Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC005244A_C01 KMC005244A_c01
(504 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB40141.1| plasma membrane intrinsic protein 2-1 [Pyrus com... 259 2e-68
emb|CAB45651.1| putative plasma membrane intrinsic protein [Pisu... 254 4e-67
gb|AAK26763.1| plasma membrane integral protein ZmPIP2-7 [Zea mays] 249 1e-65
gb|AAC17529.1| aquaporin 2 [Samanea saman] 249 1e-65
gb|AAF71816.1|AF141642_1 putative aquaporin PIP2-1 [Vitis berlan... 249 2e-65
>dbj|BAB40141.1| plasma membrane intrinsic protein 2-1 [Pyrus communis]
Length = 281
Score = 259 bits (661), Expect = 2e-68
Identities = 123/154 (79%), Positives = 136/154 (87%)
Frame = +2
Query: 41 MAKDTEVQEQGEYSAKDYQDPPPTPLFEPEELRKWSFYRALIAEFIATLLFLYVTVLTVI 220
MAKD EV E GE++AKDY DPPPTPLF+ EEL KWSFYRALIAEFIATLLFLY+TVLTVI
Sbjct: 1 MAKDVEVAEHGEFAAKDYHDPPPTPLFDAEELTKWSFYRALIAEFIATLLFLYITVLTVI 60
Query: 221 GHSRLNSADPCDGAGILGMAWAFGGMIFILVYCTAGISGGHINPAVTFGLFIGRKVSLIR 400
G+ + AD C G GILG+AWAFGGMIF+LVYCTAGISGGHINPAVTFGLF+ RKVSLIR
Sbjct: 61 GYKSQSEADQCGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIR 120
Query: 401 ALLYIVAQCLGAISGVGLAKAFQKSFYNRYGGAA 502
A+LYI+AQCLGAI GVGL KAFQKS+Y +YGG A
Sbjct: 121 AVLYIIAQCLGAICGVGLVKAFQKSYYVKYGGGA 154
>emb|CAB45651.1| putative plasma membrane intrinsic protein [Pisum sativum]
Length = 285
Score = 254 bits (649), Expect = 4e-67
Identities = 121/158 (76%), Positives = 136/158 (85%), Gaps = 4/158 (2%)
Frame = +2
Query: 41 MAKDTEVQEQGEYSAKDYQDPPPTPLFEPEELRKWSFYRALIAEFIATLLFLYVTVLTVI 220
MAKD EVQEQGEYSAKDYQDPPP PL + +EL KWSFYRALIAEF+ATLLFLYVT+LT+I
Sbjct: 1 MAKDVEVQEQGEYSAKDYQDPPPAPLIDLDELTKWSFYRALIAEFVATLLFLYVTILTII 60
Query: 221 GHSRLNSADP----CDGAGILGMAWAFGGMIFILVYCTAGISGGHINPAVTFGLFIGRKV 388
G+S A+ CDG GILG+AWAFGGMIFILVYCTAGISGGHINPAVTFGLF+GRKV
Sbjct: 61 GYSHQTDANAGGTDCDGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFVGRKV 120
Query: 389 SLIRALLYIVAQCLGAISGVGLAKAFQKSFYNRYGGAA 502
SL+RA+ Y+ AQC GA+ G GLAK FQKSF++RYGG A
Sbjct: 121 SLLRAVFYMAAQCAGAVCGTGLAKGFQKSFFDRYGGGA 158
>gb|AAK26763.1| plasma membrane integral protein ZmPIP2-7 [Zea mays]
Length = 287
Score = 249 bits (637), Expect = 1e-65
Identities = 122/158 (77%), Positives = 133/158 (83%), Gaps = 6/158 (3%)
Frame = +2
Query: 41 MAKDTE-VQEQGEYSAKDYQDPPPTPLFEPEELRKWSFYRALIAEFIATLLFLYVTVLTV 217
MAKD E V EQGEYSAKDY DPPP PL +P+EL KWS YRA IAEFIATLLFLY+TVLT+
Sbjct: 1 MAKDVEQVTEQGEYSAKDYHDPPPAPLIDPDELTKWSLYRAAIAEFIATLLFLYITVLTI 60
Query: 218 IGHSRLNSAD-----PCDGAGILGMAWAFGGMIFILVYCTAGISGGHINPAVTFGLFIGR 382
IG+ R + CDG GILG+AWAFGGMIFILVYCTAGISGGHINPAVTFGLF+GR
Sbjct: 61 IGYKRQSDTKIPGNTECDGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGR 120
Query: 383 KVSLIRALLYIVAQCLGAISGVGLAKAFQKSFYNRYGG 496
KVSL+RALLY++AQC GAI G GLAK FQKSFYNRYGG
Sbjct: 121 KVSLVRALLYMIAQCAGAICGAGLAKGFQKSFYNRYGG 158
>gb|AAC17529.1| aquaporin 2 [Samanea saman]
Length = 287
Score = 249 bits (636), Expect = 1e-65
Identities = 122/158 (77%), Positives = 134/158 (84%), Gaps = 4/158 (2%)
Frame = +2
Query: 41 MAKDTEVQEQGEYSAKDYQDPPPTPLFEPEELRKWSFYRALIAEFIATLLFLYVTVLTVI 220
MAKD EV E+G YSAKDY DPPP PL + EEL KWSFYRALIAEFIATLLFLY+TVLTVI
Sbjct: 1 MAKDVEVAERGSYSAKDYHDPPPAPLIDAEELGKWSFYRALIAEFIATLLFLYITVLTVI 60
Query: 221 GHSRLNSA----DPCDGAGILGMAWAFGGMIFILVYCTAGISGGHINPAVTFGLFIGRKV 388
G+ + D C G GILG+AWAFGGMIFILVYCTAGISGGHINPAVTFGLF+ RKV
Sbjct: 61 GYKSQSDTKAGGDVCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKV 120
Query: 389 SLIRALLYIVAQCLGAISGVGLAKAFQKSFYNRYGGAA 502
SLIRA+LY+VAQCLGAI GVGL KAFQK++Y+RYGG A
Sbjct: 121 SLIRAILYMVAQCLGAICGVGLVKAFQKAYYSRYGGGA 158
>gb|AAF71816.1|AF141642_1 putative aquaporin PIP2-1 [Vitis berlandieri x Vitis rupestris]
Length = 284
Score = 249 bits (635), Expect = 2e-65
Identities = 120/155 (77%), Positives = 133/155 (85%), Gaps = 1/155 (0%)
Frame = +2
Query: 41 MAKDTEVQEQGEYSAKDYQDPPPTPLFEPEELRKWSFYRALIAEFIATLLFLYVTVLTVI 220
M KD EV E G +SAKDY DPPP PLF+ EL KWSFYRALIAEFIATLLFLY+TVLTVI
Sbjct: 1 MTKDVEVAEHGSFSAKDYHDPPPAPLFDSVELTKWSFYRALIAEFIATLLFLYITVLTVI 60
Query: 221 GH-SRLNSADPCDGAGILGMAWAFGGMIFILVYCTAGISGGHINPAVTFGLFIGRKVSLI 397
G+ S+ DPC G GILG+AW+FGGMIFILVYCTAGISGGHINPAVTFGLF+ RKVSLI
Sbjct: 61 GYKSQTAGGDPCGGVGILGIAWSFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLI 120
Query: 398 RALLYIVAQCLGAISGVGLAKAFQKSFYNRYGGAA 502
RA+LY+VAQCLGAI GVGL KAFQ ++Y+RYGG A
Sbjct: 121 RAILYMVAQCLGAICGVGLVKAFQSAYYDRYGGGA 155
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 479,720,192
Number of Sequences: 1393205
Number of extensions: 11013910
Number of successful extensions: 40696
Number of sequences better than 10.0: 785
Number of HSP's better than 10.0 without gapping: 36939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40361
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 15362785481
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
