hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-15501794/chunk_1/iprscan-20080501-15501794.nocrc
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Query sequence: KIAA0045
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00119                                                 613.6   6.9e-180   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00119    1/1    1616  2005 .]     1   407 []   613.6 6.9e-180

Alignments of top-scoring domains:
SM00119: domain 1 of 1, from 1616 to 2005: score 613.6, E = 6.9e-180
                   *->nsspddLkkrskeaLeIefvvnehgvgEeglDgGGvtrEFffllske
                      +s ++dL ++++ +LeI++       ++e ++g+G+t+EF++l+s+e
    KIAA0045  1616    ESVMQDLGSSRA-MLEIQY-------ENEVGTGLGPTLEFYALVSQE 1654 

                   lfnptdygLFryspndnae.k.s.kti.YigrlrylLfpnPsagfaneeh
                   l++  d+gL+r ++++ +++k+s+++++Yi++l+ +Lf  P+++ a+++h
    KIAA0045  1655 LQRA-DLGLWRGEEVTLSNpKgSqEGTkYIQNLQ-GLFALPFGRTAKPAH 1702 

                   laav..yFrfiGrvlGkAlyenrllDlrFarpFyKkLLgkpkgtdvtlhD
                   +a+v+  Frf+G++++kA++++rl+Dl++ +pFyK++L+++  t++t hD
    KIAA0045  1703 IAKVkmKFRFLGKLMAKAIMDFRLVDLPLGLPFYKWMLRQE--TSLTSHD 1750 

                   leslDPelyksLvwLi.lvrrKleleeDlseeskslenditeveldmaLt
                   l+++DP++ +s+++L+++vr+K++le+D+s++++sl++ +++++++++  
    KIAA0045  1751 LFDIDPVVARSVYHLEdIVRQKKRLEQDKSQTKESLQYALETLTMNGCSV 1800 

                   FsivlesdfgevkvvELkpGGsnipVTeeNkkEYVhlvieyrlnkgvekq
                   +++ l+++++++ ++ELk+GG++ipVT++N +EY++lvi++ ln+gv++q
    KIAA0045  1801 EDLGLDFTLPGFPNIELKKGGKDIPVTIHNLEEYLRLVIFWALNEGVSRQ 1850 

                   leAFreGFseVipeelLrylFdeeELeLLicGleeeidvddLksnTeyrg
                   ++ Fr+GF+ V+p+++L+y+++ee  +LL++  ++++d+++L++++++++
    KIAA0045  1851 FDSFRDGFESVFPLSHLQYFYPEELDQLLCGSKADTWDAKTLMECCRPDH 1900 

                   gYtensqtirfkkwFWevvesFtneerrkLLqFVTGssrlPASvgGFaaL
                   gYt++s+ +   k+ +e+++sF+ne++r++LqFVTGs+rlP  vgGF++L
    KIAA0045  1901 GYTHDSRAV---KFLFEILSSFDNEQQRLFLQFVTGSPRLP--VGGFRSL 1945 

                   spsNGpqkFtIrkagse.tlsdddrLPtAhTCfNrLkLPpYsSkeiLreK
                   +p      +tI+++++e+t+++dd+LP+++TC+N+LkLP+YsS ei+reK
    KIAA0045  1946 NP-----PLTIVRKTFEsTENPDDFLPSVMTCVNYLKLPDYSSIEIMREK 1990 

                   LLlAInegRiggeGFgls<-*
                   LL+A +e   g+++F+ls   
    KIAA0045  1991 LLIAARE---GQQSFHLS    2005 

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