Comparison between the cloned and the revised DNA sequences

Cloned DNA sequence, length = 6016 bp
Revised DNA sequence, length = 2374 bp

<< Positions of primers used in RT-PCR experiment(s) >>

 1 : f NN06085   897 -   917     CCC GGC AGC AAT GGA GAA GTT
     r NN06086  5813 -  5793     CAG GCT GCA GAT GAA GGA GAC
<< Positions of inserion/deletion/mutation(s) in the aligned sequence >>
 1 :  1417 -  5058     3642-bp deletion  (in the revised sequence)
Predicted coding region: colored in green ( 3 - 2357 in the revised sequence).


*- Clone Name -*      1          .         .         .         .         . 50
hh11563               1 GCGCCTCCGCCCGCGCGCCTCCCGGCCTCGCCCGAGGGTGCCTGGGCAGG 50
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)      1 GCGCCTCCGCCCGCGCGCCTCCCGGCCTCGCCCGAGGGTGCCTGGGCAGG 50

                     51          .         .         .         .         . 100
hh11563              51 CGAGGACCCCAGGTTCAGCAGCTGGACATGGAGAACCAACGCTCATCACC 100
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)     51 CGAGGACCCCAGGTTCAGCAGCTGGACATGGAGAACCAACGCTCATCACC 100

                    101          .         .         .         .         . 150
hh11563             101 TCTGTCGTTCCCCAGTGTTCCACAAGAAGAAACCTTACGTCAGGCCCCTG 150
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)    101 TCTGTCGTTCCCCAGTGTTCCACAAGAAGAAACCTTACGTCAGGCCCCTG 150

                    151          .         .         .         .         . 200
hh11563             151 CTGGACTCCCCCGAGAAACTCTGTTCCAATCCCGCGTTCTTCCTCCCAAA 200
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)    151 CTGGACTCCCCCGAGAAACTCTGTTCCAATCCCGCGTTCTTCCTCCCAAA 200

                    201          .         .         .         .         . 250
hh11563             201 GAAATTCCTTCTTTGTCTCCCACCATTCCCCGTCAAGGCTCCCTGCCCCA 250
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)    201 GAAATTCCTTCTTTGTCTCCCACCATTCCCCGTCAAGGCTCCCTGCCCCA 250

                    251          .         .         .         .         . 300
hh11563             251 AACTTCCAGTGCTCCCAAGCAAGAGACTTCTGGCCGGATGCCACATGTGC 300
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)    251 AACTTCCAGTGCTCCCAAGCAAGAGACTTCTGGCCGGATGCCACATGTGC 300

                    301          .         .         .         .         . 350
hh11563             301 TCCAGAAGGGACCCTCACTCCTGTGTTCTGCCGCTTCTGAGCAAGAGACT 350
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)    301 TCCAGAAGGGACCCTCACTCCTGTGTTCTGCCGCTTCTGAGCAAGAGACT 350

                    351          .         .         .         .         . 400
hh11563             351 TCTCTCCAGGGCCCCCTGGCTTCCCAGGAAGGGACCCAGTATCCACCCCC 400
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)    351 TCTCTCCAGGGCCCCCTGGCTTCCCAGGAAGGGACCCAGTATCCACCCCC 400

                    401          .         .         .         .         . 450
hh11563             401 AGCTGCTGCTGAACAAGAAGTCTCCCTTCTCTCCCACTCCCCCCACCACC 450
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)    401 AGCTGCTGCTGAACAAGAAGTCTCCCTTCTCTCCCACTCCCCCCACCACC 450

                    451          .         .         .         .         . 500
hh11563             451 AGGAAGCCCCCGTTCACTCCCCTGAAGCTCCTGAGAAAGACCCCCTGACC 500
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)    451 AGGAAGCCCCCGTTCACTCCCCTGAAGCTCCTGAGAAAGACCCCCTGACC 500

                    501          .         .         .         .         . 550
hh11563             501 CTTTCCCCAACAGTTCCCGAGACTGACATGGACCCGCTGCTCCAGAGCCC 550
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)    501 CTTTCCCCAACAGTTCCCGAGACTGACATGGACCCGCTGCTCCAGAGCCC 550

                    551          .         .         .         .         . 600
hh11563             551 GGTTTCCCAAAAGGACACCCCTTTCCAGATCTCTTCTGCAGTCCAGAAGG 600
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)    551 GGTTTCCCAAAAGGACACCCCTTTCCAGATCTCTTCTGCAGTCCAGAAGG 600

                    601          .         .         .         .         . 650
hh11563             601 AACAGCCGCTCCCCACGGCAGAGATCACCCGCTTGGCTGTGTGGGCTGCC 650
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)    601 AACAGCCGCTCCCCACGGCAGAGATCACCCGCTTGGCTGTGTGGGCTGCC 650

                    651          .         .         .         .         . 700
hh11563             651 GTCCAAGCAGTGGAGAGGAAGCTGGAGGCCCAGGCCATGAGGCTACTGAC 700
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)    651 GTCCAAGCAGTGGAGAGGAAGCTGGAGGCCCAGGCCATGAGGCTACTGAC 700

                    701          .         .         .         .         . 750
hh11563             701 CCTGGAAGGCAGGACGGGGACAAATGAAAAGAAGATAGCCGACTGCGAGA 750
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)    701 CCTGGAAGGCAGGACGGGGACAAATGAAAAGAAGATAGCCGACTGCGAGA 750

                    751          .         .         .         .         . 800
hh11563             751 AGACAGCCGTGGAGTTCGCGAACCATCTGGAGAGCAAGTGGGTCGTGTTG 800
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)    751 AGACAGCCGTGGAGTTCGCGAACCATCTGGAGAGCAAGTGGGTCGTGTTG 800

                    801          .         .         .         .         . 850
hh11563             801 GGGACCCTGCTGCAGGAGTATGGGCTGCTGCAGAGGCGGCTGGAGAACAT 850
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)    801 GGGACCCTGCTGCAGGAGTATGGGCTGCTGCAGAGGCGGCTGGAGAACAT 850

                    851          .         .         .         .         . 900
hh11563             851 GGAGAACCTGCTGAAAAACAGAAATTTCTGGATCCTGCGGCTGCCCCCCG 900
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)    851 GGAGAACCTGCTGAAAAACAGAAATTTCTGGATCCTGCGGCTGCCCCCCG 900

                    901          .         .         .         .         . 950
hh11563             901 GCAGCAATGGAGAAGTTCCCAAGGTCCCTGTCACATTTGATGATGTTGCT 950
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)    901 GCAGCAATGGAGAAGTTCCCAAGGTCCCTGTCACATTTGATGATGTTGCT 950

                    951          .         .         .         .         . 1000
hh11563             951 GTGCACTTCTCGGAGCAGGAGTGGGGAAACCTGTCTGAGTGGCAGAAGGA 1000
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)    951 GTGCACTTCTCGGAGCAGGAGTGGGGAAACCTGTCTGAGTGGCAGAAGGA 1000

                   1001          .         .         .         .         . 1050
hh11563            1001 GCTCTACAAGAACGTGATGAGGGGCAACTACGAGTCCCTGGTTTCCATGG 1050
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)   1001 GCTCTACAAGAACGTGATGAGGGGCAACTACGAGTCCCTGGTTTCCATGG 1050

                   1051          .         .         .         .         . 1100
hh11563            1051 ACTATGCAATTTCCAAACCAGACCTCATGTCACAGATGGAGCGCGGGGAG 1100
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)   1051 ACTATGCAATTTCCAAACCAGACCTCATGTCACAGATGGAGCGCGGGGAG 1100

                   1101          .         .         .         .         . 1150
hh11563            1101 CGGCCCACCATGCAGGAGCAGGAAGACTCTGAGGAGGGCGAAACGCCGAC 1150
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)   1101 CGGCCCACCATGCAGGAGCAGGAAGACTCTGAGGAGGGCGAAACGCCGAC 1150

                   1151          .         .         .         .         . 1200
hh11563            1151 AGATCCCAGTGCTGCGCACGATGGGATCGTGATTAAGATCGAGGTACAGA 1200
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)   1151 AGATCCCAGTGCTGCGCACGATGGGATCGTGATTAAGATCGAGGTACAGA 1200

                   1201          .         .         .         .         . 1250
hh11563            1201 CCAACGACGAGGGCTCAGAAAGTTTGGAGACACCTGAGCCCCTGATGGGA 1250
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)   1201 CCAACGACGAGGGCTCAGAAAGTTTGGAGACACCTGAGCCCCTGATGGGA 1250

                   1251          .         .         .         .         . 1300
hh11563            1251 CAGGTGGAAGAGCACGGCTTCCAGGACTCAGAGCTGGGTGACCCCTGTGG 1300
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)   1251 CAGGTGGAAGAGCACGGCTTCCAGGACTCAGAGCTGGGTGACCCCTGTGG 1300

                   1301          .         .         .         .         . 1350
hh11563            1301 GGAACAGCCAGACCTGGACATGCAGGAGCCAGAGAACACGCTGGAGGAGT 1350
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)   1301 GGAACAGCCAGACCTGGACATGCAGGAGCCAGAGAACACGCTGGAGGAGT 1350

                   1351          .         .         .         .         . 1400
hh11563            1351 CCACGGAAGGCTCCAGCGAGTTCAGCGAACTGAAGCAGATGCTGGTGCAG 1400
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)   1351 CCACGGAAGGCTCCAGCGAGTTCAGCGAACTGAAGCAGATGCTGGTGCAG 1400

                   1401          .         .         .         .         . 1450
hh11563            1401 CAGAGGAACTGCACGGGTGAGTGCTGGGCGGGGACGGCCGGGGAAGGGTT 1450
                        ||||||||||||||||                                  
hh11563(revised)   1401 CAGAGGAACTGCACGG---------------------------------- 1416

                   1451          .         .         .         .         . 1500
hh11563            1451 GCCATGAGGCCTCCCAGAGGGCCCCTGCCCCCTGGGAAAGCTGTGGTTCC 1500
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   1501          .         .         .         .         . 1550
hh11563            1501 TTCAGAGAGGTAGCTGGACACTGATGGGGCAACAGGTGGGAAAGAATTAC 1550
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   1551          .         .         .         .         . 1600
hh11563            1551 CAAGCACGGCCTCGAGTATAGGCTCCGTGACGCGGGACTTGTAAGAATCC 1600
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   1601          .         .         .         .         . 1650
hh11563            1601 GTCTCCAACCTAGGAAAGAAGTGGTTACATCTAAAGACTGGTTCAGGCAA 1650
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   1651          .         .         .         .         . 1700
hh11563            1651 AGGGATCTCAGAGCTCACCTATCCCACCCCTCATTTTACAGACAGAGGTT 1700
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   1701          .         .         .         .         . 1750
hh11563            1701 AAATAGATGGGGCAAGGCCACACAGAGAGTGGCAAAGCTAGAACTCTCCC 1750
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   1751          .         .         .         .         . 1800
hh11563            1751 AACGTGTCCTTGATCATCTCATATCACCCTAGAAGCCTCAACTACCTTGA 1800
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   1801          .         .         .         .         . 1850
hh11563            1801 AGATTTCAGCCCTGGAGAGCATGGTTTTCAAATAACAATAGCACCGGCAT 1850
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   1851          .         .         .         .         . 1900
hh11563            1851 TCTGTGGTCGAACCTAGTCTTCATTTTTGTTTAATTATAAAACTTTATCA 1900
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   1901          .         .         .         .         . 1950
hh11563            1901 CCATGCTGCTCACTCTTGCTCCTTCTGAGTTCAAGAACAGTAAGGCACTG 1950
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   1951          .         .         .         .         . 2000
hh11563            1951 GGGCTCACGGTGGCCTGATCCCAGGACATCTTTCGTGATGGATTTTCTGA 2000
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   2001          .         .         .         .         . 2050
hh11563            2001 TGCTGAGCCATCCTGGCAGGCCCGGGAAAAGCCCTACTTGATCATCATGA 2050
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   2051          .         .         .         .         . 2100
hh11563            2051 TGTATTTTTTGAATTCACTATTGGACTTAGGTAATAAATATTTTACTCAA 2100
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   2101          .         .         .         .         . 2150
hh11563            2101 GTTAGACAACTGTATTCATAAATGAAATGAACCTTTTCTTGAATTATTCT 2150
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   2151          .         .         .         .         . 2200
hh11563            2151 CATCTAATTTTGGAAACAGTATTATACTGGACATATCAGATGAACTGGGC 2200
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   2201          .         .         .         .         . 2250
hh11563            2201 AGCTTTTGCTGTTGTTCTGTATTCTGAAAAAAAAATAGGAATTGAGTGTG 2250
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   2251          .         .         .         .         . 2300
hh11563            2251 TTCCTTGAAAAATTGGTAGAACCCACATGGACTTTTGTTTTTGTCTGGAT 2300
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   2301          .         .         .         .         . 2350
hh11563            2301 GTTTCGTTTATGTGTGAGTCATTCACCATTACGTTTGTATTGTATTTTCA 2350
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   2351          .         .         .         .         . 2400
hh11563            2351 TATTTAGAAATAGATCCACATCCATTTCTGTTTTTAAAAGTATTATATTG 2400
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   2401          .         .         .         .         . 2450
hh11563            2401 ATGTAAAGTGTTTAAAAATTATCTGTAGATAATTCCTCTATAATTTGCCT 2450
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   2451          .         .         .         .         . 2500
hh11563            2451 TTTTGCACTTAATAAAATACCCATGGTATTTTATTAATGACCATCTCGTT 2500
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   2501          .         .         .         .         . 2550
hh11563            2501 GGTCAAAAGATATGGATCTAGGCCCAGGGCAGTGACTCACACCTGTAATC 2550
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   2551          .         .         .         .         . 2600
hh11563            2551 CCAGCACTTTGGGAAGCAAAAGCAGGAGGATTGCTTGAGCCCAGGAGTTC 2600
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   2601          .         .         .         .         . 2650
hh11563            2601 ATGGCCAGCCCAGGCAACATAGGAAGACCCCATCTCTACAAAAAAATTAA 2650
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   2651          .         .         .         .         . 2700
hh11563            2651 AAATTAGCCGGGAATGGTGGCGCATGCCTGTAGTCTCAGCTCCTTGGGAG 2700
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   2701          .         .         .         .         . 2750
hh11563            2701 GCTGAGGTGGGAGGATTGGTTGAAGCTGAGAGGCTGAGGCTGCAGTGAGC 2750
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   2751          .         .         .         .         . 2800
hh11563            2751 CATGATTGTATCACTGCACTCCAGCCTGGGTGACAGAGCAAGACACTGTC 2800
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   2801          .         .         .         .         . 2850
hh11563            2801 TCAAAAATATGTACATATATGGATCTACCACCTTATTTTTAAGTAACTCC 2850
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   2851          .         .         .         .         . 2900
hh11563            2851 ATGGTATTTCAGAAGTGTTTTTGACATACCATGCTGTCTTTCATAACAGA 2900
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   2901          .         .         .         .         . 2950
hh11563            2901 ATAGTGAAAAGACATAAGGTAAATTCTGAGTATATGCTAAATTGGGACCA 2950
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   2951          .         .         .         .         . 3000
hh11563            2951 TCATCGTATAAACTCTATTGCCTTTTGAGCAGTCCCCATTAATTGTAGTA 3000
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   3001          .         .         .         .         . 3050
hh11563            3001 GAACTTTAGAAAACTACTAAACAGTAGTTTGTGGAGTTTTGAGTCTTGAG 3050
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   3051          .         .         .         .         . 3100
hh11563            3051 TTTTAGGGCCAAATGTTTGGCGTTTACCATTCCATGAAGAAAAAAGCACC 3100
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   3101          .         .         .         .         . 3150
hh11563            3101 TTCGGCCAGGAGCGGTGGCTCATGCCTATAATCCCAGCAGTTTGGGAAGC 3150
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   3151          .         .         .         .         . 3200
hh11563            3151 TGGGGCAGGCGGATCGGATCACTTGAGGTTAGGAGTTCGAGAGCAGCCTG 3200
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   3201          .         .         .         .         . 3250
hh11563            3201 TCCAATGTGGTGAAACCCCATCTCTACTAAAAGTATAAAAATTAGCTGGG 3250
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   3251          .         .         .         .         . 3300
hh11563            3251 CATGGTAGCAGGCACCTGTAATCCCAGCTACTCGGGAGGCTGAGGCACGA 3300
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   3301          .         .         .         .         . 3350
hh11563            3301 GAATCGCTTGAACCCAGGAGGCAGAGGTTGCAGTCAACCGAGATCGTGCC 3350
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   3351          .         .         .         .         . 3400
hh11563            3351 ACTGCACTCCAGCCTGAGCGATAGAGCCAGACTCAGTCTCAAAAAATAAA 3400
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   3401          .         .         .         .         . 3450
hh11563            3401 TTAAAAGAAAAAAAGAAATAAGCACCTTTGATGCTCAAGGAGAGTTTAGT 3450
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   3451          .         .         .         .         . 3500
hh11563            3451 GCTTCTCAGGATCTATTTTCCCCTTTGCCTTTCAGACATACTCAGTATTT 3500
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   3501          .         .         .         .         . 3550
hh11563            3501 TCAGGATAAACACCAGGGCAACTAGTTACCACACTCTGCAGCTGCCTGCT 3550
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   3551          .         .         .         .         . 3600
hh11563            3551 CCTTGATCTTTTAGGCATCACGCTCCAAGGATGTTCTGGGTCGCTTCTTG 3600
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   3601          .         .         .         .         . 3650
hh11563            3601 CTGAGAATCCTAACACTACTGAGGCAGCCTTGACTCAGCACACCTGTGTC 3650
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   3651          .         .         .         .         . 3700
hh11563            3651 CTAATTTTACCACTGTAGTTCACTGGCTGTAGAGGAGGCCAAGGAAGTGC 3700
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   3701          .         .         .         .         . 3750
hh11563            3701 TAAGGACAGGGAGTCACTAGCAACCTTACAAGACGTTGGCTGGGTCACAA 3750
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   3751          .         .         .         .         . 3800
hh11563            3751 ACATTGCTAGCTTCAGTCCATGTTACTTGAGGAGGTAGACCAGGTGGGTC 3800
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   3801          .         .         .         .         . 3850
hh11563            3801 CCAACCTGCAAACTCTAGAAAGGCCTAGGACTTCATTTTCTATTTGGAAA 3850
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   3851          .         .         .         .         . 3900
hh11563            3851 CATCACTTGATATCTCTGGGCTTGGATGACCCATCTGTAAAATGGGGAGA 3900
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   3901          .         .         .         .         . 3950
hh11563            3901 ATTCTTGCTTGACTCGTCCTATAATAAGATACTGTGCTCATGAAAAAAAA 3950
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   3951          .         .         .         .         . 4000
hh11563            3951 AGGACAGGTATGAGTACTCTGAAAAGGTCTTGTTGGTTTTTAATTATTCT 4000
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   4001          .         .         .         .         . 4050
hh11563            4001 GCAAACACAGAATTTTTGTGTCTTCTGTCACAGATGGGTCCAGAGAAGTG 4050
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   4051          .         .         .         .         . 4100
hh11563            4051 ACTTTCTTATGTCACACAAAGCTGGTGACTAAAAATAGAACTCACCAGTT 4100
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   4101          .         .         .         .         . 4150
hh11563            4101 AGTGCCAAATAAGTACAAGGCACTTGAGAAAACTCAAACAGGAGTCGGGA 4150
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   4151          .         .         .         .         . 4200
hh11563            4151 GCCACTTCTTTTCTCTAAAACTTACATTATCATAAAGGACCAGGCTAGAG 4200
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   4201          .         .         .         .         . 4250
hh11563            4201 AGTTGAGGGGGCATCCCCGGGTGGGGCATGCACTGCCTGCACCTGATCCA 4250
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   4251          .         .         .         .         . 4300
hh11563            4251 GATTCAAGGGTGGTCGAGTCTGACTGTGCCGGTGCATCTTCCACCCATGA 4300
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   4301          .         .         .         .         . 4350
hh11563            4301 GAGGCTGCAAAAGGCTGGGTTCCTGATCCCTGGGGTGGGCACCAGTGAGT 4350
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   4351          .         .         .         .         . 4400
hh11563            4351 ACTGTGGGCTCCAAGGAGGGGTGGAGTGCTGTAGGTTTTGATCACCAAGG 4400
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   4401          .         .         .         .         . 4450
hh11563            4401 CAGACATGGAGAGGAGAGGGAAATTTCTGGAGGAAGGTGAGGAAAGGCAC 4450
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   4451          .         .         .         .         . 4500
hh11563            4451 CAAGAGGAGAAATCTCCAAGTGGATTAAGAAAGAAGTGGGCCGGTCTGAG 4500
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   4501          .         .         .         .         . 4550
hh11563            4501 CAGAGTTCAGGCAGAGATGTCCTCAGAGGGGCAAAGACTGAGAACCTTAG 4550
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   4551          .         .         .         .         . 4600
hh11563            4551 GAGTGGAGACCCTTTGGTACAGCTGGTAGAAACCCAACCTTTAAGTAGCC 4600
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   4601          .         .         .         .         . 4650
hh11563            4601 TAATGGAAAAAGGGGTGTGTATCGCTCATATAATTAGAGAATCGTGAGTA 4650
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   4651          .         .         .         .         . 4700
hh11563            4651 TTCCAGCATCAGGCATGGCTGGATCCAGGTGTTCCCACATCGGCTCTGTG 4700
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   4701          .         .         .         .         . 4750
hh11563            4701 TACTGGTTTCCTTCTTTCCTGCTGGGTCCGGCTGTACCAGCAGTTTCGCA 4750
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   4751          .         .         .         .         . 4800
hh11563            4751 TCATAACCAACAGGAAGCGATTTCCCCTGCGGTCCTCTGTATAAAATCCA 4800
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   4801          .         .         .         .         . 4850
hh11563            4801 AAGAGGACTCTTTTTAGCCCCTTTTAAGTCTGGACTCATTCCTGAAGCAA 4850
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   4851          .         .         .         .         . 4900
hh11563            4851 ACAGCAAGGCCAGTCTGGGTTACGCGTCTACCCCGTTGGGGGAGGGGAGC 4900
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   4901          .         .         .         .         . 4950
hh11563            4901 GGACCAGGGGACGCAATGAGGGGACTTTTCCCAAAAGAAGGAATTTGGGC 4950
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   4951          .         .         .         .         . 5000
hh11563            4951 CAATAATGCAATGTTTTGGTGAGGGTGAAGCAGTGCTGTACCTCCATCCA 5000
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   5001          .         .         .         .         . 5050
hh11563            5001 GGTAGGTTAGGGGCGCCAGGCAGCAGCTAACGACTTTCTCTCTCTGTCCC 5050
                                                                          
hh11563(revised)   1417 -------------------------------------------------- 1417

                   5051          .         .         .         .         . 5100
hh11563            5051 TGGAGCAGAGGGGATCGTGATCAAGACAGAGGAACAAGACGAGGAGGAAG 5100
                                ||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)   1417 --------AGGGGATCGTGATCAAGACAGAGGAACAAGACGAGGAGGAAG 1458

                   5101          .         .         .         .         . 5150
hh11563            5101 AAGAGGAGGAGGAGGATGAGCTGCCGCAGCACTTGCAATCCCTTGGGCAG 5150
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)   1459 AAGAGGAGGAGGAGGATGAGCTGCCGCAGCACTTGCAATCCCTTGGGCAG 1508

                   5151          .         .         .         .         . 5200
hh11563            5151 CTGTCCGGGAGATATGAGGCCAGTATGTACCAGACCCCGCTGCCCGGGGA 5200
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)   1509 CTGTCCGGGAGATATGAGGCCAGTATGTACCAGACCCCGCTGCCCGGGGA 1558

                   5201          .         .         .         .         . 5250
hh11563            5201 GATGTCCCCCGAGGGCGAGGAGAGCCCCCCGCCCCTGCAGCTAGGAAACC 5250
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)   1559 GATGTCCCCCGAGGGCGAGGAGAGCCCCCCGCCCCTGCAGCTAGGAAACC 1608

                   5251          .         .         .         .         . 5300
hh11563            5251 CCGCAGTGAAAAGGCTGGCGCCCTCCGTGCACGGTGAGCGGCACCTGAGC 5300
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)   1609 CCGCAGTGAAAAGGCTGGCGCCCTCCGTGCACGGTGAGCGGCACCTGAGC 1658

                   5301          .         .         .         .         . 5350
hh11563            5301 GAGAACCGCGGGGCCTCGAGCCAGCAGCAGCGGAACCGGCGCGGCGAGCG 5350
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)   1659 GAGAACCGCGGGGCCTCGAGCCAGCAGCAGCGGAACCGGCGCGGCGAGCG 1708

                   5351          .         .         .         .         . 5400
hh11563            5351 GCCCTTCACATGCATGGAGTGCGGCAAGAGCTTCCGCCTGAAGATCAACC 5400
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)   1709 GCCCTTCACATGCATGGAGTGCGGCAAGAGCTTCCGCCTGAAGATCAACC 1758

                   5401          .         .         .         .         . 5450
hh11563            5401 TCATCATCCACCAGCGCAACCACATCAAGGAGGGGCCCTACGAGTGCGCC 5450
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)   1759 TCATCATCCACCAGCGCAACCACATCAAGGAGGGGCCCTACGAGTGCGCC 1808

                   5451          .         .         .         .         . 5500
hh11563            5451 GAATGCGAGATCAGCTTCCGGCACAAGCAACAGCTCACGCTGCACCAGCG 5500
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)   1809 GAATGCGAGATCAGCTTCCGGCACAAGCAACAGCTCACGCTGCACCAGCG 1858

                   5501          .         .         .         .         . 5550
hh11563            5501 CATCCACCGCGTGCGCGGAGGCTGCGTCTCACCCGAACGCGGGCCCACGT 5550
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)   1859 CATCCACCGCGTGCGCGGAGGCTGCGTCTCACCCGAACGCGGGCCCACGT 1908

                   5551          .         .         .         .         . 5600
hh11563            5551 TCAACCCCAAGCACGCGCTCAAGCCGCGTCCCAAGTCACCCAGCTCTGGT 5600
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)   1909 TCAACCCCAAGCACGCGCTCAAGCCGCGTCCCAAGTCACCCAGCTCTGGT 1958

                   5601          .         .         .         .         . 5650
hh11563            5601 AGCGGCGGCGGTGGCCCTAAGCCCTACAAGTGCCCCGAGTGCGACAGCAG 5650
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)   1959 AGCGGCGGCGGTGGCCCTAAGCCCTACAAGTGCCCCGAGTGCGACAGCAG 2008

                   5651          .         .         .         .         . 5700
hh11563            5651 CTTCAGCCACAAGTCCAGCCTGACCAAACACCAGATCACGCACACGGGTG 5700
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)   2009 CTTCAGCCACAAGTCCAGCCTGACCAAACACCAGATCACGCACACGGGTG 2058

                   5701          .         .         .         .         . 5750
hh11563            5701 AGCGGCCCTACACGTGCCCCGAGTGCAAGAAGAGCTTCCGCCTGCACATC 5750
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)   2059 AGCGGCCCTACACGTGCCCCGAGTGCAAGAAGAGCTTCCGCCTGCACATC 2108

                   5751          .         .         .         .         . 5800
hh11563            5751 AGCTTGGTGATCCATCAGCGCGTGCACGCGGGCAAGCATGAGGTCTCCTT 5800
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)   2109 AGCTTGGTGATCCATCAGCGCGTGCACGCGGGCAAGCATGAGGTCTCCTT 2158

                   5801          .         .         .         .         . 5850
hh11563            5801 CATCTGCAGCCTGTGCGGCAAGAGCTTCAGCCGCCCCTCGCACCTGCTGC 5850
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)   2159 CATCTGCAGCCTGTGCGGCAAGAGCTTCAGCCGCCCCTCGCACCTGCTGC 2208

                   5851          .         .         .         .         . 5900
hh11563            5851 GCCACCAGCGGACTCACACAGGCGAGCGGCCCTTCAAGTGCCCCGAGTGC 5900
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)   2209 GCCACCAGCGGACTCACACAGGCGAGCGGCCCTTCAAGTGCCCCGAGTGC 2258

                   5901          .         .         .         .         . 5950
hh11563            5901 GAGAAGAGCTTCAGCGAGAAGTCCAAGCTCACCAACCACTGCCGCGTGCA 5950
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)   2259 GAGAAGAGCTTCAGCGAGAAGTCCAAGCTCACCAACCACTGCCGCGTGCA 2308

                   5951          .         .         .         .         . 6000
hh11563            5951 CTCGCGCGAGCGGCCGCCACCGCGGTGGAGCTCCAGCTTTTGTTCCCTTT 6000
                        ||||||||||||||||||||||||||||||||||||||||||||||||||
hh11563(revised)   2309 CTCGCGCGAGCGGCCGCCACCGCGGTGGAGCTCCAGCTTTTGTTCCCTTT 2358

                   6001          .       6016
hh11563            6001 AGTGAGGGTTAATTGC 6016
                        ||||||||||||||||
hh11563(revised)   2359 AGTGAGGGTTAATTGC 2374