Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002046A_C02 KMC002046A_c02
(836 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T17106 hypothetical protein pAFD103 - apple tree (fragment)... 187 7e-52
ref|NP_565603.1| expressed protein; protein id: At2g25670.1, sup... 174 2e-42
gb|AAM61508.1| unknown [Arabidopsis thaliana] 172 5e-42
gb|AAL38743.1| unknown protein [Arabidopsis thaliana] 172 7e-42
ref|NP_194987.1| putative protein; protein id: At4g32610.1 [Arab... 151 1e-35
>pir||T17106 hypothetical protein pAFD103 - apple tree (fragment)
gi|1732363|gb|AAC06385.1| early fruit mRNA [Malus x
domestica]
Length = 197
Score = 187 bits (476), Expect(2) = 7e-52
Identities = 111/157 (70%), Positives = 121/157 (76%), Gaps = 3/157 (1%)
Frame = -3
Query: 831 VKKHAEVSAPPPLPPKETERQLSXKERKKKELAELEALLADFGVAPKESTDGQDETQGAP 652
VKK A V P PPKE E+QLS KERKKKELAELEALLADFGVAPKES D QDE+QG
Sbjct: 35 VKKPAYV----PAPPKEAEKQLSKKERKKKELAELEALLADFGVAPKES-DSQDESQGVA 89
Query: 651 QDKKGDEADGDGEKKETTAAGGSKNAKKKKKKDKASKEVKESQDQPNSSDTNNGPDL--- 481
+ K + +GDGEKKE +A SK+AKKKKKKDKASKEVKESQDQPN+S NGP
Sbjct: 90 LE-KDNAPNGDGEKKENQSA-ESKSAKKKKKKDKASKEVKESQDQPNNSGATNGPSEVTG 147
Query: 480 AENPEEDASTVDVKERLKKVASLKKKKSSKEMDAAAK 370
AE EED S +DVKERLKKV S KKKKSSKE+DAAAK
Sbjct: 148 AEQAEEDTSNIDVKERLKKVVSGKKKKSSKELDAAAK 184
Score = 39.3 bits (90), Expect(2) = 7e-52
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = -2
Query: 328 AAAKKKEKNHYNQQPVR 278
AAAKKKEKNHYNQQPVR
Sbjct: 181 AAAKKKEKNHYNQQPVR 197
>ref|NP_565603.1| expressed protein; protein id: At2g25670.1, supported by cDNA:
12261., supported by cDNA: gi_17529065 [Arabidopsis
thaliana] gi|25412339|pir||C84651 hypothetical protein
At2g25670 [imported] - Arabidopsis thaliana
gi|4874305|gb|AAD31367.1| expressed protein [Arabidopsis
thaliana] gi|23297388|gb|AAN12958.1| unknown protein
[Arabidopsis thaliana]
Length = 318
Score = 174 bits (440), Expect = 2e-42
Identities = 103/177 (58%), Positives = 128/177 (72%), Gaps = 1/177 (0%)
Frame = -3
Query: 834 EVKKHAEVSAPPPLPPKETERQLSXKERKKKELAELEALLADFGVAPKESTDGQDETQGA 655
EVKK EV P PPKE ERQLS KERKKKELAELEALLADFGVAPKE+ +G +E+Q A
Sbjct: 140 EVKKAPEV----PAPPKEAERQLSKKERKKKELAELEALLADFGVAPKEN-NGLEESQEA 194
Query: 654 PQDKKGDEADGDGEKKETTAAGGSKNAKKKKKKDKASKEVKESQDQPNSSDTNNGPDLA- 478
Q+KK D +G+GEKKE A G SK +KKKKKKDK KEVKESQ+Q +++ + + A
Sbjct: 195 GQEKKED-VNGEGEKKENAAGGESKASKKKKKKDK-QKEVKESQEQQANNNADAVDEAAG 252
Query: 477 ENPEEDASTVDVKERLKKVASLKKKKSSKEMDAAAKAAAPRGRGQGMQSLLQQRKRR 307
P E+ S +DVKER+KK+AS+KKKKS KE+DAAAKAAA + + ++K +
Sbjct: 253 SEPTEEESPIDVKERIKKLASMKKKKSGKEVDAAAKAAAEEAAARRKKLAAAKKKEK 309
Score = 44.3 bits (103), Expect = 0.002
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = -2
Query: 343 RHAKLAAAKKKEKNHYNQQPVR 278
R KLAAAKKKEKNHYNQQPVR
Sbjct: 297 RRKKLAAAKKKEKNHYNQQPVR 318
>gb|AAM61508.1| unknown [Arabidopsis thaliana]
Length = 318
Score = 172 bits (436), Expect = 5e-42
Identities = 101/177 (57%), Positives = 128/177 (72%), Gaps = 1/177 (0%)
Frame = -3
Query: 834 EVKKHAEVSAPPPLPPKETERQLSXKERKKKELAELEALLADFGVAPKESTDGQDETQGA 655
EVKK EV P PPKE ERQLS KERKKKELAELEALLADFGVAPKE+ +G +E+Q A
Sbjct: 140 EVKKAPEV----PAPPKEAERQLSKKERKKKELAELEALLADFGVAPKEN-NGLEESQEA 194
Query: 654 PQDKKGDEADGDGEKKETTAAGGSKNAKKKKKKDKASKEVKESQDQPNSSDTNNGPDLA- 478
Q+KK ++ +G+GEKKE A G SK +KKKKKKDK KEVKESQ+Q +++ + + A
Sbjct: 195 GQEKK-EDVNGEGEKKENAAGGESKASKKKKKKDK-QKEVKESQEQQANNNADAVDEAAG 252
Query: 477 ENPEEDASTVDVKERLKKVASLKKKKSSKEMDAAAKAAAPRGRGQGMQSLLQQRKRR 307
P E+ S +DVKER+KK+AS+KKKKS KE+DA AKAAA + + ++K +
Sbjct: 253 SEPTEEESPIDVKERIKKLASMKKKKSGKEVDAXAKAAAEEAAARRKKLAAAKKKEK 309
Score = 44.3 bits (103), Expect = 0.002
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = -2
Query: 343 RHAKLAAAKKKEKNHYNQQPVR 278
R KLAAAKKKEKNHYNQQPVR
Sbjct: 297 RRKKLAAAKKKEKNHYNQQPVR 318
>gb|AAL38743.1| unknown protein [Arabidopsis thaliana]
Length = 318
Score = 172 bits (435), Expect = 7e-42
Identities = 102/177 (57%), Positives = 127/177 (71%), Gaps = 1/177 (0%)
Frame = -3
Query: 834 EVKKHAEVSAPPPLPPKETERQLSXKERKKKELAELEALLADFGVAPKESTDGQDETQGA 655
EVKK EV P PPKE ERQLS KERKKKELAELEALLADFGVAPKE+ +G +E+Q A
Sbjct: 140 EVKKAPEV----PAPPKEAERQLSKKERKKKELAELEALLADFGVAPKEN-NGLEESQEA 194
Query: 654 PQDKKGDEADGDGEKKETTAAGGSKNAKKKKKKDKASKEVKESQDQPNSSDTNNGPDLA- 478
Q+KK D +G+GEKKE A G SK +KKKKKKDK KEVKESQ+Q +++ + + A
Sbjct: 195 GQEKKED-VNGEGEKKENAAGGESKASKKKKKKDK-QKEVKESQEQQANNNADAVDEAAG 252
Query: 477 ENPEEDASTVDVKERLKKVASLKKKKSSKEMDAAAKAAAPRGRGQGMQSLLQQRKRR 307
P E+ S +DVKER+KK+AS+KKKKS KE+DAAAKAA + + ++K +
Sbjct: 253 SEPTEEESPIDVKERIKKLASMKKKKSGKEVDAAAKAAPEEAAARRKKLAAAKKKEK 309
Score = 46.2 bits (108), Expect = 6e-04
Identities = 21/28 (75%), Positives = 22/28 (78%)
Frame = -2
Query: 361 PKRPRPRHAKLAAAKKKEKNHYNQQPVR 278
P+ R KLAAAKKKEKNHYNQQPVR
Sbjct: 291 PEEAAARRKKLAAAKKKEKNHYNQQPVR 318
>ref|NP_194987.1| putative protein; protein id: At4g32610.1 [Arabidopsis thaliana]
gi|7486410|pir||T04465 hypothetical protein F4D11.190 -
Arabidopsis thaliana gi|3063709|emb|CAA18600.1| putative
protein [Arabidopsis thaliana]
gi|7270165|emb|CAB79978.1| putative protein [Arabidopsis
thaliana]
Length = 557
Score = 151 bits (382), Expect = 1e-35
Identities = 94/177 (53%), Positives = 121/177 (68%)
Frame = -3
Query: 834 EVKKHAEVSAPPPLPPKETERQLSXKERKKKELAELEALLADFGVAPKESTDGQDETQGA 655
EVKK EV APP KE ERQLS KERKKKELAELEALLADFGVA K+ +GQ ++Q
Sbjct: 143 EVKKAPEVRAPP----KEAERQLSKKERKKKELAELEALLADFGVATKDE-NGQQDSQDK 197
Query: 654 PQDKKGDEADGDGEKKETTAAGGSKNAKKKKKKDKASKEVKESQDQPNSSDTNNGPDLAE 475
+ K E + +GEKKE T G SK +KKKKKKDK KE+KESQ + S+ ++ +
Sbjct: 198 GEKK---EVNDEGEKKENT-TGESKASKKKKKKDK-QKELKESQSEVKSN--SDAASESA 250
Query: 474 NPEEDASTVDVKERLKKVASLKKKKSSKEMDAAAKAAAPRGRGQGMQSLLQQRKRRR 304
EE +S++DVKERLKK+AS+KKKKSSKE+D A+ AAA + + ++K ++
Sbjct: 251 EQEESSSSIDVKERLKKIASMKKKKSSKEVDGASTAAAKEAAARKAKLAAAKKKEKK 307
Score = 43.5 bits (101), Expect = 0.004
Identities = 23/39 (58%), Positives = 26/39 (65%)
Frame = -2
Query: 358 KRPRPRHAKLAAAKKKEKNHYNQQPVR*KETLLFNINTG 242
K R AKLAAAKKKEK +YNQQPVR LL ++ G
Sbjct: 289 KEAAARKAKLAAAKKKEKKNYNQQPVRQFVVLLATLDDG 327
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 725,416,550
Number of Sequences: 1393205
Number of extensions: 17105399
Number of successful extensions: 104817
Number of sequences better than 10.0: 2811
Number of HSP's better than 10.0 without gapping: 78058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 96228
length of database: 448,689,247
effective HSP length: 122
effective length of database: 278,718,237
effective search space used: 43480044972
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
