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Gene/Protein Characteristic Table for FLJ00383

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Product ID	ORK04218
Accession No	AK090462
Clone name	sj02824
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACGCGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (4513 bp) Predicted protein sequence (380 aa)
Source	Human spleen
Rouge ID	mFLJ00383 by Kazusa Mouse cDNA Project

Length: 4513 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

Length: 380 aa
Result of homology search against nr database (FASTA output, Multiple alignment)

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
HMMPfam	IPR008388	2	380	PF05827	Vacuolar ATP synthase subunit S1

Prediction of transmembrane (TM) segments

Method	No.	N terminal	transmembrane region	C terminal	type	length
SOSUI2	1	35	DLAPSSLVLPAVDWYAVSTLTTY	57	SECONDARY	23
	2	336	IWMGLLTSLFMLFIFTYGLHMIL	358	PRIMARY	23

Experimental conditions

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