Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000419A_C01 KCC000419A_c01
(1587 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL79815.1|AF411119_1 ATP synthase F1F0 subunit 6 [Chlamydomo... 665 0.0
gb|AAN70986.1|AF388174_1 ATP synthase subunit 6 [Chlamydomonas r... 660 0.0
gb|AAL35726.1| ATP synthase subunit 6 [Chlamydomonas reinhardtii] 656 0.0
gb|AAF72060.1|AF204057_15 ATP synthase F0 subunit 6 [Scenedesmus... 137 7e-31
ref|NP_057983.1| ATPase subunit 6 [Scenedesmus obliquus] gi|7711... 137 7e-31
>gb|AAL79815.1|AF411119_1 ATP synthase F1F0 subunit 6 [Chlamydomonas reinhardtii]
gi|18874450|gb|AAL79816.1|AF411921_1 ATP synthase F1F0
subunit 6 [Chlamydomonas reinhardtii]
Length = 340
Score = 665 bits (1715), Expect = 0.0
Identities = 340/340 (100%), Positives = 340/340 (100%)
Frame = +3
Query: 15 MALQQAAPRVFGLLGRAPVALGQSGILTGSSGFKNQGFNGSLQSVENHVYAQAFSTSSQE 194
MALQQAAPRVFGLLGRAPVALGQSGILTGSSGFKNQGFNGSLQSVENHVYAQAFSTSSQE
Sbjct: 1 MALQQAAPRVFGLLGRAPVALGQSGILTGSSGFKNQGFNGSLQSVENHVYAQAFSTSSQE 60
Query: 195 EQAAPSIQGASGMKLPGMAGSMLLGKSRSGLRTGSMVPFAAQQAMNMSTAAQVQSGATVN 374
EQAAPSIQGASGMKLPGMAGSMLLGKSRSGLRTGSMVPFAAQQAMNMSTAAQVQSGATVN
Sbjct: 61 EQAAPSIQGASGMKLPGMAGSMLLGKSRSGLRTGSMVPFAAQQAMNMSTAAQVQSGATVN 120
Query: 375 SLLLGIYRFWRSQAPMDKPHAPVDDRMLPAIVDASDNRAALGTWATALFCTILASNLLGL 554
SLLLGIYRFWRSQAPMDKPHAPVDDRMLPAIVDASDNRAALGTWATALFCTILASNLLGL
Sbjct: 121 SLLLGIYRFWRSQAPMDKPHAPVDDRMLPAIVDASDNRAALGTWATALFCTILASNLLGL 180
Query: 555 VPTNEAPTSGLGFATGLGVSVWATATTLGLYKLGFSFPGHFIPGGTPWPMAFIFVPLETI 734
VPTNEAPTSGLGFATGLGVSVWATATTLGLYKLGFSFPGHFIPGGTPWPMAFIFVPLETI
Sbjct: 181 VPTNEAPTSGLGFATGLGVSVWATATTLGLYKLGFSFPGHFIPGGTPWPMAFIFVPLETI 240
Query: 735 SYTFRAVSLGVRLWVNMLAGHTLLHILTGMALALPFSLSFFAMVPATFAVACLLSALVGL 914
SYTFRAVSLGVRLWVNMLAGHTLLHILTGMALALPFSLSFFAMVPATFAVACLLSALVGL
Sbjct: 241 SYTFRAVSLGVRLWVNMLAGHTLLHILTGMALALPFSLSFFAMVPATFAVACLLSALVGL 300
Query: 915 EYLVAVLQSGVFSILSTVYVGEFNSVKLAGPLAKVVKKAL 1034
EYLVAVLQSGVFSILSTVYVGEFNSVKLAGPLAKVVKKAL
Sbjct: 301 EYLVAVLQSGVFSILSTVYVGEFNSVKLAGPLAKVVKKAL 340
>gb|AAN70986.1|AF388174_1 ATP synthase subunit 6 [Chlamydomonas reinhardtii]
Length = 340
Score = 660 bits (1703), Expect = 0.0
Identities = 338/340 (99%), Positives = 338/340 (99%)
Frame = +3
Query: 15 MALQQAAPRVFGLLGRAPVALGQSGILTGSSGFKNQGFNGSLQSVENHVYAQAFSTSSQE 194
MALQQAAPRVFGLLGRAPVALGQSGILTGSSGFKNQGFNGSLQSVENHVYAQAFSTSSQE
Sbjct: 1 MALQQAAPRVFGLLGRAPVALGQSGILTGSSGFKNQGFNGSLQSVENHVYAQAFSTSSQE 60
Query: 195 EQAAPSIQGASGMKLPGMAGSMLLGKSRSGLRTGSMVPFAAQQAMNMSTAAQVQSGATVN 374
EQAAPSIQGASGMKLPGMAGSMLLGKSRSGLRTGSMVPFAAQQAMNMSTAAQVQSGATVN
Sbjct: 61 EQAAPSIQGASGMKLPGMAGSMLLGKSRSGLRTGSMVPFAAQQAMNMSTAAQVQSGATVN 120
Query: 375 SLLLGIYRFWRSQAPMDKPHAPVDDRMLPAIVDASDNRAALGTWATALFCTILASNLLGL 554
SLLLGIYRFWRSQAPMDKPHAPVDDRMLPAIVDASDN AALGTWATALFCTILASNLLGL
Sbjct: 121 SLLLGIYRFWRSQAPMDKPHAPVDDRMLPAIVDASDNCAALGTWATALFCTILASNLLGL 180
Query: 555 VPTNEAPTSGLGFATGLGVSVWATATTLGLYKLGFSFPGHFIPGGTPWPMAFIFVPLETI 734
VPTNEAPTSGLGFATGLGVSVW TATTLGLYKLGFSFPGHFIPGGTPWPMAFIFVPLETI
Sbjct: 181 VPTNEAPTSGLGFATGLGVSVWVTATTLGLYKLGFSFPGHFIPGGTPWPMAFIFVPLETI 240
Query: 735 SYTFRAVSLGVRLWVNMLAGHTLLHILTGMALALPFSLSFFAMVPATFAVACLLSALVGL 914
SYTFRAVSLGVRLWVNMLAGHTLLHILTGMALALPFSLSFFAMVPATFAVACLLSALVGL
Sbjct: 241 SYTFRAVSLGVRLWVNMLAGHTLLHILTGMALALPFSLSFFAMVPATFAVACLLSALVGL 300
Query: 915 EYLVAVLQSGVFSILSTVYVGEFNSVKLAGPLAKVVKKAL 1034
EYLVAVLQSGVFSILSTVYVGEFNSVKLAGPLAKVVKKAL
Sbjct: 301 EYLVAVLQSGVFSILSTVYVGEFNSVKLAGPLAKVVKKAL 340
>gb|AAL35726.1| ATP synthase subunit 6 [Chlamydomonas reinhardtii]
Length = 340
Score = 656 bits (1693), Expect = 0.0
Identities = 337/340 (99%), Positives = 339/340 (99%)
Frame = +3
Query: 15 MALQQAAPRVFGLLGRAPVALGQSGILTGSSGFKNQGFNGSLQSVENHVYAQAFSTSSQE 194
MALQQAAPRVFGLLGRAPVALGQSGILTGSSGFKNQGFNGSLQSVENHVYAQAFSTSSQE
Sbjct: 1 MALQQAAPRVFGLLGRAPVALGQSGILTGSSGFKNQGFNGSLQSVENHVYAQAFSTSSQE 60
Query: 195 EQAAPSIQGASGMKLPGMAGSMLLGKSRSGLRTGSMVPFAAQQAMNMSTAAQVQSGATVN 374
EQAAPSIQGASG+KLPGMAGS+LLGKSRSGLRTGSMVPFAAQQAMNMSTAAQVQSGATVN
Sbjct: 61 EQAAPSIQGASGIKLPGMAGSILLGKSRSGLRTGSMVPFAAQQAMNMSTAAQVQSGATVN 120
Query: 375 SLLLGIYRFWRSQAPMDKPHAPVDDRMLPAIVDASDNRAALGTWATALFCTILASNLLGL 554
SLLLGIYRFWRSQAPMDKPHAPVDDRMLPAIVDASDNRAALGTWATALFCTILASNLLGL
Sbjct: 121 SLLLGIYRFWRSQAPMDKPHAPVDDRMLPAIVDASDNRAALGTWATALFCTILASNLLGL 180
Query: 555 VPTNEAPTSGLGFATGLGVSVWATATTLGLYKLGFSFPGHFIPGGTPWPMAFIFVPLETI 734
VPTNEAPTSGLGFATGLGVSVWATATTLGLYKLGFSFPGHFIPGGTP PMAFIFVPLETI
Sbjct: 181 VPTNEAPTSGLGFATGLGVSVWATATTLGLYKLGFSFPGHFIPGGTPRPMAFIFVPLETI 240
Query: 735 SYTFRAVSLGVRLWVNMLAGHTLLHILTGMALALPFSLSFFAMVPATFAVACLLSALVGL 914
SYTFRAVSLGVRLWVNMLAGHTLLHILTGMALALPFSLSFFAMVPATFAVACLLSALVGL
Sbjct: 241 SYTFRAVSLGVRLWVNMLAGHTLLHILTGMALALPFSLSFFAMVPATFAVACLLSALVGL 300
Query: 915 EYLVAVLQSGVFSILSTVYVGEFNSVKLAGPLAKVVKKAL 1034
EYLVAVLQSGVFSILSTVYVGEFNSVKLAGPLAKVVKKAL
Sbjct: 301 EYLVAVLQSGVFSILSTVYVGEFNSVKLAGPLAKVVKKAL 340
>gb|AAF72060.1|AF204057_15 ATP synthase F0 subunit 6 [Scenedesmus obliquus]
Length = 304
Score = 137 bits (344), Expect = 7e-31
Identities = 74/159 (46%), Positives = 95/159 (59%)
Frame = +3
Query: 504 WATALFCTILASNLLGLVPTNEAPTSGLGFATGLGVSVWATATTLGLYKLGFSFPGHFIP 683
W++ LF +LASN GLVP A T GF G+ + + + T LG+ + G F F+P
Sbjct: 134 WSSVLFFILLASNSFGLVPLCSAITGQAGFTLGMSIRLLSGITYLGVKRQGMRFVRLFLP 193
Query: 684 GGTPWPMAFIFVPLETISYTFRAVSLGVRLWVNMLAGHTLLHILTGMALALPFSLSFFAM 863
G WPMA +F+ LE+ISY FRA+SLG RL+ NM AGH LLH+ T ++L
Sbjct: 194 SGPSWPMAPLFILLESISYGFRAISLGTRLYCNMFAGHLLLHLFTSLSLVPVLCTPVLLG 253
Query: 864 VPATFAVACLLSALVGLEYLVAVLQSGVFSILSTVYVGE 980
P T A +L AL LE +VAVLQSGVF +LS YV E
Sbjct: 254 APFTVIAASILMALSALETIVAVLQSGVFCLLSGFYVTE 292
>ref|NP_057983.1| ATPase subunit 6 [Scenedesmus obliquus] gi|7711044|emb|CAB90368.1|
ATPase subunit 6 [Scenedesmus obliquus]
Length = 253
Score = 137 bits (344), Expect = 7e-31
Identities = 74/159 (46%), Positives = 95/159 (59%)
Frame = +3
Query: 504 WATALFCTILASNLLGLVPTNEAPTSGLGFATGLGVSVWATATTLGLYKLGFSFPGHFIP 683
W++ LF +LASN GLVP A T GF G+ + + + T LG+ + G F F+P
Sbjct: 83 WSSVLFFILLASNSFGLVPLCSAITGQAGFTLGMSIRLLSGITYLGVKRQGMRFVRLFLP 142
Query: 684 GGTPWPMAFIFVPLETISYTFRAVSLGVRLWVNMLAGHTLLHILTGMALALPFSLSFFAM 863
G WPMA +F+ LE+ISY FRA+SLG RL+ NM AGH LLH+ T ++L
Sbjct: 143 SGPSWPMAPLFILLESISYGFRAISLGTRLYCNMFAGHLLLHLFTSLSLVPVLCTPVLLG 202
Query: 864 VPATFAVACLLSALVGLEYLVAVLQSGVFSILSTVYVGE 980
P T A +L AL LE +VAVLQSGVF +LS YV E
Sbjct: 203 APFTVIAASILMALSALETIVAVLQSGVFCLLSGFYVTE 241
