Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000431A_C01 KCC000431A_c01
(502 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC04807.1| unnamed protein product [Homo sapiens] 40 0.016
ref|ZP_00123977.1| COG0810: Periplasmic protein TonB, links inne... 38 0.061
ref|NP_644123.1| conserved hypothetical protein [Xanthomonas axo... 37 0.10
ref|NP_792293.1| tonB protein [Pseudomonas syringae pv. tomato s... 37 0.10
ref|XP_327059.1| predicted protein [Neurospora crassa] gi|183760... 37 0.10
>dbj|BAC04807.1| unnamed protein product [Homo sapiens]
Length = 123
Score = 40.0 bits (92), Expect = 0.016
Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Frame = +1
Query: 259 LTAAPARYSTASNFPQPLLQRRSQQHRRQAQRPRWRASPTPPCASSSRARRRWCSLCLRA 438
L APA+ ++ S P P+ Q++S+ R+A PP A R R C C
Sbjct: 36 LQMAPAKATSHSPLPSPVTQQQSRGSSREALH-------VPPKAGLPRLHGRVCIFCCCD 88
Query: 439 MRRP------WRRWWWTWRT 480
+RRP RWW W T
Sbjct: 89 LRRPLSEAGATTRWWDEWVT 108
>ref|ZP_00123977.1| COG0810: Periplasmic protein TonB, links inner and outer membranes
[Pseudomonas syringae pv. syringae B728a]
Length = 277
Score = 38.1 bits (87), Expect = 0.061
Identities = 19/42 (45%), Positives = 21/42 (49%), Gaps = 1/42 (2%)
Frame = -2
Query: 474 PGPP-PASPRTTHCPQAQAAPPPARPAGRCAGWCRGSAPSRP 352
P PP PA+P P A AP P PA AG+ R AP P
Sbjct: 162 PAPPVPAAPVAAPAPPAAPAPKPVTPASASAGYLRNPAPEYP 203
>ref|NP_644123.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306] gi|21110214|gb|AAM38659.1| conserved
hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 347
Score = 37.4 bits (85), Expect = 0.10
Identities = 30/119 (25%), Positives = 44/119 (36%), Gaps = 15/119 (12%)
Frame = +1
Query: 166 YQHLLATSYPRRR--RPSSQAQHPLTSALSLQALTAAPARYSTASNFPQPLLQRRSQQHR 339
Y+ LLA + PR P +QA L A ++ +PA+ + L Q
Sbjct: 127 YRQLLARACPRDAAGNPDAQAWRALAEAAQVELRDLSPAQLTRLGQLRDSALAGMPLQAA 186
Query: 340 RQAQRPRWRASPTPPCASSSRARRRW-------------CSLCLRAMRRPWRRWWWTWR 477
A +P P A+ +RARR+W + A+ WWWT R
Sbjct: 187 APAAPAEPAPAPRRPAAARARARRQWQWPQLERRHAGVALGVLAVALLLAVLGWWWTHR 245
>ref|NP_792293.1| tonB protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|28852916|gb|AAO55988.1| tonB protein [Pseudomonas
syringae pv. tomato str. DC3000]
Length = 273
Score = 37.4 bits (85), Expect = 0.10
Identities = 19/42 (45%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -2
Query: 474 PGPP-PASPRTTHCPQAQAAPPPARPAGRCAGWCRGSAPSRP 352
P PP PA P P A AP P PA AG+ R AP P
Sbjct: 158 PAPPVPAPPVAAPAPPAPPAPKPVTPASASAGYLRNPAPEYP 199
>ref|XP_327059.1| predicted protein [Neurospora crassa] gi|18376018|emb|CAB91752.2|
related to pre-mRNA splicing SRp75 [Neurospora crassa]
gi|28925300|gb|EAA34378.1| predicted protein [Neurospora
crassa]
Length = 462
Score = 37.4 bits (85), Expect = 0.10
Identities = 29/89 (32%), Positives = 42/89 (46%), Gaps = 4/89 (4%)
Frame = +1
Query: 169 QHLLATSYPRRRRPS--SQAQHPLTSALSLQALTAAPARYST--ASNFPQPLLQRRSQQH 336
Q L T R R PS S+ L+ + S A + Y+T S++P+ +RRS
Sbjct: 175 QALAVTDARRARSPSRDSRISRGLSRSRSRSRSRGARSIYTTDDESDYPRSSRRRRSPSS 234
Query: 337 RRQAQRPRWRASPTPPCASSSRARRRWCS 423
RR R R R SP+P A +A+ + S
Sbjct: 235 RRSRSRSRSRRSPSPAAAPLRKAKDLYSS 263
