hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-16154612/chunk_1/iprscan-20080501-16154612.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: KIAA0060
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N 
--------        -----------                             -----    ------- ---
PF01182.11.ls   Glucosamine-6-phosphate isomerases/6-   653.0   2.1e-193   1
PF01182.11.fs   Glucosamine-6-phosphate isomerases/6-   651.0   8.6e-193   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
PF01182.11.fs     1/1      43   278 ..     1   238 []   651.0 8.6e-193
PF01182.11.ls     1/1      43   278 ..     1   238 []   653.0 2.1e-193

Alignments of top-scoring domains:
PF01182.11.fs: domain 1 of 1, from 43 to 278: score 651.0, E = 8.6e-193
                   *->waAkyIinrInsfkPtaerpFvLGLPTGstPlgiYkkLielykaGkv
                      waAkyI+nrI++f+P++e++F+LGLPTGstPlg+YkkLie+yk+G++
    KIAA0060    43    WAAKYIRNRIIQFNPGPEKYFTLGLPTGSTPLGCYKKLIEYYKNGDL 89   

                   SFKhVvTFNMDEYvGLpkehpeSYhsFMynnFFnHiDIppENihiLnGnA
                   SFK+V+TFNMDEYvGLp++hpeSYhsFM+nnFF+HiDI+pEN+hiL+GnA
    KIAA0060    90 SFKYVKTFNMDEYVGLPRDHPESYHSFMWNNFFKHIDIHPENTHILDGNA 139  

                   adidaECrnYEeKIksyGkIdLFlGGvGpdGHiAFNEpgSSlaSrTRikt
                   +d++aEC+++EeKIk++G+I+LF+GG+GpdGHiAFNEpgSSl+SrTR+kt
    KIAA0060   140 VDLQAECDAFEEKIKAAGGIELFVGGIGPDGHIAFNEPGSSLVSRTRVKT 189  

                   LtedTilANsRFFdndvtkVPkyALtVGvgTlLDnaeEvmIlvlGkqKal
                   L++dTilAN+RFFd+++tkVP++ALtVGvgT++D a+EvmIl++G++Ka+
    KIAA0060   190 LAMDTILANARFFDGELTKVPTMALTVGVGTVMD-AREVMILITGAHKAF 238  

                   ALqkavegkvNdhmwtvSaLQdHpkvllVCDedAtleLKvK<-*
                   AL+ka+e++vN hmwtvSa+Q+Hp++++VCDedAtleLKvK   
    KIAA0060   239 ALYKAIEEGVN-HMWTVSAFQQHPRTVFVCDEDATLELKVK    278  

PF01182.11.ls: domain 1 of 1, from 43 to 278: score 653.0, E = 2.1e-193
                   *->waAkyIinrInsfkPtaerpFvLGLPTGstPlgiYkkLielykaGkv
                      waAkyI+nrI++f+P++e++F+LGLPTGstPlg+YkkLie+yk+G++
    KIAA0060    43    WAAKYIRNRIIQFNPGPEKYFTLGLPTGSTPLGCYKKLIEYYKNGDL 89   

                   SFKhVvTFNMDEYvGLpkehpeSYhsFMynnFFnHiDIppENihiLnGnA
                   SFK+V+TFNMDEYvGLp++hpeSYhsFM+nnFF+HiDI+pEN+hiL+GnA
    KIAA0060    90 SFKYVKTFNMDEYVGLPRDHPESYHSFMWNNFFKHIDIHPENTHILDGNA 139  

                   adidaECrnYEeKIksyGkIdLFlGGvGpdGHiAFNEpgSSlaSrTRikt
                   +d++aEC+++EeKIk++G+I+LF+GG+GpdGHiAFNEpgSSl+SrTR+kt
    KIAA0060   140 VDLQAECDAFEEKIKAAGGIELFVGGIGPDGHIAFNEPGSSLVSRTRVKT 189  

                   LtedTilANsRFFdndvtkVPkyALtVGvgTlLDnaeEvmIlvlGkqKal
                   L++dTilAN+RFFd+++tkVP++ALtVGvgT++D a+EvmIl++G++Ka+
    KIAA0060   190 LAMDTILANARFFDGELTKVPTMALTVGVGTVMD-AREVMILITGAHKAF 238  

                   ALqkavegkvNdhmwtvSaLQdHpkvllVCDedAtleLKvK<-*
                   AL+ka+e++vN hmwtvSa+Q+Hp++++VCDedAtleLKvK   
    KIAA0060   239 ALYKAIEEGVN-HMWTVSAFQQHPRTVFVCDEDATLELKVK    278  

//