Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003505A_C01 KMC003505A_c01
(459 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_567533.1| calcineurin B-like protein 1; protein id: At4g1... 58 4e-08
ref|NP_195026.1| putative protein (fragment); protein id: At4g33... 58 4e-08
dbj|BAC42104.1| unknown protein [Arabidopsis thaliana] 58 4e-08
gb|AAG60198.1|AC084763_18 putative calcineurin [Oryza sativa] 57 7e-08
ref|NP_176629.1| calcineurin B-like protein; protein id: At1g644... 57 1e-07
>ref|NP_567533.1| calcineurin B-like protein 1; protein id: At4g17615.1, supported by
cDNA: gi_3309081 [Arabidopsis thaliana]
gi|11357210|pir||T51356 calcineurin B-like protein 1
[imported] - Arabidopsis thaliana
gi|3309082|gb|AAC26008.1| calcineurin B-like protein 1
[Arabidopsis thaliana] gi|26452611|dbj|BAC43389.1|
putative calcineurin B-like protein 1 [Arabidopsis
thaliana] gi|28973325|gb|AAO63987.1| putative
calcineurin B-like protein 1 [Arabidopsis thaliana]
Length = 213
Score = 58.2 bits (139), Expect = 4e-08
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = -1
Query: 453 YATKNPSLLKIMTLPYLKDITMAFPSFVLHTEVED 349
+ KNPSLLKIMTLPYL+DIT FPSFV H+EV++
Sbjct: 176 FVNKNPSLLKIMTLPYLRDITTTFPSFVFHSEVDE 210
>ref|NP_195026.1| putative protein (fragment); protein id: At4g33000.1 [Arabidopsis
thaliana] gi|27451196|gb|AAO14864.1| calcineurin B-like
protein [Arabidopsis thaliana]
gi|29150248|gb|AAO72364.1| calcineurin B-like protein 10
[Arabidopsis thaliana]
Length = 256
Score = 58.2 bits (139), Expect = 4e-08
Identities = 26/36 (72%), Positives = 31/36 (85%)
Frame = -1
Query: 456 LYATKNPSLLKIMTLPYLKDITMAFPSFVLHTEVED 349
+Y K+PSLLK MTLPYLKD+T AFPSF+ +TEVED
Sbjct: 221 VYVHKHPSLLKNMTLPYLKDVTTAFPSFIFNTEVED 256
>dbj|BAC42104.1| unknown protein [Arabidopsis thaliana]
Length = 246
Score = 58.2 bits (139), Expect = 4e-08
Identities = 26/36 (72%), Positives = 31/36 (85%)
Frame = -1
Query: 456 LYATKNPSLLKIMTLPYLKDITMAFPSFVLHTEVED 349
+Y K+PSLLK MTLPYLKD+T AFPSF+ +TEVED
Sbjct: 211 VYVHKHPSLLKNMTLPYLKDVTTAFPSFIFNTEVED 246
>gb|AAG60198.1|AC084763_18 putative calcineurin [Oryza sativa]
Length = 161
Score = 57.4 bits (137), Expect = 7e-08
Identities = 25/35 (71%), Positives = 31/35 (88%)
Frame = -1
Query: 453 YATKNPSLLKIMTLPYLKDITMAFPSFVLHTEVED 349
+ ++NPSLLKIMTLPYLKDIT FPSFV ++EV+D
Sbjct: 124 FVSRNPSLLKIMTLPYLKDITTTFPSFVFNSEVDD 158
>ref|NP_176629.1| calcineurin B-like protein; protein id: At1g64480.1, supported by
cDNA: gi_15866275, supported by cDNA: gi_9965361
[Arabidopsis thaliana]
gi|9965362|gb|AAG10058.1|AF290433_1 calcineurin B-like
protein 8 [Arabidopsis thaliana]
gi|15866276|gb|AAL10300.1|AF411957_1 calcineurin B-like
protein 8 [Arabidopsis thaliana]
Length = 214
Score = 56.6 bits (135), Expect = 1e-07
Identities = 26/37 (70%), Positives = 31/37 (83%)
Frame = -1
Query: 459 KLYATKNPSLLKIMTLPYLKDITMAFPSFVLHTEVED 349
K KNPS+LK MTLPYLK++T+AFPSFVL +EVED
Sbjct: 178 KELVAKNPSILKNMTLPYLKEVTLAFPSFVLDSEVED 214
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 357,515,235
Number of Sequences: 1393205
Number of extensions: 6560011
Number of successful extensions: 13591
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 13422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13586
length of database: 448,689,247
effective HSP length: 112
effective length of database: 292,650,287
effective search space used: 11706011480
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
