70 80 90 100 110 120
KIAA00 LTRTSQETADVKASVLLGSRGLDISHISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 LTRTSQETADVKASVLLGSRGLDISHISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKD
50 60 70 80 90 100
130 140 150 160 170 180
KIAA00 NALLSAIEESRKRTFGMAEEYHRESMLVEWEQVKQRILHTLLASGEDALDFTQESEPSYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 NALLSAIEESRKRTFGMAEEYHRESMLVEWEQVKQRILHTLLASGEDALDFTQESEPSYI
110 120 130 140 150 160
190 200 210 220 230 240
KIAA00 SDVGPPGRSSLDNIEMAYARQIYIYNEKIVNGHLQPNLVDLCASVAELDDKSISDMWTMV
:::: :::::::.::::::::::::::::::::::::::.:::::::::::.::::::::
gi|739 SDVGLPGRSSLDSIEMAYARQIYIYNEKIVNGHLQPNLVELCASVAELDDKNISDMWTMV
170 180 190 200 210 220
250 260 270 280 290 300
KIAA00 KQMTDVLLTPATDALKNRSSVEVRMEFVRQALAYLEQSYKNYTLVTVFGNLHQAQLGGVP
::::::::.:::::::.:::::::::::::::::::::::::::::::::::::::::::
gi|739 KQMTDVLLVPATDALKSRSSVEVRMEFVRQALAYLEQSYKNYTLVTVFGNLHQAQLGGVP
230 240 250 260 270 280
310 320 330 340 350 360
KIAA00 GTYQLVRSFLNIKLPAPLPGLQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGE
::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::
gi|739 GTYQLVRSFLNIKLPAPLPGLQDGEVEGHPVWALIYYCMRCGDLFAASQVVNRAQHQLGE
290 300 310 320 330 340
370 380 390 400 410 420
KIAA00 FKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDVTDNQSEVA
:::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::
gi|739 FKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDITDNQSEVA
350 360 370 380 390 400
430 440 450 460 470 480
KIAA00 DKTEDYLWLKLNQVCFDDDGTSSPQDRLTLSQFQKQLLEDYGESHFTVNQQPFLYFQVLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 DKTEDYLWLKLNQVCFDDDGTSSPQDRLTLSQFQKQLLEDYGESHFTVNQQPFLYFQVLF
410 420 430 440 450 460
490 500 510 520 530 540
KIAA00 LTAQFEAAVAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCLRRLN
::::::::.::::::::::::::::::::::::::::::::::::::::::::::.::::
gi|739 LTAQFEAAIAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCVRRLN
470 480 490 500 510 520
550 560 570 580 590 600
KIAA00 FVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMILGKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 FVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMILGKL
530 540 550 560 570 580
610 620 630 640 650 660
KIAA00 ENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:::
gi|739 ENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNRLLS
590 600 610 620 630 640
670 680 690 700 710 720
KIAA00 PVVPQISAPQSNKERLKNMALSIAERYRAQGISANKFVDSTFYLLLDLITFFDEYHSGHI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|739 PVVPQISAPQSNKERLKNMALSIAERYRAQGISANKFVDSTFYLLLDLITFFDEYHSGHI
650 660 670 680 690 700
730 740 750 760 770 780
KIAA00 DRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQFKRLKGTS
:::::::.:::::::::::::::::::::::::.::::::::::::::::::::::::::
gi|739 DRAFDIIDRLKLVPLNQESVEERVAAFRNFSDEVRHNLSEVLLATMNILFTQFKRLKGTS
710 720 730 740 750 760
790 800 810 820 830
KIAA00 PSSSSRPQRVIEDRDSQLRSQARTLITFAGMIPYRTSGDTNARLVQMEVLMN
:::.:::::::::::::::::::.::::::::::::::::::::::::::::
gi|739 PSSASRPQRVIEDRDSQLRSQARALITFAGMIPYRTSGDTNARLVQMEVLMN
770 780 790 800 810
>>gi|218546716|sp|A5PJZ5.1|NUP93_BOVIN RecName: Full=Nuc (819 aa)
initn: 5245 init1: 5245 opt: 5245 Z-score: 6153.4 bits: 1149.5 E(): 0
Smith-Waterman score: 5245; 97.924% identity (100.000% similar) in 819 aa overlap (14-832:1-819)
10 20 30 40 50 60
KIAA00 AAETAVAQGSASPMDTEGFGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLRSRT
:::::::::::::::::::::::::::::::::::::::::::::::
gi|218 MDTEGFGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLRSRT
10 20 30 40
70 80 90 100 110 120
KIAA00 LTRTSQETADVKASVLLGSRGLDISHISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|218 LTRTSQETADVKASVLLGSRGLDISHISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKD
50 60 70 80 90 100
130 140 150 160 170 180
KIAA00 NALLSAIEESRKRTFGMAEEYHRESMLVEWEQVKQRILHTLLASGEDALDFTQESEPSYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|218 NALLSAIEESRKRTFGMAEEYHRESMLVEWEQVKQRILHTLLASGEDALDFTQESEPSYI
110 120 130 140 150 160
190 200 210 220 230 240
KIAA00 SDVGPPGRSSLDNIEMAYARQIYIYNEKIVNGHLQPNLVDLCASVAELDDKSISDMWTMV
::.:::::::::.:::::::::::::::::::::::::.::::::.:::::.:::::.::
gi|218 SDAGPPGRSSLDSIEMAYARQIYIYNEKIVNGHLQPNLLDLCASVTELDDKNISDMWAMV
170 180 190 200 210 220
250 260 270 280 290 300
KIAA00 KQMTDVLLTPATDALKNRSSVEVRMEFVRQALAYLEQSYKNYTLVTVFGNLHQAQLGGVP
::::::::.:::::::.:.:::::::::::::.:::::::::::::::::::::::::::
gi|218 KQMTDVLLVPATDALKSRNSVEVRMEFVRQALGYLEQSYKNYTLVTVFGNLHQAQLGGVP
230 240 250 260 270 280
310 320 330 340 350 360
KIAA00 GTYQLVRSFLNIKLPAPLPGLQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|218 GTYQLVRSFLNIKLPAPLPGLQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGE
290 300 310 320 330 340
370 380 390 400 410 420
KIAA00 FKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDVTDNQSEVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|218 FKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDVTDNQSEVA
350 360 370 380 390 400
430 440 450 460 470 480
KIAA00 DKTEDYLWLKLNQVCFDDDGTSSPQDRLTLSQFQKQLLEDYGESHFTVNQQPFLYFQVLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|218 DKTEDYLWLKLNQVCFDDDGTSSPQDRLTLSQFQKQLLEDYGESHFTVNQQPFLYFQVLF
410 420 430 440 450 460
490 500 510 520 530 540
KIAA00 LTAQFEAAVAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCLRRLN
::::::::.::::::::::::::::::::::::::::::::::::::::::::::.::::
gi|218 LTAQFEAAIAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCMRRLN
470 480 490 500 510 520
550 560 570 580 590 600
KIAA00 FVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMILGKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|218 FVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMILGKL
530 540 550 560 570 580
610 620 630 640 650 660
KIAA00 ENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|218 ENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLS
590 600 610 620 630 640
670 680 690 700 710 720
KIAA00 PVVPQISAPQSNKERLKNMALSIAERYRAQGISANKFVDSTFYLLLDLITFFDEYHSGHI
:.::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|218 PIVPQISAPQSNKERLKNMALSIAERYRAQGISANKFVDSTFYLLLDLITFFDEYHSGHI
650 660 670 680 690 700
730 740 750 760 770 780
KIAA00 DRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQFKRLKGTS
:::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|218 DRAFDIIDRLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQFKRLKGTS
710 720 730 740 750 760
790 800 810 820 830
KIAA00 PSSSSRPQRVIEDRDSQLRSQARTLITFAGMIPYRTSGDTNARLVQMEVLMN
:::..::::::::::::::::::.::::::::::::::::::::::::::::
gi|218 PSSATRPQRVIEDRDSQLRSQARALITFAGMIPYRTSGDTNARLVQMEVLMN
770 780 790 800 810
>>gi|148679173|gb|EDL11120.1| nucleoporin 93, isoform CR (852 aa)
initn: 5240 init1: 5240 opt: 5240 Z-score: 6147.3 bits: 1148.5 E(): 0
Smith-Waterman score: 5240; 97.333% identity (99.758% similar) in 825 aa overlap (8-832:28-852)
10 20 30 40
KIAA00 AAETAVAQGSASPMDTEGFGELLQQAEQLAAETEGISELP
..::: :::::::::::::::::::::::::::
gi|148 EEAGSGRRRRQDFKRILKGHSSIHRTQKASASLMDTEGFGELLQQAEQLAAETEGISELP
10 20 30 40 50 60
50 60 70 80 90 100
KIAA00 HVERNLQEIQQAGERLRSRTLTRTSQETADVKASVLLGSRGLDISHISQRLESLSAATTF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 HVERNLQEIQQAGERLRSRTLTRTSQETADVKASVLLGSRGLDISHISQRLESLSAATTF
70 80 90 100 110 120
110 120 130 140 150 160
KIAA00 EPLEPVKDTDIQGFLKNEKDNALLSAIEESRKRTFGMAEEYHRESMLVEWEQVKQRILHT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 EPLEPVKDTDIQGFLKNEKDNALLSAIEESRKRTFGMAEEYHRESMLVEWEQVKQRILHT
130 140 150 160 170 180
170 180 190 200 210 220
KIAA00 LLASGEDALDFTQESEPSYISDVGPPGRSSLDNIEMAYARQIYIYNEKIVNGHLQPNLVD
::::::::::::::::::::.::.::::::::.:::::::::::::::::.:::::::::
gi|148 LLASGEDALDFTQESEPSYIGDVNPPGRSSLDSIEMAYARQIYIYNEKIVSGHLQPNLVD
190 200 210 220 230 240
230 240 250 260 270 280
KIAA00 LCASVAELDDKSISDMWTMVKQMTDVLLTPATDALKNRSSVEVRMEFVRQALAYLEQSYK
:::::::::::::::::.::::::::.:::::::::.::::::::.::.:::.:::::::
gi|148 LCASVAELDDKSISDMWAMVKQMTDVVLTPATDALKSRSSVEVRMDFVKQALGYLEQSYK
250 260 270 280 290 300
290 300 310 320 330 340
KIAA00 NYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPAPLPGLQDGEVEGHPVWALIYYCMR
::::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::
gi|148 NYTLVTVFGNLHQAQLGGVPGTYQLVRSFLNIKLPAPSPGLQDGEVEGHPVWALIYYCMR
310 320 330 340 350 360
350 360 370 380 390 400
KIAA00 CGDLLAASQVVNRAQHQLGEFKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYK
:::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 CGDLLAASQVVSRAQHQLGEFKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYK
370 380 390 400 410 420
410 420 430 440 450 460
KIAA00 RAVYCIIGRCDVTDNQSEVADKTEDYLWLKLNQVCFDDDGTSSPQDRLTLSQFQKQLLED
:::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 RAVYCIIGRCDITDNQSEVADKTEDYLWLKLNQVCFDDDGTSSPQDRLTLSQFQKQLLED
430 440 450 460 470 480
470 480 490 500 510 520
KIAA00 YGESHFTVNQQPFLYFQVLFLTAQFEAAVAFLFRMERLRCHAVHVALVLFELKLLLKSSG
::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::
gi|148 YGESHFTVNQQPFLYFQVLFLTAQFEAAIAFLFRMERLRCHAVHVALVLFELKLLLKSSG
490 500 510 520 530 540
530 540 550 560 570 580
KIAA00 QSAQLLSHEPGDPPCLRRLNFVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGENMFL
:::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::
gi|148 QSAQLLSHEPGDPPCMRRLNFVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGENMFL
550 560 570 580 590 600
590 600 610 620 630 640
KIAA00 RCVSELVIESREFDMILGKLENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 RCVSELVIESREFDMILGKLENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAK
610 620 630 640 650 660
650 660 670 680 690 700
KIAA00 LYDLAKNADKVLELMNKLLSPVVPQISAPQSNKERLKNMALSIAERYRAQGISANKFVDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|148 LYDLAKNADKVLELMNKLLSPVVPQISAPQSNKERLKNMALSIAERYRAQGISANKFVDS
670 680 690 700 710 720
710 720 730 740 750 760
KIAA00 TFYLLLDLITFFDEYHSGHIDRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIRHNLSE
:::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::
gi|148 TFYLLLDLITFFDEYHSGHIDRAFDIIDRLKLVPLNQESVEERVAAFRNFSDEIRHNLSE
730 740 750 760 770 780
770 780 790 800 810 820
KIAA00 VLLATMNILFTQFKRLKGTSPSSSSRPQRVIEDRDSQLRSQARTLITFAGMIPYRTSGDT
:::::::::::::::::::::::..::::::::::::::::::.::::::::::::::::
gi|148 VLLATMNILFTQFKRLKGTSPSSATRPQRVIEDRDSQLRSQARALITFAGMIPYRTSGDT
790 800 810 820 830 840
830
KIAA00 NARLVQMEVLMN
::::::::::::
gi|148 NARLVQMEVLMN
850
>>gi|46577036|sp|Q8BJ71.1|NUP93_MOUSE RecName: Full=Nucl (819 aa)
initn: 5227 init1: 5227 opt: 5227 Z-score: 6132.2 bits: 1145.6 E(): 0
Smith-Waterman score: 5227; 97.680% identity (99.878% similar) in 819 aa overlap (14-832:1-819)
10 20 30 40 50 60
KIAA00 AAETAVAQGSASPMDTEGFGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLRSRT
:::::::::::::::::::::::::::::::::::::::::::::::
gi|465 MDTEGFGELLQQAEQLAAETEGISELPHVERNLQEIQQAGERLRSRT
10 20 30 40
70 80 90 100 110 120
KIAA00 LTRTSQETADVKASVLLGSRGLDISHISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|465 LTRTSQETADVKASVLLGSRGLDISHISQRLESLSAATTFEPLEPVKDTDIQGFLKNEKD
50 60 70 80 90 100
130 140 150 160 170 180
KIAA00 NALLSAIEESRKRTFGMAEEYHRESMLVEWEQVKQRILHTLLASGEDALDFTQESEPSYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|465 NALLSAIEESRKRTFGMAEEYHRESMLVEWEQVKQRILHTLLASGEDALDFTQESEPSYI
110 120 130 140 150 160
190 200 210 220 230 240
KIAA00 SDVGPPGRSSLDNIEMAYARQIYIYNEKIVNGHLQPNLVDLCASVAELDDKSISDMWTMV
.::.::::::::.:::::::::::::::::.::::::::::::::::::::::::::.::
gi|465 GDVNPPGRSSLDSIEMAYARQIYIYNEKIVSGHLQPNLVDLCASVAELDDKSISDMWAMV
170 180 190 200 210 220
250 260 270 280 290 300
KIAA00 KQMTDVLLTPATDALKNRSSVEVRMEFVRQALAYLEQSYKNYTLVTVFGNLHQAQLGGVP
::::::.:::::::::.::::::::.::.:::.:::::::::::::::::::::::::::
gi|465 KQMTDVVLTPATDALKSRSSVEVRMDFVKQALGYLEQSYKNYTLVTVFGNLHQAQLGGVP
230 240 250 260 270 280
310 320 330 340 350 360
KIAA00 GTYQLVRSFLNIKLPAPLPGLQDGEVEGHPVWALIYYCMRCGDLLAASQVVNRAQHQLGE
::::::::::::::::: :::::::::::::::::::::::::::::::::.::::::::
gi|465 GTYQLVRSFLNIKLPAPSPGLQDGEVEGHPVWALIYYCMRCGDLLAASQVVSRAQHQLGE
290 300 310 320 330 340
370 380 390 400 410 420
KIAA00 FKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDVTDNQSEVA
:::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::
gi|465 FKTWFQEYMNSKDRRLSPATENKLRLHYRRALRNNTDPYKRAVYCIIGRCDITDNQSEVA
350 360 370 380 390 400
430 440 450 460 470 480
KIAA00 DKTEDYLWLKLNQVCFDDDGTSSPQDRLTLSQFQKQLLEDYGESHFTVNQQPFLYFQVLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|465 DKTEDYLWLKLNQVCFDDDGTSSPQDRLTLSQFQKQLLEDYGESHFTVNQQPFLYFQVLF
410 420 430 440 450 460
490 500 510 520 530 540
KIAA00 LTAQFEAAVAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCLRRLN
::::::::.::::::::::::::::::::::::::::::::::::::::::::::.::::
gi|465 LTAQFEAAIAFLFRMERLRCHAVHVALVLFELKLLLKSSGQSAQLLSHEPGDPPCMRRLN
470 480 490 500 510 520
550 560 570 580 590 600
KIAA00 FVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMILGKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|465 FVRLLMLYTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMILGKL
530 540 550 560 570 580
610 620 630 640 650 660
KIAA00 ENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|465 ENDGSRKPGVIDKFTSDTKPIINKVASVAENKGLFEEAAKLYDLAKNADKVLELMNKLLS
590 600 610 620 630 640
670 680 690 700 710 720
KIAA00 PVVPQISAPQSNKERLKNMALSIAERYRAQGISANKFVDSTFYLLLDLITFFDEYHSGHI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|465 PVVPQISAPQSNKERLKNMALSIAERYRAQGISANKFVDSTFYLLLDLITFFDEYHSGHI
650 660 670 680 690 700
730 740 750 760 770 780
KIAA00 DRAFDIIERLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQFKRLKGTS
:::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|465 DRAFDIIDRLKLVPLNQESVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQFKRLKGTS
710 720 730 740 750 760
790 800 810 820 830
KIAA00 PSSSSRPQRVIEDRDSQLRSQARTLITFAGMIPYRTSGDTNARLVQMEVLMN
:::..::::::::::::::::::.::::::::::::::::::::::::::::
gi|465 PSSATRPQRVIEDRDSQLRSQARALITFAGMIPYRTSGDTNARLVQMEVLMN
770 780 790 800 810
832 residues in 1 query sequences
2693465022 residues in 7827732 library sequences
Tcomplib [34.26] (8 proc)
start: Tue Mar 3 20:21:59 2009 done: Tue Mar 3 20:25:38 2009
Total Scan time: 1618.490 Total Display time: 0.530
Function used was FASTA [version 34.26.5 April 26, 2007]