Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000408A_C01 KCC000408A_c01
(561 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_063956.1| ATP-binding cassette, sub-family C, member 1 is... 35 0.69
dbj|BAC34837.1| unnamed protein product [Mus musculus] 33 2.6
gb|EAA20165.1| hypothetical protein [Plasmodium yoelii yoelii] 33 3.4
emb|CAC83674.1| mucin 5 [Homo sapiens] 32 4.5
ref|ZP_00099385.1| COG1132: ABC-type multidrug transport system,... 32 4.5
>ref|NP_063956.1| ATP-binding cassette, sub-family C, member 1 isoform 6; multiple
drug resistance-associated protein; multiple drug
resistance protein 1; multidrug resistance protein [Homo
sapiens]
Length = 1489
Score = 35.0 bits (79), Expect = 0.69
Identities = 15/46 (32%), Positives = 25/46 (53%)
Frame = +1
Query: 424 WIKGHLAVIATARITIQNALDKTPCCWQTSSYAARLAFWLLKTLIV 561
W+ + +A R I AL + PC ++S+ +R+ FW + LIV
Sbjct: 142 WLVALVCALAILRSKIMTALKENPCPESSASFLSRITFWWITGLIV 187
>dbj|BAC34837.1| unnamed protein product [Mus musculus]
Length = 895
Score = 33.1 bits (74), Expect = 2.6
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 7/60 (11%)
Frame = +1
Query: 211 INEGYCVKSQLPHVSSSQM-------SSQPLRHPQYTSHVHEPHFKRKSVSYIKRKRAVQ 369
IN+GY ++ VSSS SSQPL HP+ + V+ F SV+ + K ++Q
Sbjct: 827 INQGYKLQRDQVAVSSSSWQSPPPPSSSQPLAHPEQLAEVNLRQFITPSVNVLVEKESLQ 886
>gb|EAA20165.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 240
Score = 32.7 bits (73), Expect = 3.4
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +1
Query: 277 PLRHPQYTSHVHEPHFKRKSVSYIKRKRAVQYRIRSLVCPQTQTNPFEPWIKGH 438
PL H Y++ H+ K K +S IKR+ + S + Q +P++ IKG+
Sbjct: 143 PLHHRAYSNISHKKETKNKIISNIKREHLFSDQTGSNIKYQYNNSPYQKKIKGN 196
>emb|CAC83674.1| mucin 5 [Homo sapiens]
Length = 2448
Score = 32.3 bits (72), Expect = 4.5
Identities = 27/87 (31%), Positives = 34/87 (39%)
Frame = +3
Query: 138 PNACPVHDLPV*VHVSPTLTIVYPNQRRILRQITAPACLVFANVVSTPAASSIHITCARA 317
P CPV PV +P+ + P Q Q + LV + STP S+ T A
Sbjct: 2217 PKGCPVTSTPVTAPSTPSGRAISPTQSTSSWQKSRTTTLVTTSTTSTPQTST---TYAHT 2273
Query: 318 TLQTKERQLYQTQEGSTI*NQVTSVPT 398
T T T +T TSVPT
Sbjct: 2274 TSTTSAPTARTTSAPTT---STTSVPT 2297
>ref|ZP_00099385.1| COG1132: ABC-type multidrug transport system, ATPase and permease
components [Desulfitobacterium hafniense]
Length = 650
Score = 32.3 bits (72), Expect = 4.5
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = +2
Query: 44 FRGGAGSRNPAHGAGRTGARPPPLQTLNPNTAK 142
FRGG G ++ AHG G G +PP NP TAK
Sbjct: 4 FRGGPG-KSSAHGRGLPGGKPPH-DKFNPQTAK 34
