Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000421A_C01 KCC000421A_c01
(816 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB19776.1| contains EST AU078264(S21150)~unknown protein [O... 88 1e-16
ref|NP_566100.2| chloroplast protein CP12 -related [Arabidopsis ... 82 8e-15
pir||T02941 CP12 protein precursor, chloroplast - common tobacco... 82 1e-14
pir||T06562 CP12 protein precursor, chloroplast - garden pea gi|... 79 7e-14
gb|AAK97687.1| At2g47400/T8I13.24 [Arabidopsis thaliana] gi|2350... 78 2e-13
>dbj|BAB19776.1| contains EST AU078264(S21150)~unknown protein [Oryza sativa
(japonica cultivar-group)] gi|21104567|dbj|BAB93161.1|
B1146F03.16 [Oryza sativa (japonica cultivar-group)]
Length = 124
Score = 88.2 bits (217), Expect = 1e-16
Identities = 55/122 (45%), Positives = 76/122 (62%), Gaps = 20/122 (16%)
Frame = +2
Query: 17 SVVISRPA------VRPVSTRRAVV-----------VRASGQPAV--DLNKKVQDAVKEA 139
+V +S PA VRPV+ VV VRASG PA D++ K+ +++ +A
Sbjct: 7 NVGLSTPAAAASSLVRPVAGAGRVVFPRVGRGGFAAVRASG-PATPPDISDKMSESIDKA 65
Query: 140 EDACAKGT-SADCAVAWDTVEELSAAVSHKKDAVKADVTLTDPLEAFCKDAPDADECRVY 316
++ACA+ T S +CA AWD VEELSAA SH +D +K +DPLEA+CKD P+ DECR Y
Sbjct: 66 KEACAEDTASGECAAAWDEVEELSAAASHARDKLK---ETSDPLEAYCKDNPETDECRTY 122
Query: 317 ED 322
++
Sbjct: 123 DN 124
>ref|NP_566100.2| chloroplast protein CP12 -related [Arabidopsis thaliana]
gi|25348231|pir||G84914 probable chloroplast protein
CP12 [imported] - Arabidopsis thaliana
gi|17065526|gb|AAL32917.1| putative chloroplast protein
CP12 [Arabidopsis thaliana] gi|21387021|gb|AAM47914.1|
putative chloroplast protein CP12 [Arabidopsis thaliana]
Length = 124
Score = 82.4 bits (202), Expect = 8e-15
Identities = 41/91 (45%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
Frame = +2
Query: 53 STRRAVVVRASGQPAVDLNKKVQDAVKEAEDACAKG-TSADCAVAWDTVEELSAAVSHKK 229
S +R VVV+A+ + ++++KV+ +++EA++ CA S +C AWD VEELSAA SH +
Sbjct: 38 SMKRMVVVKATSEG--EISEKVEKSIQEAKETCADDPVSGECVAAWDEVEELSAAASHAR 95
Query: 230 DAVKADVTLTDPLEAFCKDAPDADECRVYED 322
D KA +DPLE +C D P+ DECR Y++
Sbjct: 96 DKKKAGG--SDPLEEYCNDNPETDECRTYDN 124
>pir||T02941 CP12 protein precursor, chloroplast - common tobacco
gi|1617197|emb|CAA96569.1| CP12 [Nicotiana tabacum]
gi|25990286|gb|AAK49535.2| chloroplast protein 12
[Nicotiana tabacum]
Length = 132
Score = 81.6 bits (200), Expect = 1e-14
Identities = 41/81 (50%), Positives = 53/81 (64%), Gaps = 1/81 (1%)
Frame = +2
Query: 83 SGQPAVDLNKKVQDAVKEAEDACAKG-TSADCAVAWDTVEELSAAVSHKKDAVKADVTLT 259
S P L+ V ++VKEAE+ACA+ S +CA AWD VEE SAA SH +D K +
Sbjct: 55 SATPDNKLSDLVAESVKEAEEACAENPVSGECAAAWDVVEEASAAASHARDKKKES---S 111
Query: 260 DPLEAFCKDAPDADECRVYED 322
DPLE +CKD P+ DECR Y++
Sbjct: 112 DPLENYCKDNPETDECRTYDN 132
>pir||T06562 CP12 protein precursor, chloroplast - garden pea
gi|1617206|emb|CAA96570.1| CP12 [Pisum sativum]
Length = 127
Score = 79.3 bits (194), Expect = 7e-14
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 8/100 (8%)
Frame = +2
Query: 47 PVSTRRAV-------VVRASGQPAVDLNKKVQDAVKEAEDACAKG-TSADCAVAWDTVEE 202
P+STR+ + +V+ ++KKV++++K A++ CA S +C AWD VEE
Sbjct: 32 PLSTRQTLTGSGRMKIVQPVRAAPEQISKKVEESIKSAQETCADDPVSGECVAAWDEVEE 91
Query: 203 LSAAVSHKKDAVKADVTLTDPLEAFCKDAPDADECRVYED 322
LSAA SH +D K +DPLE +CKD P+ DEC+ Y++
Sbjct: 92 LSAAASHARDRKKE----SDPLEDYCKDNPETDECKTYDN 127
>gb|AAK97687.1| At2g47400/T8I13.24 [Arabidopsis thaliana]
gi|23505751|gb|AAN28735.1| At2g47400/T8I13.24
[Arabidopsis thaliana]
Length = 124
Score = 78.2 bits (191), Expect = 2e-13
Identities = 40/91 (43%), Positives = 61/91 (66%), Gaps = 1/91 (1%)
Frame = +2
Query: 53 STRRAVVVRASGQPAVDLNKKVQDAVKEAEDACAKG-TSADCAVAWDTVEELSAAVSHKK 229
S +R VVV+A+ + ++++KV+ +++EA++ CA S +C AWD VEELSAA SH +
Sbjct: 38 SMKRMVVVKATSEG--EISEKVEKSIQEAKETCADDPVSGECVAAWDEVEELSAAASHAR 95
Query: 230 DAVKADVTLTDPLEAFCKDAPDADECRVYED 322
D KA +DPLE +C D P+ DE R Y++
Sbjct: 96 DKKKAGG--SDPLEEYCNDNPETDEYRTYDN 124
