Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000410A_C01 KCC000410A_c01
(530 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_870908.1| sensory transduction histidine kinase [Pirellul... 35 0.79
gb|AAQ23623.1| GM01353p [Drosophila melanogaster] 33 1.8
ref|ZP_00093803.1| hypothetical protein [Novosphingobium aromati... 33 2.3
ref|XP_285267.1| similar to hypothetical protein FLJ39106 [Homo ... 33 3.0
ref|ZP_00004761.1| COG0624: Acetylornithine deacetylase/Succinyl... 32 3.9
>ref|NP_870908.1| sensory transduction histidine kinase [Pirellula sp.]
gi|32448471|emb|CAD77986.1| sensory transduction
histidine kinase [Pirellula sp.]
Length = 953
Score = 34.7 bits (78), Expect = 0.79
Identities = 17/48 (35%), Positives = 25/48 (51%)
Frame = +1
Query: 142 PTRLQAAVTATIRCSIKKVDTQEAVLPHHQASQVHPLTMKPATTTRRY 285
P++LQ+ V T R + VDT + P QAS P +T+TR +
Sbjct: 719 PSKLQSPVAGTCRLIFQIVDTGIGIKPEDQASLFEPFVQADSTSTRSF 766
>gb|AAQ23623.1| GM01353p [Drosophila melanogaster]
Length = 1124
Score = 33.5 bits (75), Expect = 1.8
Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 3/135 (2%)
Frame = +3
Query: 72 LAAAWKPPEHMRLERSR*ALPYHTHSAAGRGNRHN*VQHQEGGHAGSRLASPPSITGAPL 251
+A A PP H ++R + P A+ + Q G +GS A+ +G+
Sbjct: 18 VAEAVAPPPHPDVQRRQHQPPDLLQGASSSAEYFDSGQ----GASGSSGAASSGFSGSFY 73
Query: 252 NNETCYDN*ALSLV--DQYRPCGLSATVNPHTTAMCATTHCASASTSSALAISAAMNLW- 422
N D S Q P L A+ + + CAT ++ASTS+A A +A+ +
Sbjct: 74 NALQMMDTTESSGAGTSQSTPPALGASSTTASKSTCATVGSSTASTSAAAAAAASASAGS 133
Query: 423 LHGTVYTLRQRRSSS 467
H + Y LR++ S+S
Sbjct: 134 SHQSPYDLRRKISAS 148
>ref|ZP_00093803.1| hypothetical protein [Novosphingobium aromaticivorans]
Length = 483
Score = 33.1 bits (74), Expect = 2.3
Identities = 17/46 (36%), Positives = 29/46 (62%)
Frame = +3
Query: 282 LSLVDQYRPCGLSATVNPHTTAMCATTHCASASTSSALAISAAMNL 419
L+LVD + ++ + ++A+ ATT ++A+ +ALAI AA NL
Sbjct: 29 LALVDDRKEAVVNMADSVESSALLATTQASTATAQAALAIGAATNL 74
>ref|XP_285267.1| similar to hypothetical protein FLJ39106 [Homo sapiens] [Mus
musculus]
Length = 293
Score = 32.7 bits (73), Expect = 3.0
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +3
Query: 312 GLSATVNPHTTAMCATTHCASASTSSALAISAAMNLWLHGTVYT 443
GL+ T +P TTA ATT AST++ +A+++ + T T
Sbjct: 148 GLATTTSPETTATTATTAPTEASTTTTMAVTSTQPVTTTATTTT 191
>ref|ZP_00004761.1| COG0624: Acetylornithine deacetylase/Succinyl-diaminopimelate
desuccinylase and related deacylases [Rhodobacter
sphaeroides]
Length = 793
Score = 32.3 bits (72), Expect = 3.9
Identities = 24/61 (39%), Positives = 30/61 (48%), Gaps = 1/61 (1%)
Frame = -2
Query: 232 LGGEARRLPACPPS*CCT*LWRLPRPAAEWV*YGSAYRL-RSRRMCSGGFHAAASCVSHG 56
LG ++R PA RL +WV G+A R + RRM SGG H AA+ S G
Sbjct: 702 LGTQSRSQPA-----------RLSPAMIDWVAGGAARRGDQPRRMLSGGGHDAAAFASAG 750
Query: 55 W 53
W
Sbjct: 751 W 751
