hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/TIGRFAMs_HMM.LIB.bin Sequence file: /db/iprscan/tmp/20080501/iprscan-20080501-14592264/chunk_1/iprscan-20080501-14592264.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0016 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- TIGR00985 3a0801s04tom: mitochondrial import recep 276.4 1.9e-80 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- TIGR00985 1/1 34 160 .. 1 155 [] 276.4 1.9e-80 Alignments of top-scoring domains: TIGR00985: domain 1 of 1, from 34 to 160: score 276.4, E = 1.9e-80 *->MlgsNktytGLviaaaiaAtaflGYAIYFDyKRRNdPeFRkkLRrra M+g+N+ +iaa++++++f+GY+IYFD+KRR+dP+F+++LR+r+ KIAA0016 34 MVGRNS-----AIAAGVCGALFIGYCIYFDRKRRSDPNFKNRLRERR 75 kkQakaekqeeeLAkevklrkvvreavaelakePdpsdaeekeafFLeeV kkQ+ LAke r a+l+k+Pd++dae++++fFLee+ KIAA0016 76 KKQK--------LAKE-------R---AGLSKLPDLKDAEAVQKFFLEEI 107 qlGEeLlaqqPdkvkeaalhfykAlkVYPqPqdLLsIYqrTvpepifeil qlGEeLlaq+ +++++++h+++A++V++qPq+LL+++q+T+p+p+f+ KIAA0016 108 QLGEELLAQG--EYEKGVDHLTNAIAVCGQPQQLLQVLQQTLPPPVFQ-- 153 illiailP<-* +l+++lP KIAA0016 154 -MLLTKLP 160 //