Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005349A_C01 KMC005349A_c01
(596 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC17529.1| aquaporin 2 [Samanea saman] 261 4e-69
gb|AAO39007.1| plasma intrinsic protein 2,1 [Juglans regia] 248 3e-65
gb|AAO39008.1| plasma intrinsic protein 2,2 [Juglans regia] 248 3e-65
pir||T06434 plasma membrane intrinsic protein 1 - soybean gi|886... 248 5e-65
dbj|BAB40143.1| plasma membrane intrinsic protein 2-2 [Pyrus com... 243 1e-63
>gb|AAC17529.1| aquaporin 2 [Samanea saman]
Length = 287
Score = 261 bits (668), Expect = 4e-69
Identities = 138/170 (81%), Positives = 148/170 (86%), Gaps = 1/170 (0%)
Frame = +1
Query: 88 MAKDVEVAERGSFSSKDYHDPPPAPLIDAEELTKWSFYRAVIAEFIATLLFLYITVLTVI 267
MAKDVEVAERGS+S+KDYHDPPPAPLIDAEEL KWSFYRA+IAEFIATLLFLYITVLTVI
Sbjct: 1 MAKDVEVAERGSYSAKDYHDPPPAPLIDAEELGKWSFYRALIAEFIATLLFLYITVLTVI 60
Query: 268 GYKVQSDVKNGGDDCGGVGILGY-WLGPVGGMIFILVLTGTGLGSRGGHH*PQHVTFGLF 444
GYK QSD K GGD CGGVGILG W GGMIFILV G+ GGH P VTFGLF
Sbjct: 61 GYKSQSDTKAGGDVCGGVGILGIAW--AFGGMIFILVYCTAGIS--GGHINPA-VTFGLF 115
Query: 445 LARKVSLIRAILYMVAQCLGAICGVGLVKAFQKSHYNKYGGGANSLNDGY 594
LARKVSLIRAILYMVAQCLGAICGVGLVKAFQK++Y++YGGGAN+L+DGY
Sbjct: 116 LARKVSLIRAILYMVAQCLGAICGVGLVKAFQKAYYSRYGGGANTLSDGY 165
>gb|AAO39007.1| plasma intrinsic protein 2,1 [Juglans regia]
Length = 287
Score = 248 bits (634), Expect = 3e-65
Identities = 126/170 (74%), Positives = 140/170 (82%), Gaps = 1/170 (0%)
Frame = +1
Query: 88 MAKDVEVAERGSFSSKDYHDPPPAPLIDAEELTKWSFYRAVIAEFIATLLFLYITVLTVI 267
MAKD+E A +G FS+KDYHDPPPAPLIDAEE T+WSFYRA+IAEFIATLLFLYITVLTVI
Sbjct: 1 MAKDIEAAGQGGFSAKDYHDPPPAPLIDAEEFTQWSFYRAIIAEFIATLLFLYITVLTVI 60
Query: 268 GYKVQSDVKNGGDDCGGVGILGY-WLGPVGGMIFILVLTGTGLGSRGGHH*PQHVTFGLF 444
GYK Q+D GGDDCGGVGILG W GGMIF+LV G+ GGH P VTFGLF
Sbjct: 61 GYKSQTDKAKGGDDCGGVGILGIAW--AFGGMIFVLVYCTAGIS--GGHINPA-VTFGLF 115
Query: 445 LARKVSLIRAILYMVAQCLGAICGVGLVKAFQKSHYNKYGGGANSLNDGY 594
LARKVSL+RA+ YM AQCLGA+CG GLVKAFQK++Y+KYGGGAN L DGY
Sbjct: 116 LARKVSLVRAVFYMAAQCLGAVCGCGLVKAFQKAYYSKYGGGANELADGY 165
>gb|AAO39008.1| plasma intrinsic protein 2,2 [Juglans regia]
Length = 287
Score = 248 bits (634), Expect = 3e-65
Identities = 126/170 (74%), Positives = 140/170 (82%), Gaps = 1/170 (0%)
Frame = +1
Query: 88 MAKDVEVAERGSFSSKDYHDPPPAPLIDAEELTKWSFYRAVIAEFIATLLFLYITVLTVI 267
MAKD+E A +G FS+KDYHDPPPAPLIDAEE T+WSFYRA+IAEFIATLLFLYITVLTVI
Sbjct: 1 MAKDIEAAGQGGFSAKDYHDPPPAPLIDAEEFTQWSFYRAIIAEFIATLLFLYITVLTVI 60
Query: 268 GYKVQSDVKNGGDDCGGVGILGY-WLGPVGGMIFILVLTGTGLGSRGGHH*PQHVTFGLF 444
GYK Q+D GGDDCGGVGILG W GGMIF+LV G+ GGH P VTFGLF
Sbjct: 61 GYKSQTDKAKGGDDCGGVGILGIAW--AFGGMIFVLVYCTAGIS--GGHINPA-VTFGLF 115
Query: 445 LARKVSLIRAILYMVAQCLGAICGVGLVKAFQKSHYNKYGGGANSLNDGY 594
LARKVSL+RA+ YM AQCLGA+CG GLVKAFQK++Y+KYGGGAN L DGY
Sbjct: 116 LARKVSLVRAVFYMAAQCLGAVCGCGLVKAFQKAYYSKYGGGANELADGY 165
>pir||T06434 plasma membrane intrinsic protein 1 - soybean
gi|886100|gb|AAA69490.1| putative water channel protein;
plasmalemma intrinsic protein; similar to Arabidopsis
Pip2a gene product, PIR Accession Number S44084
Length = 285
Score = 248 bits (632), Expect = 5e-65
Identities = 130/162 (80%), Positives = 140/162 (86%), Gaps = 1/162 (0%)
Frame = +1
Query: 112 ERGSFSSKDYHDPPPAPLIDAEELTKWSFYRAVIAEFIATLLFLYITVLTVIGYKVQSDV 291
E GSFS+KDYHDPPPAPLIDAEELT+WSFYRA+IAEFIATLLFLYITVLTVIGYK QSDV
Sbjct: 7 EGGSFSAKDYHDPPPAPLIDAEELTQWSFYRALIAEFIATLLFLYITVLTVIGYKSQSDV 66
Query: 292 KNGGDDCGGVGILGY-WLGPVGGMIFILVLTGTGLGSRGGHH*PQHVTFGLFLARKVSLI 468
K GGD CGGVGILG W GGMIFILV G+ GGH P VTFGLFLARKVSLI
Sbjct: 67 KAGGDVCGGVGILGIAW--AFGGMIFILVYCTAGIS--GGHINPA-VTFGLFLARKVSLI 121
Query: 469 RAILYMVAQCLGAICGVGLVKAFQKSHYNKYGGGANSLNDGY 594
RAI+YMVAQCLGAICGVGLVKAFQK++YN+YGGGAN L++GY
Sbjct: 122 RAIMYMVAQCLGAICGVGLVKAFQKAYYNRYGGGANELSEGY 163
>dbj|BAB40143.1| plasma membrane intrinsic protein 2-2 [Pyrus communis]
Length = 287
Score = 243 bits (621), Expect = 1e-63
Identities = 129/170 (75%), Positives = 141/170 (82%), Gaps = 1/170 (0%)
Frame = +1
Query: 88 MAKDVEVAERGSFSSKDYHDPPPAPLIDAEELTKWSFYRAVIAEFIATLLFLYITVLTVI 267
MAKD+EVAERGSFS+KDYHDPPPAPLIDA ELTKWSFYRA+IAEF+ATLLFLY+TVLTVI
Sbjct: 1 MAKDMEVAERGSFSAKDYHDPPPAPLIDAAELTKWSFYRALIAEFVATLLFLYVTVLTVI 60
Query: 268 GYKVQSDVKNGGDDCGGVGILGY-WLGPVGGMIFILVLTGTGLGSRGGHH*PQHVTFGLF 444
GYK Q+D D CGGVGILG W GGMIF+LV G+ GGH P VTFGLF
Sbjct: 61 GYKSQTDPAVNADACGGVGILGIAW--AFGGMIFVLVYCTAGIS--GGHINPA-VTFGLF 115
Query: 445 LARKVSLIRAILYMVAQCLGAICGVGLVKAFQKSHYNKYGGGANSLNDGY 594
LARKVSL+RA+LYMVAQ LGAI GV LVKAFQKS+Y KYGGGANSL+DGY
Sbjct: 116 LARKVSLVRAVLYMVAQSLGAIAGVALVKAFQKSYYIKYGGGANSLSDGY 165
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 576,227,397
Number of Sequences: 1393205
Number of extensions: 14222352
Number of successful extensions: 71973
Number of sequences better than 10.0: 613
Number of HSP's better than 10.0 without gapping: 53762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 68150
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23140425222
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
