hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-15230964/chunk_1/iprscan-20080501-15230964.nocrc
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Query sequence: KIAA0029
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF01424.13.fs R3H domain                                      67.9      3e-19   1
PF01424.13.ls R3H domain                                      69.8      8e-18   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF01424.13.fs   1/1     134   187 ..     1    58 []    67.9    3e-19
PF01424.13.ls   1/1     134   187 ..     1    58 []    69.8    8e-18

Alignments of top-scoring domains:
PF01424.13.fs: domain 1 of 1, from 134 to 187: score 67.9, E = 3e-19
                   *->eeeiadfvrvkstgksvflpPMtsyeRkliHqlaeefgdLeseSeGe
                      e+ei+df + ++++ ++++pPMtsy+R+l+H++a++fg L ++++++
    KIAA0029   134    EQEILDF-IGNNESPRKKFPPMTSYHRMLLHRVAAYFG-LDHNVDQS 178  

                   gpkRrvviskk<-*
                   g  ++v+++k+   
    KIAA0029   179 G--KSVIVNKT    187  

PF01424.13.ls: domain 1 of 1, from 134 to 187: score 69.8, E = 8e-18
                   *->eeeiadfvrvkstgksvflpPMtsyeRkliHqlaeefgdLeseSeGe
                      e+ei+df + ++++ ++++pPMtsy+R+l+H++a++fg L ++++++
    KIAA0029   134    EQEILDF-IGNNESPRKKFPPMTSYHRMLLHRVAAYFG-LDHNVDQS 178  

                   gpkRrvviskk<-*
                   g  ++v+++k+   
    KIAA0029   179 G--KSVIVNKT    187  

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