FLJ00182

Product ID	ORK07359
Accession No	AK074111
Clone name	sj01566
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACGCGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (4429 bp) Predicted protein sequence (938 aa)
Source	Human spleen
Rouge ID	mFLJ00182 by Kazusa Mouse cDNA Project

	N-terminal truncation	Coding interruption
cloned DNA seq	Warning	Warning

Length: 938 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	ID%	Protein	Source
BAB84937	100.0	FLJ00182 protei...	Homo sapiens
XP_523527	98.5	hypothetical pr...	Pan troglodytes
XP_001117349	96.8	similar to alph...	Macaca mulatta
XP_001502383	91.9	similar to mCG1...	Equus caballus
EDL12812	88.3	mCG132656 [Mus ...	Mus musculus

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)

No significant homologues

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
HMMPfam	IPR001680	766	803	PF00400	G-protein beta WD-40 repeat
HMMSmart	IPR001680	764	803	SM00320	G-protein beta WD-40 repeat
	IPR001680	813	850	SM00320	G-protein beta WD-40 repeat
	IPR001680	853	895	SM00320	G-protein beta WD-40 repeat
ProfileScan	NULL	277	344	PS50313	NULL
	IPR001680	771	802	PS50082	G-protein beta WD-40 repeat
	IPR001680	771	859	PS50294	G-protein beta WD-40 repeat

Primer_f
Primer_r
PCR conditions	test