Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000447A_C01 KCC000447A_c01
(696 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_191174.1| PROBABLE EUKARYOTIC TRANSLATION INITIATION FACT... 165 1e-42
pir||T50773 translation initiation factor homolog p105 [imported... 161 2e-41
gb|AAL13083.1| putative translation-initiation factor 3 subunit ... 161 8e-41
dbj|BAC56812.1| putative Eukaryotic translation initiation facto... 157 4e-40
sp|Q9XHM1|IF38_MEDTR Eukaryotic translation initiation factor 3 ... 153 3e-39
>ref|NP_191174.1| PROBABLE EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 8
[Arabidopsis thaliana] gi|23503063|sp|O49160|IF38_ARATH
Eukaryotic translation initiation factor 3 subunit 8
(eIF3 p110) (eIF3c) (p105) gi|11282364|pir||T47732
probable translation initiation factor eIF-3 chain 8
F18O21.110 [imported] - Arabidopsis thaliana
gi|7572913|emb|CAB87414.1| PROBABLE EUKARYOTIC
TRANSLATION INITIATION FACTOR 3 SUBUNIT 8 [Arabidopsis
thaliana] gi|17381100|gb|AAL36362.1| putative eukaryotic
translation initiation factor 3 subunit 8 [Arabidopsis
thaliana] gi|25054977|gb|AAN71960.1| putative eukaryotic
translation initiation factor 3 subunit 8 [Arabidopsis
thaliana]
Length = 900
Score = 165 bits (418), Expect(2) = 1e-42
Identities = 92/214 (42%), Positives = 135/214 (62%), Gaps = 23/214 (10%)
Frame = +2
Query: 122 PRVYLKLLVDLEDYLNDTLANKELVKKKMSSTNAKALNTMKQRLKKHNTPLLEQLNKVRE 301
P +Y+K LV LED+LN+ LANKE KKKMS++N+KALN+MKQ+LKK+N + +NK RE
Sbjct: 106 PTLYIKTLVMLEDFLNEALANKE-AKKKMSTSNSKALNSMKQKLKKNNKLYEDDINKYRE 164
Query: 302 NP---------------DEEDEVSEADSSSSES-----GSDDERDAEE---RKQGALAAK 412
P D++DEV + D SS + GSD + + K + K
Sbjct: 165 APEVEEEKQPEDDDDDDDDDDEVEDDDDSSIDGPTVDPGSDVDEPTDNLTWEKMLSKKDK 224
Query: 413 AKDKLLTMDPKEITYEMVARKMREIVMARGRRGTDKQEAVEMLTYLATVARGAAQKFEVL 592
+KL+ DPKEIT++ V +K +EIV ARG++GT + E V+ LT+L +A+ AQK E+L
Sbjct: 225 LLEKLMNKDPKEITWDWVNKKFKEIVAARGKKGTARFELVDQLTHLTKIAKTPAQKLEIL 284
Query: 593 AQLNASLFDLNPGMHGHLPTATWRKAVVNLLEML 694
+ ++ FD+NPG+ GH+P W+K V+N+L +L
Sbjct: 285 FSVISAQFDVNPGLSGHMPINVWKKCVLNMLTIL 318
Score = 30.4 bits (67), Expect(2) = 1e-42
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3
Query: 6 EDIRNKMKINDWSAIQELFD 65
+ ++N MKINDW ++QE FD
Sbjct: 68 DQMKNAMKINDWVSLQENFD 87
>pir||T50773 translation initiation factor homolog p105 [imported] - Arabidopsis
thaliana gi|2789660|gb|AAC83464.1| eIF3c [Arabidopsis
thaliana]
Length = 900
Score = 161 bits (408), Expect(2) = 2e-41
Identities = 91/214 (42%), Positives = 133/214 (61%), Gaps = 23/214 (10%)
Frame = +2
Query: 122 PRVYLKLLVDLEDYLNDTLANKELVKKKMSSTNAKALNTMKQRLKKHNTPLLEQLNKVRE 301
P +Y+K LV LED+LN+ LANKE KKKMS++N+KALN+MKQ+LKK+N + +NK RE
Sbjct: 106 PTLYIKTLVMLEDFLNEALANKE-AKKKMSTSNSKALNSMKQKLKKNNKLYEDDINKYRE 164
Query: 302 NP---------------DEEDEVSEADSSSSES-----GSDDERDAEE---RKQGALAAK 412
P D++DEV + D SS + GSD + + K + K
Sbjct: 165 APEVEEEKQPEDDDDDDDDDDEVEDDDDSSIDGPTVDPGSDVDEPTDNLTWEKMLSKKDK 224
Query: 413 AKDKLLTMDPKEITYEMVARKMREIVMARGRRGTDKQEAVEMLTYLATVARGAAQKFEVL 592
+KL+ DPKEIT++ V +K +EIV AR ++GT + E V+ LT+L +A AQK E+L
Sbjct: 225 LLEKLMNKDPKEITWDWVNKKFKEIVAAREKKGTARFELVDQLTHLTKIANTPAQKLEIL 284
Query: 593 AQLNASLFDLNPGMHGHLPTATWRKAVVNLLEML 694
+ ++ FD+NPG+ GH+P W+K V+N+L +L
Sbjct: 285 FSVISAQFDVNPGLSGHMPINVWKKCVLNMLTIL 318
Score = 30.4 bits (67), Expect(2) = 2e-41
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3
Query: 6 EDIRNKMKINDWSAIQELFD 65
+ ++N MKINDW ++QE FD
Sbjct: 68 DQMKNAMKINDWVSLQENFD 87
>gb|AAL13083.1| putative translation-initiation factor 3 subunit [Prunus avium]
Length = 934
Score = 161 bits (407), Expect(2) = 8e-41
Identities = 94/234 (40%), Positives = 134/234 (57%), Gaps = 26/234 (11%)
Frame = +2
Query: 71 VTRALTWTRKFLSGPMLPRVYLKLLVDLEDYLNDTLANKELVKKKMSSTNAKALNTMKQR 250
+ + L + +P +Y+K LV LED+L LANK+ KKKMSS+NAKALN+MKQ+
Sbjct: 95 INKQLEKVMRITEAVKVPTLYIKALVLLEDFLAQALANKD-AKKKMSSSNAKALNSMKQK 153
Query: 251 LKKHNTPLLEQLNKVRENPDEEDEVSEADSSSSESGS---------------DDERDAEE 385
LKK+N E +NK RENP++ DE EA+ S + GS DD+ D EE
Sbjct: 154 LKKNNKQYEELINKYRENPEQSDEEKEAEEDSEDDGSVSEIEDPTDIVMSNSDDDGDEEE 213
Query: 386 -----------RKQGALAAKAKDKLLTMDPKEITYEMVARKMREIVMARGRRGTDKQEAV 532
K+ + K D+ DP EIT++ V +K +E+V ARGR+GT + E V
Sbjct: 214 DEKDDQTDEGWEKKMSKKDKLMDRQFMKDPSEITWDTVNKKFKEVVAARGRKGTGRFEQV 273
Query: 533 EMLTYLATVARGAAQKFEVLAQLNASLFDLNPGMHGHLPTATWRKAVVNLLEML 694
E LT+L VA+ AQK EV + ++ FD+N G++GH+P +K V N+ +L
Sbjct: 274 EQLTFLTKVAKTPAQKLEVFFSVVSAQFDVNHGLNGHMPINVRKKCVQNMQVIL 327
Score = 28.5 bits (62), Expect(2) = 8e-41
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 12 IRNKMKINDWSAIQELFDTL 71
++N M INDW ++QE FD +
Sbjct: 76 MKNAMNINDWVSLQESFDKI 95
>dbj|BAC56812.1| putative Eukaryotic translation initiation factor 3 subunit 8
[Oryza sativa (japonica cultivar-group)]
Length = 936
Score = 157 bits (396), Expect(2) = 4e-40
Identities = 91/220 (41%), Positives = 132/220 (59%), Gaps = 28/220 (12%)
Frame = +2
Query: 119 LPRVYLKLLVDLEDYLNDTLANKELVKKKMSSTNAKALNTMKQRLKKHNTPLLEQLNKVR 298
+P +Y+K LV LED+L + LANKE KKKMSS+NAKALN MKQ+LKK+N + + R
Sbjct: 116 VPNMYVKALVLLEDFLAEALANKE-AKKKMSSSNAKALNAMKQKLKKNNKQYENLIQECR 174
Query: 299 ENPDE---------------EDEVSEAD---------SSSSESGSDDERDAEE----RKQ 394
E+P+ +D+ S+AD S S E G DDE ++ K+
Sbjct: 175 EHPERFEDDDVEDKDDDDETDDDASDADIEDPEKMVMSESEEEGDDDEEGDQDGGAWEKK 234
Query: 395 GALAAKAKDKLLTMDPKEITYEMVARKMREIVMARGRRGTDKQEAVEMLTYLATVARGAA 574
+ K DK DP EIT+++V +K++EIV +RG++GT + E VE LT+L VA+ A
Sbjct: 235 ISKKDKLMDKQFLKDPSEITWDIVDKKLKEIVASRGKKGTGRIERVEQLTFLTRVAKTPA 294
Query: 575 QKFEVLAQLNASLFDLNPGMHGHLPTATWRKAVVNLLEML 694
QK E+L + ++ FD+NP + GH+P W+K V N+L +L
Sbjct: 295 QKLEILFHVISAQFDVNPSLLGHMPVNMWKKCVNNMLLVL 334
Score = 42.0 bits (97), Expect = 0.009
Identities = 39/118 (33%), Positives = 46/118 (38%), Gaps = 11/118 (9%)
Frame = +1
Query: 253 EEAQHAPAGAAQQGPREPRRGGRG-----VGGGQQQQRERQRRRARRRGAQAGR---PGR 408
E A A G +G RRGG G +G Q+ Q R+ R +GR PGR
Sbjct: 821 ERAYEAKTGGTLEGAPPRRRGGDGQDSSNLGKWQENFVSSQGRQGGGRSGYSGRVGGPGR 880
Query: 409 QGQGQAADHGPQGDHLRDGGA---QDEGDRHGQGPPRHRQAGGGGDADLPGHRGARRG 573
G G D G QG GG QD G Q R GG G A + + RG
Sbjct: 881 GGGGYQRDRGSQGSRGGYGGGSRFQDGGRSRNQSGSMAR--GGDGGARMVSLNRSGRG 936
Score = 30.4 bits (67), Expect(2) = 4e-40
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 6 EDIRNKMKINDWSAIQELFDTL 71
+ +RN MKINDW +QE F+ L
Sbjct: 79 DQMRNAMKINDWVNLQESFEKL 100
>sp|Q9XHM1|IF38_MEDTR Eukaryotic translation initiation factor 3 subunit 8 (eIF3 p110)
(eIF3c) gi|11282366|pir||T50774 probable translation
initiation factor [imported] - barrel medic
gi|5106926|gb|AAD39891.1|AF106930_1 putative translation
initiation protein [Medicago truncatula]
Length = 935
Score = 153 bits (387), Expect(2) = 3e-39
Identities = 90/237 (37%), Positives = 134/237 (55%), Gaps = 29/237 (12%)
Frame = +2
Query: 71 VTRALTWTRKFLSGPMLPRVYLKLLVDLEDYLNDTLANKELVKKKMSSTNAKALNTMKQR 250
+ + L + + +P +Y+K LV LED+L ANK+ KKKMS +NAKA N+MKQ+
Sbjct: 98 INKQLEKVMRVIESQKIPNLYIKALVMLEDFLAQASANKD-AKKKMSPSNAKAFNSMKQK 156
Query: 251 LKKHNTPLLEQLNKVRENPDEEDEVSEADSSSSESGSDDER-------------DAEERK 391
LKK+N + + K RE+P+ E E E D S E SDDE D+E +
Sbjct: 157 LKKNNKQYEDLIIKCRESPESEGEKDEDDEDSDEYESDDEMIEPDQLRKPEPVSDSETSE 216
Query: 392 QG--------------ALAAKAK--DKLLTMDPKEITYEMVARKMREIVMARGRRGTDKQ 523
G L+ K + +K+ P EIT++ V +K +EI+ ARGR+GT +
Sbjct: 217 LGNDRPGDDGDAPWDQKLSKKDRLLEKMFMKKPSEITWDTVNKKFKEILEARGRKGTGRF 276
Query: 524 EAVEMLTYLATVARGAAQKFEVLAQLNASLFDLNPGMHGHLPTATWRKAVVNLLEML 694
E VE LT+L VA+ AQK ++L + ++ FD+NPG+ GH+P + W+K V N+L +L
Sbjct: 277 EQVEQLTFLTKVAKTPAQKLQILFSVVSAQFDVNPGLSGHMPISVWKKCVQNMLVIL 333
Score = 30.8 bits (68), Expect(2) = 3e-39
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 6 EDIRNKMKINDWSAIQELFDTL 71
+ I+N +KINDW ++QE FD +
Sbjct: 77 DQIKNAIKINDWVSLQESFDKI 98
