hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/smart.HMMs.bin Sequence file: /db/iprscan/tmp/20080909/iprscan-20080909-09252279/chunk_1/iprscan-20080909-09252279.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA0013 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- SM00324 199.9 2.3e-55 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- SM00324 1/1 126 299 .. 1 193 [] 199.9 2.3e-55 Alignments of top-scoring domains: SM00324: domain 1 of 1, from 126 to 299: score 199.9, E = 2.3e-55 *->spiPiivekCieylekrGldteGIYRvsGsksrvkeLreafdsgedd ++iP++++ ++ le ++teG++R+sGs+ r+k+L+++ d+ge KIAA0013 126 GHIPSFLVDACTSLED-HIHTEGLFRKSGSVIRLKALKNKVDHGEG- 170 ldsldesiteesedleeydvhdvAglLKlyLReLPePLltfelyeefiea +l+++ + d+AglLK+++ReLPeP+l+ +l+e +++a KIAA0013 171 -------------CLSSAPPCDIAGLLKQFFRELPEPILPADLHEALLKA 207 aklyqieatsrkqseksedeeerlralrellslLPpanratLryLl.HLn + +ee+ +a ++l +lL ++ ++Lry +++L+ KIAA0013 208 QQ---------------LGTEEKNKATLLLSCLLADHTVHVLRYFFnFLR 242 rVaehsevNkMtarNLAivFgPtLlrpp..........ltdikhqnkvve +V+ s++NkM+++NLA++F+P+Ll+ ++++++ ++++++ ++q++vv+ KIAA0013 243 NVSLRSSENKMDSSNLAVIFAPNLLQTSeghekmssntEKKLRLQAAVVQ 292 tlienad<-* tli++a KIAA0013 293 TLIDYAS 299 //