Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003103A_C01 KMC003103A_c01
(611 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC17529.1| aquaporin 2 [Samanea saman] 197 9e-50
pir||T06434 plasma membrane intrinsic protein 1 - soybean gi|886... 193 2e-48
gb|AAL49751.1|AF452013_1 aquaporin-like protein [Petunia x hybrida] 192 4e-48
dbj|BAA32778.1| Plasma membrane aquaporin (PAQ2) [Raphanus sativus] 190 1e-47
dbj|BAB40143.1| plasma membrane intrinsic protein 2-2 [Pyrus com... 190 1e-47
>gb|AAC17529.1| aquaporin 2 [Samanea saman]
Length = 287
Score = 197 bits (501), Expect = 9e-50
Identities = 94/99 (94%), Positives = 95/99 (95%)
Frame = -2
Query: 610 TDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGAAVIFNQSKPWDDH 431
TDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARS GAAVIFNQ K WDDH
Sbjct: 189 TDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIFNQQKAWDDH 248
Query: 430 WIFWVGPFIGAAIAAFYHQFILRAGAVKALGSFRSNPTV 314
WIFWVGPFIGAAIAAFYHQFILRAGA KALGSFRSNP+V
Sbjct: 249 WIFWVGPFIGAAIAAFYHQFILRAGAAKALGSFRSNPSV 287
>pir||T06434 plasma membrane intrinsic protein 1 - soybean
gi|886100|gb|AAA69490.1| putative water channel protein;
plasmalemma intrinsic protein; similar to Arabidopsis
Pip2a gene product, PIR Accession Number S44084
Length = 285
Score = 193 bits (490), Expect = 2e-48
Identities = 90/99 (90%), Positives = 94/99 (94%)
Frame = -2
Query: 610 TDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGAAVIFNQSKPWDDH 431
TDPKR+ARDSHVPVLAPLPIGFAVFMVHLA IPVTGTGINPARS GAAV++NQ K WDDH
Sbjct: 187 TDPKRNARDSHVPVLAPLPIGFAVFMVHLANIPVTGTGINPARSLGAAVMYNQQKAWDDH 246
Query: 430 WIFWVGPFIGAAIAAFYHQFILRAGAVKALGSFRSNPTV 314
WIFWVGPFIGAAIAAFYHQFILRAGA KALGSFRSNPT+
Sbjct: 247 WIFWVGPFIGAAIAAFYHQFILRAGAAKALGSFRSNPTI 285
>gb|AAL49751.1|AF452013_1 aquaporin-like protein [Petunia x hybrida]
Length = 256
Score = 192 bits (487), Expect = 4e-48
Identities = 90/98 (91%), Positives = 93/98 (94%)
Frame = -2
Query: 610 TDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGAAVIFNQSKPWDDH 431
TDPKRSARDSHVPVLAPLPIGFAVFMVHLATIP+TGTGINPARSFGAAVI+NQ K WDD
Sbjct: 158 TDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNQDKAWDDQ 217
Query: 430 WIFWVGPFIGAAIAAFYHQFILRAGAVKALGSFRSNPT 317
WIFWVGPFIGA IAA YHQF+LRAGAVKALGSFRSNPT
Sbjct: 218 WIFWVGPFIGALIAALYHQFVLRAGAVKALGSFRSNPT 255
>dbj|BAA32778.1| Plasma membrane aquaporin (PAQ2) [Raphanus sativus]
Length = 287
Score = 190 bits (482), Expect = 1e-47
Identities = 89/99 (89%), Positives = 93/99 (93%)
Frame = -2
Query: 610 TDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGAAVIFNQSKPWDDH 431
TDPKRSARDSHVPVLAPLPIGFAVFMVHLATIP+TGTGINPARSFGAAVIFN+SKPWDDH
Sbjct: 189 TDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNESKPWDDH 248
Query: 430 WIFWVGPFIGAAIAAFYHQFILRAGAVKALGSFRSNPTV 314
WIFWVGPFIGAAIAAFYHQF+LRA K+LGSFRS V
Sbjct: 249 WIFWVGPFIGAAIAAFYHQFVLRASGSKSLGSFRSAANV 287
>dbj|BAB40143.1| plasma membrane intrinsic protein 2-2 [Pyrus communis]
Length = 287
Score = 190 bits (482), Expect = 1e-47
Identities = 90/99 (90%), Positives = 94/99 (94%)
Frame = -2
Query: 610 TDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGAAVIFNQSKPWDDH 431
TDPKRSARDSHVPVLAPLPIGFAVF+VHLATIP+TGTGINPARS GAAVI+N+ K WDD
Sbjct: 189 TDPKRSARDSHVPVLAPLPIGFAVFIVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQ 248
Query: 430 WIFWVGPFIGAAIAAFYHQFILRAGAVKALGSFRSNPTV 314
WIFWVGPFIGAAIAAFYHQFILRAGAVKALGSFRSNP V
Sbjct: 249 WIFWVGPFIGAAIAAFYHQFILRAGAVKALGSFRSNPHV 287
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 577,425,482
Number of Sequences: 1393205
Number of extensions: 13320868
Number of successful extensions: 49847
Number of sequences better than 10.0: 592
Number of HSP's better than 10.0 without gapping: 46795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49452
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 24568846532
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
