Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000416A_C01 KCC000416A_c01
(524 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_005520.2| heparan sulfate proteoglycan 2; heparan sulfate... 38 0.090
pir||A38096 perlecan precursor - human gi|184427|gb|AAA52700.1| ... 38 0.090
sp|P98160|PGBM_HUMAN Basement membrane-specific heparan sulfate ... 38 0.090
gb|AAA52699.1| heparan sulfate proteoglycan 38 0.090
emb|CAC18534.1| heparan sulfate proteoglycan perlecan [Homo sapi... 38 0.090
>ref|NP_005520.2| heparan sulfate proteoglycan 2; heparan sulfate proteoglycan of
basement membrane; endorepellin (domain V region);
perlecan [Homo sapiens] gi|29470|emb|CAA44373.1| Human
basement membrane heparan sulfate proteoglycan core
protein [Homo sapiens]
Length = 4393
Score = 37.7 bits (86), Expect = 0.090
Identities = 27/81 (33%), Positives = 34/81 (41%), Gaps = 7/81 (8%)
Frame = +1
Query: 232 PYCRCCA---AGRQPWSAAPSANGFPSQGESGQR----PSHVGASLRPQASTSSPGHSRG 390
P C C+ +GR AP G PSQG+ QR P +G + PQ S SS
Sbjct: 1234 PTCDACSPGHSGRHCERCAPGYYGNPSQGQPCQRDSQVPGPIGCNCDPQGSVSS------ 1287
Query: 391 LLV*APPAMCPATSRCQAQAQ 453
C A +CQ +AQ
Sbjct: 1288 --------QCDAAGQCQCKAQ 1300
>pir||A38096 perlecan precursor - human gi|184427|gb|AAA52700.1| heparan sulfate
proteoglycan
Length = 4391
Score = 37.7 bits (86), Expect = 0.090
Identities = 27/81 (33%), Positives = 34/81 (41%), Gaps = 7/81 (8%)
Frame = +1
Query: 232 PYCRCCA---AGRQPWSAAPSANGFPSQGESGQR----PSHVGASLRPQASTSSPGHSRG 390
P C C+ +GR AP G PSQG+ QR P +G + PQ S SS
Sbjct: 1232 PTCDACSPGHSGRHCERCAPGYYGNPSQGQPCQRDSQVPGPIGCNCDPQGSVSS------ 1285
Query: 391 LLV*APPAMCPATSRCQAQAQ 453
C A +CQ +AQ
Sbjct: 1286 --------QCDAAGQCQCKAQ 1298
>sp|P98160|PGBM_HUMAN Basement membrane-specific heparan sulfate proteoglycan core protein
precursor (HSPG) (Perlecan) (PLC)
Length = 4391
Score = 37.7 bits (86), Expect = 0.090
Identities = 27/81 (33%), Positives = 34/81 (41%), Gaps = 7/81 (8%)
Frame = +1
Query: 232 PYCRCCA---AGRQPWSAAPSANGFPSQGESGQR----PSHVGASLRPQASTSSPGHSRG 390
P C C+ +GR AP G PSQG+ QR P +G + PQ S SS
Sbjct: 1232 PTCDACSPGHSGRHCERCAPGYYGNPSQGQPCQRDSQVPGPIGCNCDPQGSVSS------ 1285
Query: 391 LLV*APPAMCPATSRCQAQAQ 453
C A +CQ +AQ
Sbjct: 1286 --------QCDAAGQCQCKAQ 1298
>gb|AAA52699.1| heparan sulfate proteoglycan
Length = 453
Score = 37.7 bits (86), Expect = 0.090
Identities = 27/81 (33%), Positives = 34/81 (41%), Gaps = 7/81 (8%)
Frame = +1
Query: 232 PYCRCCA---AGRQPWSAAPSANGFPSQGESGQR----PSHVGASLRPQASTSSPGHSRG 390
P C C+ +GR AP G PSQG+ QR P +G + PQ S SS
Sbjct: 215 PTCDACSPGHSGRHCERCAPGYYGNPSQGQPCQRDSQVPGPIGCNCDPQGSVSS------ 268
Query: 391 LLV*APPAMCPATSRCQAQAQ 453
C A +CQ +AQ
Sbjct: 269 --------QCDAAGQCQCKAQ 281
>emb|CAC18534.1| heparan sulfate proteoglycan perlecan [Homo sapiens]
Length = 4370
Score = 37.7 bits (86), Expect = 0.090
Identities = 27/81 (33%), Positives = 34/81 (41%), Gaps = 7/81 (8%)
Frame = +1
Query: 232 PYCRCCA---AGRQPWSAAPSANGFPSQGESGQR----PSHVGASLRPQASTSSPGHSRG 390
P C C+ +GR AP G PSQG+ QR P +G + PQ S SS
Sbjct: 1211 PTCDACSPGHSGRHCERCAPGYYGNPSQGQPCQRDSQVPGPIGCNCDPQGSVSS------ 1264
Query: 391 LLV*APPAMCPATSRCQAQAQ 453
C A +CQ +AQ
Sbjct: 1265 --------QCDAAGQCQCKAQ 1277
