Cloned DNA sequence, length = 3439 bp
Revised DNA sequence, length = 1323 bp
<< Positions of primers used in RT-PCR experiment(s) >>
1 : f NN10185 508 - 528 GTC ACG CTG GAC CAC ATC ATT
r NN10186 2928 - 2908 AGA GGT GGT GGT TTG GAA GTC
<< Positions of inserion/deletion/mutation(s) in the aligned sequence >>
Predicted coding region: colored in green ( 1 - 1320 in the revised sequence).1 : 603 - 2718 2116-bp deletion (in the revised sequence)
*- Clone Name -* 1 . . . . . 50
fk03135 1 GGAGAAGCTAGGAAGAAAATGGCGGCCGTGGCTGCAGAGGCGGCAGCGAC 50
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03135(revised) 1 GGAGAAGCTAGGAAGAAAATGGCGGCCGTGGCTGCAGAGGCGGCAGCGAC 50
51 . . . . . 100
fk03135 51 TGCAGCGTCCCCCGGGGAGGGGGGCGCCGGCGAGGCCGAGCCGGAGATGG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03135(revised) 51 TGCAGCGTCCCCCGGGGAGGGGGGCGCCGGCGAGGCCGAGCCGGAGATGG 100
101 . . . . . 150
fk03135 101 AGCCCATCCCCGGCAGTGAGGCCGGCACTGACCCCCTCCCGGTCACGGCC 150
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03135(revised) 101 AGCCCATCCCCGGCAGTGAGGCCGGCACTGACCCCCTCCCGGTCACGGCC 150
151 . . . . . 200
fk03135 151 ACTGAAGCGTCTGTGCCGGATGGCGAGACTGACGGGCAGCAATCCGCTCC 200
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03135(revised) 151 ACTGAAGCGTCTGTGCCGGATGGCGAGACTGACGGGCAGCAATCCGCTCC 200
201 . . . . . 250
fk03135 201 TCAGGCCGACGAGCCGCCGCTCCCGCCGCCACCGCCGCCGCCGGGGGAGC 250
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03135(revised) 201 TCAGGCCGACGAGCCGCCGCTCCCGCCGCCACCGCCGCCGCCGGGGGAGC 250
251 . . . . . 300
fk03135 251 TCGCCCGCAGCCCAGAGGCGGTGGGGCCGGAGCTGGAGGCTGAGGAGAAA 300
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03135(revised) 251 TCGCCCGCAGCCCAGAGGCGGTGGGGCCGGAGCTGGAGGCTGAGGAGAAA 300
301 . . . . . 350
fk03135 301 CTGTCCGTTCGGGTGGCGGAGTCGGCGGCAGCCGCGCCTCAGGGAGGGCC 350
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03135(revised) 301 CTGTCCGTTCGGGTGGCGGAGTCGGCGGCAGCCGCGCCTCAGGGAGGGCC 350
351 . . . . . 400
fk03135 351 GGAACTTCCACCTTCTCCTGCATCGCCGCCGGAGCAGCCCCCGGCTCCCG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03135(revised) 351 GGAACTTCCACCTTCTCCTGCATCGCCGCCGGAGCAGCCCCCGGCTCCCG 400
401 . . . . . 450
fk03135 401 AGGAGCGCGAGGAGCCGCCGCTGCCTCAGCCCGTAGCCCCGGCGCTCGTG 450
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03135(revised) 401 AGGAGCGCGAGGAGCCGCCGCTGCCTCAGCCCGTAGCCCCGGCGCTCGTG 450
451 . . . . . 500
fk03135 451 CCGCCGGCGGGCGGGGACTCCACGGTGTCGCAACTGATCCCGGGCTCGGA 500
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03135(revised) 451 CCGCCGGCGGGCGGGGACTCCACGGTGTCGCAACTGATCCCGGGCTCGGA 500
501 . . . . . 550
fk03135 501 GGTGCGGGTCACGCTGGACCACATCATTGAGGACGCGCTTGTCGTGTCGT 550
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03135(revised) 501 GGTGCGGGTCACGCTGGACCACATCATTGAGGACGCGCTTGTCGTGTCGT 550
551 . . . . . 600
fk03135 551 TCCGCTTCGGGGAGAAGCTCTTCTCCGGGGTCCTCATGGATCTGTCCAAA 600
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03135(revised) 551 TCCGCTTCGGGGAGAAGCTCTTCTCCGGGGTCCTCATGGATCTGTCCAAA 600
601 . . . . . 650
fk03135 601 AGGTACCGCGCCCGCCCCCAGCACCCTCCGGTCCGCTGGGTCCCCAGGGA 650
||
fk03135(revised) 601 AG------------------------------------------------ 602
651 . . . . . 700
fk03135 651 GGGAGTGAGCCCGGGCGGCCCCCTCTCCCCGAGCCCTCGCTTCCCCGCTG 700
fk03135(revised) 603 -------------------------------------------------- 603
701 . . . . . 750
fk03135 701 CCCGGGGCCCCGCCCTCTGGTCCTGCGCGGCGCGTGGCGCGCGCTCCGAG 750
fk03135(revised) 603 -------------------------------------------------- 603
751 . . . . . 800
fk03135 751 TGGGGCAGGCGCGCGAGACCGGGAGAGGGCGGTCCCGGCCCCAGGTGGGC 800
fk03135(revised) 603 -------------------------------------------------- 603
801 . . . . . 850
fk03135 801 GCCTGCGGGGCAGGTGTGCCACCAGGTGGGAGGGTGCAGGTGCAGATGGG 850
fk03135(revised) 603 -------------------------------------------------- 603
851 . . . . . 900
fk03135 851 CTCACAGGTCTCACCCCTCACGCCTGGTCTTCTTCTGCGACTTGGCCTGG 900
fk03135(revised) 603 -------------------------------------------------- 603
901 . . . . . 950
fk03135 901 AGTCACCGTCACTGGGCGGGTGGGTTAATGCAAGATGCAGATGGATTTTT 950
fk03135(revised) 603 -------------------------------------------------- 603
951 . . . . . 1000
fk03135 951 GCAGAGAACGGAGTGTTGGACGGGGGGACGGGGGGGCGGGGGGCATTGCT 1000
fk03135(revised) 603 -------------------------------------------------- 603
1001 . . . . . 1050
fk03135 1001 TGCGAGGAGGCACTTGTCTGTCCTCTAACGTTTAACTTTAGCGGGATTGG 1050
fk03135(revised) 603 -------------------------------------------------- 603
1051 . . . . . 1100
fk03135 1051 AGAAAGGGGTGTGTACATTGGGGTTCCCAAAAGGTTACCTGTCACTCCTT 1100
fk03135(revised) 603 -------------------------------------------------- 603
1101 . . . . . 1150
fk03135 1101 ACAGGGGGAAGAGCATTTGTTAAAATGAACCTTTTAACTGTAATTCTTAC 1150
fk03135(revised) 603 -------------------------------------------------- 603
1151 . . . . . 1200
fk03135 1151 GGTTAGAAGTCATTCCCGTTAGGTTAACCATTCAACAGAGAAGCATATTT 1200
fk03135(revised) 603 -------------------------------------------------- 603
1201 . . . . . 1250
fk03135 1201 TGCTAATTTTAATGATAGTTTAAGAAAAGTTTAAAGAAGAGATTGGAGAT 1250
fk03135(revised) 603 -------------------------------------------------- 603
1251 . . . . . 1300
fk03135 1251 TTTTAAAAAATCCTTTAATGTCAAGGTGGTGTAGCATAAAAATGTTCAAG 1300
fk03135(revised) 603 -------------------------------------------------- 603
1301 . . . . . 1350
fk03135 1301 TAACTTCTAACACCTGGGATTCAGTTTATGTATTAAGGACAAGAAGGTTG 1350
fk03135(revised) 603 -------------------------------------------------- 603
1351 . . . . . 1400
fk03135 1351 AGTTCATCTACAAATTTGGCTTAACCACATTTTCATTTTTTGATTTAAAA 1400
fk03135(revised) 603 -------------------------------------------------- 603
1401 . . . . . 1450
fk03135 1401 TGTTTTTGGGCTCTGCTTTCAACAGGGGAAGAGAACCTGTTCTAAGTCTG 1450
fk03135(revised) 603 -------------------------------------------------- 603
1451 . . . . . 1500
fk03135 1451 GAGTTAACCTTTTTATTCTCTTCTTTTGCAGATATGAAGTGCAGAGACTC 1500
fk03135(revised) 603 -------------------------------------------------- 603
1501 . . . . . 1550
fk03135 1501 CCATTCACGGCTTTCCATTCTGTTTCCTGCAACAGCACACGCTCTGATCG 1550
fk03135(revised) 603 -------------------------------------------------- 603
1551 . . . . . 1600
fk03135 1551 TATCTCACCTGTTTGCAATGGCTTATTAGTATGTTTTACTCTTAAACTTG 1600
fk03135(revised) 603 -------------------------------------------------- 603
1601 . . . . . 1650
fk03135 1601 CTTGCTCTCCCATCAAGACCCAGGAATCCTTCTTTCCCATTTGGGGAAAA 1650
fk03135(revised) 603 -------------------------------------------------- 603
1651 . . . . . 1700
fk03135 1651 AAGCCATTTAAAATTTCATATTGAAGTATGGTGTTTGAGGGGAAAGATGA 1700
fk03135(revised) 603 -------------------------------------------------- 603
1701 . . . . . 1750
fk03135 1701 GAGCAGTTATTCTGTATTATTTAATCTCAAATATCTTTTTTTTTTTTTTT 1750
fk03135(revised) 603 -------------------------------------------------- 603
1751 . . . . . 1800
fk03135 1751 GAGACGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCGCCATAT 1800
fk03135(revised) 603 -------------------------------------------------- 603
1801 . . . . . 1850
fk03135 1801 CGTCTCACTGCAACCTCCGCCTCCTGGGTTCAAGCGATTCTCCCGCCTCA 1850
fk03135(revised) 603 -------------------------------------------------- 603
1851 . . . . . 1900
fk03135 1851 GCCTCCCAAGTAGCTGGGACTACAGGCGTGCGCCACCATGCTGGTCTAAT 1900
fk03135(revised) 603 -------------------------------------------------- 603
1901 . . . . . 1950
fk03135 1901 TTTTGTATTTTTTAACTAGAGCCGGGATTTCACCATGTTGGCCAGGCTGG 1950
fk03135(revised) 603 -------------------------------------------------- 603
1951 . . . . . 2000
fk03135 1951 TCTTGAAATCCTGACCTCAGGTTATCCACCCGCCTCAGCCTCCCAAAGGG 2000
fk03135(revised) 603 -------------------------------------------------- 603
2001 . . . . . 2050
fk03135 2001 CTGGGATTACAGGCATGAGCCGCCGTGCCCGGCCTCAAGTATCTTTTTTA 2050
fk03135(revised) 603 -------------------------------------------------- 603
2051 . . . . . 2100
fk03135 2051 AAAATAATTTTGGATTAGGGCATTTGCACTTCTGTTTATGTTTGTTTGTT 2100
fk03135(revised) 603 -------------------------------------------------- 603
2101 . . . . . 2150
fk03135 2101 TACTTATTTATTAGAGACAGGGTCTTGCTGTGCTGCCTAGGCTGGTCTCA 2150
fk03135(revised) 603 -------------------------------------------------- 603
2151 . . . . . 2200
fk03135 2151 GACTCCTGGGCTCAAGCGATCCTACTGCCTTGGCCTTCCAAAGTGCTGAA 2200
fk03135(revised) 603 -------------------------------------------------- 603
2201 . . . . . 2250
fk03135 2201 ATTACAGGCGTGAGCCACTGTGCCCGGCCTGCACTCCTGTTTTCATAATT 2250
fk03135(revised) 603 -------------------------------------------------- 603
2251 . . . . . 2300
fk03135 2251 AGAAAGCAGAATAAGGTGAGTGTGCTTTCTATTGATGTATTTTATTTATT 2300
fk03135(revised) 603 -------------------------------------------------- 603
2301 . . . . . 2350
fk03135 2301 TATTTATTTATTTATTTTTGAGACAGAGTTTCGCTCTTGTTGTCCAGGCT 2350
fk03135(revised) 603 -------------------------------------------------- 603
2351 . . . . . 2400
fk03135 2351 GCAGTGGTACAATCTCTGCTCACTGCACCCTCCACCTCCCTGGTTCAAGT 2400
fk03135(revised) 603 -------------------------------------------------- 603
2401 . . . . . 2450
fk03135 2401 GATTCTCCTACCTCAGCCTCCCAAGTAGCTGGGATTACAGGCATGTGCCA 2450
fk03135(revised) 603 -------------------------------------------------- 603
2451 . . . . . 2500
fk03135 2451 CCACGCCTGGCTAATTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGT 2500
fk03135(revised) 603 -------------------------------------------------- 603
2501 . . . . . 2550
fk03135 2501 TGGTCAGGTTGGTCTCAAACTCCTGACCTCAGGTGATCCACCCACCTTGG 2550
fk03135(revised) 603 -------------------------------------------------- 603
2551 . . . . . 2600
fk03135 2551 CCTCCCAAAGTGCTGAGATTACAGGCATGAGCCACCTCGCCCGGCCTCTA 2600
fk03135(revised) 603 -------------------------------------------------- 603
2601 . . . . . 2650
fk03135 2601 CTGATGTATATAATAGTAAGAGACACTCTGGTGTGTATGCTGTTGAATGA 2650
fk03135(revised) 603 -------------------------------------------------- 603
2651 . . . . . 2700
fk03135 2651 AACAGAAGAGATGGCCAGTGATTGTGTGAGAATCTGGATTTCAAATCTGC 2700
fk03135(revised) 603 -------------------------------------------------- 603
2701 . . . . . 2750
fk03135 2701 AAAAGGAAGGTGCAGAAGGTTTGGGCCCCATGGTATCCCTGTGACAGTAT 2750
||||||||||||||||||||||||||||||||
fk03135(revised) 603 ------------------GTTTGGGCCCCATGGTATCCCTGTGACAGTAT 634
2751 . . . . . 2800
fk03135 2751 TTCCCAAAAGGGAATATAAGGATAAACCAGAAGCCATGCCGCTCCAAAGT 2800
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03135(revised) 635 TTCCCAAAAGGGAATATAAGGATAAACCAGAAGCCATGCCGCTCCAAAGT 684
2801 . . . . . 2850
fk03135 2801 AATACATTCCAAGAAGGGACAGAAGTCAAGTGTGAAGCAAATGGTGCTGT 2850
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03135(revised) 685 AATACATTCCAAGAAGGGACAGAAGTCAAGTGTGAAGCAAATGGTGCTGT 734
2851 . . . . . 2900
fk03135 2851 TCCCGATGACCCTTCTCCTGTCCCGCATCCCGAGCTGAGCTTGGCTGAAA 2900
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03135(revised) 735 TCCCGATGACCCTTCTCCTGTCCCGCATCCCGAGCTGAGCTTGGCTGAAA 784
2901 . . . . . 2950
fk03135 2901 GCCTGTGGACTTCCAAACCACCACCTCTCTTCCATGAAGGAGCACCTTAT 2950
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03135(revised) 785 GCCTGTGGACTTCCAAACCACCACCTCTCTTCCATGAAGGAGCACCTTAT 834
2951 . . . . . 3000
fk03135 2951 CCTCCCCCTTTGTTTATCAGGGACACATATAACCAATCAATACCTCAGCC 3000
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03135(revised) 835 CCTCCCCCTTTGTTTATCAGGGACACATATAACCAATCAATACCTCAGCC 884
3001 . . . . . 3050
fk03135 3001 ACCTCCTCGGAAAATTAAGCGACCCAAACGAAAAATGTACAGGGAAGAAC 3050
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03135(revised) 885 ACCTCCTCGGAAAATTAAGCGACCCAAACGAAAAATGTACAGGGAAGAAC 934
3051 . . . . . 3100
fk03135 3051 CCACTTCAATAATGAATGCTATTAAACTACGACCCAGGCAAGTTCTGTGT 3100
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03135(revised) 935 CCACTTCAATAATGAATGCTATTAAACTACGACCCAGGCAAGTTCTGTGT 984
3101 . . . . . 3150
fk03135 3101 GATAAATGTAAAAACAGTGTTGTTGCTGAAAAAAAGGAAATTAGAAAAGG 3150
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03135(revised) 985 GATAAATGTAAAAACAGTGTTGTTGCTGAAAAAAAGGAAATTAGAAAAGG 1034
3151 . . . . . 3200
fk03135 3151 TAGTAGTGCAACTGACTCTTCTAAATATGAAGATAAAAAACGGAGAAATG 3200
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03135(revised) 1035 TAGTAGTGCAACTGACTCTTCTAAATATGAAGATAAAAAACGGAGAAATG 1084
3201 . . . . . 3250
fk03135 3201 AAAGTGTAACTACTGTGAACAAAAAACTGAAAACTGACCATAAAGTGGAT 3250
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03135(revised) 1085 AAAGTGTAACTACTGTGAACAAAAAACTGAAAACTGACCATAAAGTGGAT 1134
3251 . . . . . 3300
fk03135 3251 GGGAAAAACCAAAATGAAAGCCAGAAAAGAAATGCTGTGGTTAAGGTTTC 3300
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03135(revised) 1135 GGGAAAAACCAAAATGAAAGCCAGAAAAGAAATGCTGTGGTTAAGGTTTC 1184
3301 . . . . . 3350
fk03135 3301 AAATATTGCTCACAGCAGAGGCAGAGTAGTAAAAGTTTCTGCTCAGGCAA 3350
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03135(revised) 1185 AAATATTGCTCACAGCAGAGGCAGAGTAGTAAAAGTTTCTGCTCAGGCAA 1234
3351 . . . . . 3400
fk03135 3351 ATACATCAAAAGCTCAGTTAAGTACTAAAAAAGTTCTCCAGAGTAAGAAC 3400
||||||||||||||||||||||||||||||||||||||||||||||||||
fk03135(revised) 1235 ATACATCAAAAGCTCAGTTAAGTACTAAAAAAGTTCTCCAGAGTAAGAAC 1284
3401 . . . 3439
fk03135 3401 ATGGATCATGCGAAAGCTCGGGAAGTGTTAAAAATTGCC 3439
|||||||||||||||||||||||||||||||||||||||
fk03135(revised) 1285 ATGGATCATGCGAAAGCTCGGGAAGTGTTAAAAATTGCC 1323