hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-15125948/chunk_1/iprscan-20080501-15125948.nocrc
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Query sequence: KIAA0024
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF03034.6.fs Phosphatidyl serine synthase                   753.8     6e-237   1
PF03034.6.ls Phosphatidyl serine synthase                   755.6   2.9e-224   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF03034.6.fs   1/1     130   408 ..     1   310 []   753.8   6e-237
PF03034.6.ls   1/1     130   408 ..     1   310 []   755.6 2.9e-224

Alignments of top-scoring domains:
PF03034.6.fs: domain 1 of 1, from 130 to 408: score 753.8, E = 6e-237
                   *->PHPAlWRivFGvSVvYllfLqFlLFQtfdDirqflkWLDPkLggave
                      PHPAlWR+vFG+SV+Y+lfL+FlLF++f++++++++WLDP+L++a++
    KIAA0024   130    PHPALWRMVFGLSVLYFLFLVFLLFLNFEQVKSLMYWLDPNLRYATR 176  

                   LpEkmEYgvNCsiispdrkTdrFkNLiwshlDiFafaHFtGWamKALLIR
                   +++ mEY+vNC++i+++r        i+sh+DiFaf+HF+GWamKALLIR
    KIAA0024   177 EADVMEYAVNCHVITWER--------IISHFDIFAFGHFWGWAMKALLIR 218  

                   hwvLCWvISImWEltEltFeHLLPNFaECWWDsiILDVLiCNGlGIwaGM
                   +++LCW+ISI+WEltEl+F+HLLPNFaECWWD++ILD+L+CNG+GIw+GM
    KIAA0024   219 SYGLCWTISITWELTELFFMHLLPNFAECWWDQVILDILLCNGGGIWLGM 268  

                   kicrfLemRtYhWeSIknIpTtrGKiKRavlQFTPaSWskfeWkdskSPa
                   ++crfLemRtYhW+S+k+I+Tt+GKiKRavlQFTPaSW++++W+d   P+
    KIAA0024   269 VVCRFLEMRTYHWASFKDIHTTTGKIKRAVLQFTPASWTYVRWFD---PK 315  

                   sslkRfaaVyllviiWLPPPikRLnFknCDtAHFFqLtELNTFFLKHvfw
                   ss++R+a+Vyl++iiW+                   LtELNTFFLKH+f+
    KIAA0024   316 SSFQRVAGVYLFMIIWQ-------------------LTELNTFFLKHIFV 346  

                   ippkHPvVlwRLIlialIaAPtvRqyYvYltDlkpcKRVGtQCWVflaIc
                   ++++HP++++R+++i+ I+APtvRqyY+YltD ++cKRVGtQCWVf++I+
    KIAA0024   347 FQASHPLSWGRILFIGGITAPTVRQYYAYLTD-TQCKRVGTQCWVFGVIG 395  

                   vlEllICvKfGsh<-*
                   +lE+++C+KfG++   
    KIAA0024   396 FLEAIVCIKFGQD    408  

PF03034.6.ls: domain 1 of 1, from 130 to 408: score 755.6, E = 2.9e-224
                   *->PHPAlWRivFGvSVvYllfLqFlLFQtfdDirqflkWLDPkLggave
                      PHPAlWR+vFG+SV+Y+lfL+FlLF++f++++++++WLDP+L++a++
    KIAA0024   130    PHPALWRMVFGLSVLYFLFLVFLLFLNFEQVKSLMYWLDPNLRYATR 176  

                   LpEkmEYgvNCsiispdrkTdrFkNLiwshlDiFafaHFtGWamKALLIR
                   +++ mEY+vNC++i+++r        i+sh+DiFaf+HF+GWamKALLIR
    KIAA0024   177 EADVMEYAVNCHVITWER--------IISHFDIFAFGHFWGWAMKALLIR 218  

                   hwvLCWvISImWEltEltFeHLLPNFaECWWDsiILDVLiCNGlGIwaGM
                   +++LCW+ISI+WEltEl+F+HLLPNFaECWWD++ILD+L+CNG+GIw+GM
    KIAA0024   219 SYGLCWTISITWELTELFFMHLLPNFAECWWDQVILDILLCNGGGIWLGM 268  

                   kicrfLemRtYhWeSIknIpTtrGKiKRavlQFTPaSWskfeWkdskSPa
                   ++crfLemRtYhW+S+k+I+Tt+GKiKRavlQFTPaSW++++W+d   P+
    KIAA0024   269 VVCRFLEMRTYHWASFKDIHTTTGKIKRAVLQFTPASWTYVRWFD---PK 315  

                   sslkRfaaVyllviiWLPPPikRLnFknCDtAHFFqLtELNTFFLKHvfw
                   ss++R+a+Vyl++iiW+                   LtELNTFFLKH+f+
    KIAA0024   316 SSFQRVAGVYLFMIIWQ-------------------LTELNTFFLKHIFV 346  

                   ippkHPvVlwRLIlialIaAPtvRqyYvYltDlkpcKRVGtQCWVflaIc
                   ++++HP++++R+++i+ I+APtvRqyY+YltD ++cKRVGtQCWVf++I+
    KIAA0024   347 FQASHPLSWGRILFIGGITAPTVRQYYAYLTD-TQCKRVGTQCWVFGVIG 395  

                   vlEllICvKfGsh<-*
                   +lE+++C+KfG++   
    KIAA0024   396 FLEAIVCIKFGQD    408  

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