Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC001435A_C01 KMC001435A_c01
(469 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAD70620.1| branched-chain amino acid aminotransferase-like ... 67 7e-11
ref|NP_568496.1| putative amino acid aminotransferase; protein i... 63 1e-09
gb|AAF27025.1|AC009177_15 putative branched-chain amino acid ami... 62 3e-09
ref|NP_187170.2| putative branched-chain amino acid aminotransfe... 62 3e-09
ref|NP_560638.1| branched-chain amino acid aminotransferase (ilv... 50 1e-05
>emb|CAD70620.1| branched-chain amino acid aminotransferase-like protein [Cicer
arietinum]
Length = 551
Score = 67.4 bits (163), Expect = 7e-11
Identities = 31/35 (88%), Positives = 33/35 (93%)
Frame = -1
Query: 445 GTMGELSPVVKVDGRTIGTGKVGPVTRKLQAAYKE 341
GTMGELSPVVKVDGRTIG GKVGP+TRKLQ AYK+
Sbjct: 505 GTMGELSPVVKVDGRTIGNGKVGPITRKLQVAYKK 539
>ref|NP_568496.1| putative amino acid aminotransferase; protein id: At5g27410.1,
supported by cDNA: gi_13605848 [Arabidopsis thaliana]
gi|26391648|sp|Q9ASR4|BAL2_ARATH Branched-chain amino
acid aminotransferase-like protein 2
gi|13605849|gb|AAK32910.1|AF367323_1
AT5g27410/F21A20_120 [Arabidopsis thaliana]
gi|23308233|gb|AAN18086.1| At5g27410/F21A20_120
[Arabidopsis thaliana]
Length = 559
Score = 63.2 bits (152), Expect = 1e-09
Identities = 29/35 (82%), Positives = 32/35 (90%)
Frame = -1
Query: 445 GTMGELSPVVKVDGRTIGTGKVGPVTRKLQAAYKE 341
GTMGELSPVVK+DGR IG GKVGPVTR+LQ AYK+
Sbjct: 503 GTMGELSPVVKIDGRVIGEGKVGPVTRRLQNAYKK 537
>gb|AAF27025.1|AC009177_15 putative branched-chain amino acid aminotransferase [Arabidopsis
thaliana]
Length = 490
Score = 62.0 bits (149), Expect = 3e-09
Identities = 29/35 (82%), Positives = 31/35 (87%)
Frame = -1
Query: 445 GTMGELSPVVKVDGRTIGTGKVGPVTRKLQAAYKE 341
GTMGELSPVVK+DGR IG GKVGPVTR LQ AYK+
Sbjct: 441 GTMGELSPVVKIDGRVIGDGKVGPVTRTLQNAYKK 475
>ref|NP_187170.2| putative branched-chain amino acid aminotransferase; protein id:
At3g05190.1, supported by cDNA: gi_18087611, supported
by cDNA: gi_19699147 [Arabidopsis thaliana]
gi|26391555|sp|Q8W0Z7|BAL1_ARATH Branched-chain amino
acid aminotransferase-like protein 1 (Atbcat-like)
gi|18087612|gb|AAL58936.1|AF462849_1 putative
branched-chain amino acid aminotransferase [Arabidopsis
thaliana] gi|19699148|gb|AAL90940.1| AT3g05190/T12H1_16
[Arabidopsis thaliana]
Length = 555
Score = 62.0 bits (149), Expect = 3e-09
Identities = 29/35 (82%), Positives = 31/35 (87%)
Frame = -1
Query: 445 GTMGELSPVVKVDGRTIGTGKVGPVTRKLQAAYKE 341
GTMGELSPVVK+DGR IG GKVGPVTR LQ AYK+
Sbjct: 506 GTMGELSPVVKIDGRVIGDGKVGPVTRTLQNAYKK 540
>ref|NP_560638.1| branched-chain amino acid aminotransferase (ilvE) [Pyrobaculum
aerophilum] gi|18161545|gb|AAL64820.1| branched-chain
amino acid aminotransferase (ilvE) [Pyrobaculum
aerophilum]
Length = 303
Score = 50.1 bits (118), Expect = 1e-05
Identities = 22/41 (53%), Positives = 29/41 (70%)
Frame = -1
Query: 445 GTMGELSPVVKVDGRTIGTGKVGPVTRKLQAAYKETDRTRL 323
GT E++PVV+VDGRTIGTGK GP+T K+ Y R ++
Sbjct: 252 GTAAEITPVVEVDGRTIGTGKPGPITTKIAELYSNVVRGKV 292
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 388,907,288
Number of Sequences: 1393205
Number of extensions: 7721113
Number of successful extensions: 19768
Number of sequences better than 10.0: 99
Number of HSP's better than 10.0 without gapping: 19332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19764
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 12232797444
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
