Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000401A_C01 KCC000401A_c01
(570 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC82365.1| unknown [Myxococcus xanthus] 59 4e-08
gb|AAK61383.1| basic proline-rich protein [Sus scrofa] 55 9e-07
gb|AAK30607.1|AF350278_1 major ampullate spidroin 2 [Nephila mad... 55 9e-07
gb|AAC50901.1| TBP-associated factor [Homo sapiens] 54 1e-06
gb|AAF43497.1|AF134579_1 arabinogalactan protein [Zea mays] 54 2e-06
>gb|AAC82365.1| unknown [Myxococcus xanthus]
Length = 542
Score = 59.3 bits (142), Expect = 4e-08
Identities = 50/158 (31%), Positives = 55/158 (34%), Gaps = 7/158 (4%)
Frame = -3
Query: 544 RCRWPDPRT*RWALARAARTPCCRATPR-PSPPAGSRRPAAGWPWCACPACAAAPAPPPA 368
RC P T P CRA P P+P AG P AG CA C P
Sbjct: 106 RCGPPRKSTPTRCCTPCPAPPRCRARPSAPAPSAGRTCPTAGPSSCASGCC-------PT 158
Query: 367 RPCRSQPGPPA*AWRPGCSRTGPGPGPSRRCTAGSQTSRTAARADLARLCGAST-----P 203
C S PGP P P P P+ + RT R A GA+ P
Sbjct: 159 GRCGSAPGPTPHGAEPSPPSQSPSPAPA----SSGGRRRTHPRPARASAAGATAPACLPP 214
Query: 202 PGCCR*GGCACGR-RPQLATWPAPPAPARPPTHPLTPG 92
P CC G C R P + PP P P T P G
Sbjct: 215 PRCCGRPGTGCARTAPPSTSASHPPPPRSPGTPPRASG 252
Score = 49.7 bits (117), Expect = 3e-05
Identities = 56/182 (30%), Positives = 69/182 (37%), Gaps = 12/182 (6%)
Frame = -3
Query: 550 PPRCRWPDPRT*RWALARAARTPCCRATPRPSPPAGSR----RPAAGWPWCA------CP 401
PP R P T + +A PC P SPP R R + P CA CP
Sbjct: 31 PPGARPPPTETASYPPPQAVPGPCAPRAPPRSPPPRRRHRGSRHRSFRPTCARRSGRRCP 90
Query: 400 ACAAAPAPPPARPCRSQPGPPA*AWRPGCSRTGPGPGPSRRCTAGSQTSRTAARADLARL 221
A + PA P R + GPP + C P P RC A +A
Sbjct: 91 APSRHARRNPAGPSR-RCGPPRKSTPTRCCTPCPAP---PRCRARPSAPAPSAGRTCPTA 146
Query: 220 CGASTPPGCCR*GGC--ACGRRPQLATWPAPPAPARPPTHPLTPGRSFFRRCLRKVARKS 47
+S GCC G C A G P A P+PP+ + P + GR RR + AR S
Sbjct: 147 GPSSCASGCCPTGRCGSAPGPTPHGAE-PSPPSQSPSPAPASSGGR---RRTHPRPARAS 202
Query: 46 PA 41
A
Sbjct: 203 AA 204
Score = 46.6 bits (109), Expect = 2e-04
Identities = 49/154 (31%), Positives = 65/154 (41%), Gaps = 20/154 (12%)
Frame = -3
Query: 505 LARAARTPCCRATP---RPSPPA---------GSRRP----AAGWPWCACPACAAAPAPP 374
+ + +R C TP RP PP G+R P A+ P A P A APP
Sbjct: 1 MGKTSRDGSCHGTPAPGRPFPPPCLLSERTPPGARPPPTETASYPPPQAVPGPCAPRAPP 60
Query: 373 PARPCRSQP-GPPA*AWRPGCSRTGPGPGPSRRCTAGSQTSRTAARADLARLCG---AST 206
+ P R + G ++RP C+R RRC A S+ +R A +R CG ST
Sbjct: 61 RSPPPRRRHRGSRHRSFRPTCARRS-----GRRCPAPSRHARRNP-AGPSRRCGPPRKST 114
Query: 205 PPGCCR*GGCACGRRPQLATWPAPPAPARPPTHP 104
P CC C P+ P+ PAP+ T P
Sbjct: 115 PTRCC----TPCPAPPRCRARPSAPAPSAGRTCP 144
Score = 43.9 bits (102), Expect = 0.002
Identities = 48/161 (29%), Positives = 55/161 (33%), Gaps = 21/161 (13%)
Frame = +2
Query: 128 SRWCRPRRQLWTPTACA------------PASSTASRGR*STA*ACKICT--CSRTARL* 265
SR C P R+ TPT C P++ S GR C C T R
Sbjct: 104 SRRCGPPRKS-TPTRCCTPCPAPPRCRARPSAPAPSAGRTCPTAGPSSCASGCCPTGRC- 161
Query: 266 ASSTTPARTWTWPCAATSRPPSSSRRPWLRSTGASRRR-------SWCRCTSWTSAPRPT 424
+ P T P A PPS S P S+G RR S T+ P P
Sbjct: 162 --GSAPGPT---PHGAEPSPPSQSPSPAPASSGGRRRTHPRPARASAAGATAPACLPPPR 216
Query: 425 CCGTPATGWRARAWRRATAWSSCCTRECPSSSSRIGPPASR 547
CCG P TG C R P S+S PP R
Sbjct: 217 CCGRPGTG---------------CARTAPPSTSASHPPPPR 242
Score = 34.7 bits (78), Expect = 0.94
Identities = 30/100 (30%), Positives = 38/100 (38%), Gaps = 13/100 (13%)
Frame = -3
Query: 508 ALARAARTPCCRATPRPSPPAGSRRPAAGWPWCACPACAAAPAPPPARPCR--------- 356
A A A P C PP RP G A P+ +A+ PPP P
Sbjct: 201 ASAAGATAPACLP-----PPRCCGRPGTGCARTAPPSTSASHPPPPRSPGTPPRASGSPA 255
Query: 355 SQPGPPA*AWRPGCSRTGPGPG----PSRRCTAGSQTSRT 248
+ P PP+ A RP T P P P+ C + S+ T
Sbjct: 256 AAPAPPSPACRPPPPGTTPAPRNAALPALPCISPSRQRAT 295
>gb|AAK61383.1| basic proline-rich protein [Sus scrofa]
Length = 676
Score = 54.7 bits (130), Expect = 9e-07
Identities = 49/157 (31%), Positives = 52/157 (32%), Gaps = 1/157 (0%)
Frame = -3
Query: 559 GTGPPRCRWPDPRT*RWALARAARTPCC-RATPRPSPPAGSRRPAAGWPWCACPACAAAP 383
G PP R P P + P + +P PPAG P P A P P
Sbjct: 407 GPAPPGARPPPPPPPPADEPQQGPAPSGDKPKKKPPPPAGPPPPGPPSPGPAPPGARPPP 466
Query: 382 APPPARPCRSQPGPPA*AWRPGCSRTGPGPGPSRRCTAGSQTSRTAARADLARLCGASTP 203
PPP P P PP RP PGP P G AR P
Sbjct: 467 GPPPPGPPPPGPAPP--GARPPPGPPPPGPPPPGPAPPG------------ARPPPGPPP 512
Query: 202 PGCCR*GGCACGRRPQLATWPAPPAPARPPTHPLTPG 92
PG G G RP P PP P PP P PG
Sbjct: 513 PGPPPPGPAPPGARPP----PGPPPPGPPPPGPAPPG 545
Score = 51.2 bits (121), Expect = 1e-05
Identities = 42/127 (33%), Positives = 42/127 (33%)
Frame = -3
Query: 472 ATPRPSPPAGSRRPAAGWPWCACPACAAAPAPPPARPCRSQPGPPA*AWRPGCSRTGPGP 293
A P PP G P P A P P PPP P P PP RP PGP
Sbjct: 220 APPGARPPPGPPPPGPPPPGPAPPGARPPPGPPPLGPPPPGPAPP--GARPPPGPPPPGP 277
Query: 292 GPSRRCTAGSQTSRTAARADLARLCGASTPPGCCR*GGCACGRRPQLATWPAPPAPARPP 113
P G AR PPG G G RP P PP P PP
Sbjct: 278 PPPGPAPPG------------ARPPPGPPPPGPPPPGPAPPGARPP----PGPPPPGPPP 321
Query: 112 THPLTPG 92
P PG
Sbjct: 322 PGPAPPG 328
Score = 51.2 bits (121), Expect = 1e-05
Identities = 42/127 (33%), Positives = 42/127 (33%)
Frame = -3
Query: 472 ATPRPSPPAGSRRPAAGWPWCACPACAAAPAPPPARPCRSQPGPPA*AWRPGCSRTGPGP 293
A P PP G P P A P P PPP P P PP RP PGP
Sbjct: 115 APPDARPPPGPPPPGPPPPGPAPPGARPPPGPPPPGPPPPGPAPP--GARPPPGPPPPGP 172
Query: 292 GPSRRCTAGSQTSRTAARADLARLCGASTPPGCCR*GGCACGRRPQLATWPAPPAPARPP 113
P G AR PPG G G RP P PP P PP
Sbjct: 173 PPPGPAPPG------------ARPPPGPPPPGPPPPGPAPPGARPP----PGPPPPGPPP 216
Query: 112 THPLTPG 92
P PG
Sbjct: 217 PGPAPPG 223
Score = 51.2 bits (121), Expect = 1e-05
Identities = 42/127 (33%), Positives = 42/127 (33%)
Frame = -3
Query: 472 ATPRPSPPAGSRRPAAGWPWCACPACAAAPAPPPARPCRSQPGPPA*AWRPGCSRTGPGP 293
A P PP G P P A P P PPP P P PP RP PGP
Sbjct: 283 APPGARPPPGPPPPGPPPPGPAPPGARPPPGPPPPGPPPPGPAPP--GARPPPGPPPPGP 340
Query: 292 GPSRRCTAGSQTSRTAARADLARLCGASTPPGCCR*GGCACGRRPQLATWPAPPAPARPP 113
P G AR PPG G G RP P PP P PP
Sbjct: 341 PPPGPAPPG------------ARPPPGPPPPGPPPPGPAPPGARPP----PGPPPPGPPP 384
Query: 112 THPLTPG 92
P PG
Sbjct: 385 PGPAPPG 391
Score = 51.2 bits (121), Expect = 1e-05
Identities = 42/127 (33%), Positives = 42/127 (33%)
Frame = -3
Query: 472 ATPRPSPPAGSRRPAAGWPWCACPACAAAPAPPPARPCRSQPGPPA*AWRPGCSRTGPGP 293
A P PP G P P A P P PPP P P PP RP PGP
Sbjct: 304 APPGARPPPGPPPPGPPPPGPAPPGARPPPGPPPPGPPPPGPAPP--GARPPPGPPPPGP 361
Query: 292 GPSRRCTAGSQTSRTAARADLARLCGASTPPGCCR*GGCACGRRPQLATWPAPPAPARPP 113
P G AR PPG G G RP P PP P PP
Sbjct: 362 PPPGPAPPG------------ARPPPGPPPPGPPPPGPAPPGARPP----PGPPPPGPPP 405
Query: 112 THPLTPG 92
P PG
Sbjct: 406 PGPAPPG 412
Score = 51.2 bits (121), Expect = 1e-05
Identities = 42/127 (33%), Positives = 42/127 (33%)
Frame = -3
Query: 472 ATPRPSPPAGSRRPAAGWPWCACPACAAAPAPPPARPCRSQPGPPA*AWRPGCSRTGPGP 293
A P PP G P P A P P PPP P P PP RP PGP
Sbjct: 542 APPGARPPPGPPPPGPPPPGPAPPGARPPPGPPPPGPPPPGPAPPG--ARPPPGPPPPGP 599
Query: 292 GPSRRCTAGSQTSRTAARADLARLCGASTPPGCCR*GGCACGRRPQLATWPAPPAPARPP 113
P G AR PPG G G RP P PP P PP
Sbjct: 600 PPPGPAPPG------------ARPPPGPPPPGPPPPGPAPPGARPP----PGPPPPGPPP 643
Query: 112 THPLTPG 92
P PG
Sbjct: 644 PGPAPPG 650
Score = 51.2 bits (121), Expect = 1e-05
Identities = 42/127 (33%), Positives = 42/127 (33%)
Frame = -3
Query: 472 ATPRPSPPAGSRRPAAGWPWCACPACAAAPAPPPARPCRSQPGPPA*AWRPGCSRTGPGP 293
A P PP G P P A P P PPP P P PP RP PGP
Sbjct: 500 APPGARPPPGPPPPGPPPPGPAPPGARPPPGPPPPGPPPPGPAPP--GARPPPGPPPPGP 557
Query: 292 GPSRRCTAGSQTSRTAARADLARLCGASTPPGCCR*GGCACGRRPQLATWPAPPAPARPP 113
P G AR PPG G G RP P PP P PP
Sbjct: 558 PPPGPAPPG------------ARPPPGPPPPGPPPPGPAPPGARPP----PGPPPPGPPP 601
Query: 112 THPLTPG 92
P PG
Sbjct: 602 PGPAPPG 608
Score = 50.8 bits (120), Expect = 1e-05
Identities = 42/127 (33%), Positives = 42/127 (33%)
Frame = -3
Query: 472 ATPRPSPPAGSRRPAAGWPWCACPACAAAPAPPPARPCRSQPGPPA*AWRPGCSRTGPGP 293
A P PP G P P A P P PPP P P PP RP PGP
Sbjct: 73 APPGAEPPPGPPPPGPPPPGPAPPGARPPPGPPPPGPPPPGPAPP--DARPPPGPPPPGP 130
Query: 292 GPSRRCTAGSQTSRTAARADLARLCGASTPPGCCR*GGCACGRRPQLATWPAPPAPARPP 113
P G AR PPG G G RP P PP P PP
Sbjct: 131 PPPGPAPPG------------ARPPPGPPPPGPPPPGPAPPGARPP----PGPPPPGPPP 174
Query: 112 THPLTPG 92
P PG
Sbjct: 175 PGPAPPG 181
Score = 50.4 bits (119), Expect = 2e-05
Identities = 47/139 (33%), Positives = 48/139 (33%), Gaps = 2/139 (1%)
Frame = -3
Query: 502 ARAARTPCCRATPRPSPPAGSRRPAAGWPWCACPACAAAPAPPPARPCRS--QPGPPA*A 329
AR P P P P RP G P P PAPP ARP PGPP
Sbjct: 224 ARPPPGPPPPGPPPPGPAPPGARPPPGPPPLGPPP--PGPAPPGARPPPGPPPPGPPPPG 281
Query: 328 WRPGCSRTGPGPGPSRRCTAGSQTSRTAARADLARLCGASTPPGCCR*GGCACGRRPQLA 149
P +R PGP P G AR PPG G G RP
Sbjct: 282 PAPPGARPPPGPPPPGPPPPGPAPPG-------ARPPPGPPPPGPPPPGPAPPGARPP-- 332
Query: 148 TWPAPPAPARPPTHPLTPG 92
P PP P PP P PG
Sbjct: 333 --PGPPPPGPPPPGPAPPG 349
Score = 47.8 bits (112), Expect = 1e-04
Identities = 41/125 (32%), Positives = 42/125 (32%), Gaps = 2/125 (1%)
Frame = -3
Query: 472 ATPRPSPPAGSRRPAAGWPWCACPACAAAPAPPPARPCRSQPGPPA*AWRPGCSRTGPGP 293
A P PP G P P A P P PPP P P PP RP PGP
Sbjct: 563 APPGARPPPGPPPPGPPPPGPAPPGARPPPGPPPPGPPPPGPAPPG--ARPPPGPPPPGP 620
Query: 292 GPSRRCTAGSQTSRTAARADLARLCGASTPPGCCR*GGCACGRRPQLATWPAPPAPA--R 119
P G AR PPG G G RP P PP P+ R
Sbjct: 621 PPPGPAPPG------------ARPPPGPPPPGPPPPGPAPPGARPPPGPPPPPPGPSPPR 668
Query: 118 PPTHP 104
PP P
Sbjct: 669 PPPGP 673
Score = 47.4 bits (111), Expect = 1e-04
Identities = 47/140 (33%), Positives = 48/140 (33%), Gaps = 3/140 (2%)
Frame = -3
Query: 502 ARAARTPCCRATPRPSPPAGSRRPAAGWPWCACPACAAAPAPPPARPCRS--QPGPPA*A 329
AR P P P P RP G P P PAPP ARP PGPP
Sbjct: 161 ARPPPGPPPPGPPPPGPAPPGARPPPGPPPPGPPP--PGPAPPGARPPPGPPPPGPPPPG 218
Query: 328 WRPGCSRTGPGPGPSRRCTAGSQTSRTAARADLARLCGASTPPGCCR*GGCACGRRPQLA 149
P +R PGP P G GA PPG G G P A
Sbjct: 219 PAPPGARPPPGPPPPGPPPPGPAPP------------GARPPPGPPPLGPPPPGPAPPGA 266
Query: 148 -TWPAPPAPARPPTHPLTPG 92
P PP P PP P PG
Sbjct: 267 RPPPGPPPPGPPPPGPAPPG 286
Score = 47.4 bits (111), Expect = 1e-04
Identities = 41/127 (32%), Positives = 41/127 (32%)
Frame = -3
Query: 472 ATPRPSPPAGSRRPAAGWPWCACPACAAAPAPPPARPCRSQPGPPA*AWRPGCSRTGPGP 293
A P PP G P P A P P PPP P P PP RP PGP
Sbjct: 157 APPGARPPPGPPPPGPPPPGPAPPGARPPPGPPPPGPPPPGPAPP--GARPPPGPPPPGP 214
Query: 292 GPSRRCTAGSQTSRTAARADLARLCGASTPPGCCR*GGCACGRRPQLATWPAPPAPARPP 113
P G AR PPG G G RP P PP PP
Sbjct: 215 PPPGPAPPG------------ARPPPGPPPPGPPPPGPAPPGARPP----PGPPPLGPPP 258
Query: 112 THPLTPG 92
P PG
Sbjct: 259 PGPAPPG 265
Score = 46.6 bits (109), Expect = 2e-04
Identities = 43/142 (30%), Positives = 45/142 (31%), Gaps = 15/142 (10%)
Frame = -3
Query: 472 ATPRPSPPAGSRRPAAGWPWCACPACAAAPAPPPARP---------CRSQPGPPA*A--- 329
A P PP G P P A P P PPP P R PGPP
Sbjct: 346 APPGARPPPGPPPPGPPPPGPAPPGARPPPGPPPPGPPPPGPAPPGARPPPGPPPPGPPP 405
Query: 328 ---WRPGCSRTGPGPGPSRRCTAGSQTSRTAARADLARLCGASTPPGCCR*GGCACGRRP 158
PG P P P+ G S + G PPG G G RP
Sbjct: 406 PGPAPPGARPPPPPPPPADEPQQGPAPSGDKPKKKPPPPAG-PPPPGPPSPGPAPPGARP 464
Query: 157 QLATWPAPPAPARPPTHPLTPG 92
P PP P PP P PG
Sbjct: 465 P----PGPPPPGPPPPGPAPPG 482
Score = 41.6 bits (96), Expect = 0.008
Identities = 46/148 (31%), Positives = 50/148 (33%), Gaps = 11/148 (7%)
Frame = -3
Query: 502 ARAARTPCCRATPRPSPPAGSRRPAAGWPWCACPACAAAPAPPPARPCRS--QPGPPA*A 329
AR P P P P RP G P P PAPP ARP PGPP
Sbjct: 329 ARPPPGPPPPGPPPPGPAPPGARPPPGPPPPGPPP--PGPAPPGARPPPGPPPPGPPPPG 386
Query: 328 WRPGCSRTGPGPGPSRRCTAGSQTSRTAARADLARLCGASTPPGCCR*GGCACGRRPQLA 149
P +R PGP P G + AR A P G ++P
Sbjct: 387 PAPPGARPPPGPPPPGPPPPG--PAPPGARPPPPPPPPADEPQQGPAPSGDKPKKKPPPP 444
Query: 148 TWPAPPAP---------ARPPTHPLTPG 92
P PP P ARPP P PG
Sbjct: 445 AGPPPPGPPSPGPAPPGARPPPGPPPPG 472
Score = 39.3 bits (90), Expect = 0.038
Identities = 31/95 (32%), Positives = 31/95 (32%), Gaps = 4/95 (4%)
Frame = -3
Query: 559 GTGPPRCRWPDPRT*RWALARAARTPCCRATPRPSPPAGSRRPAAGWPWCACPACAAAPA 380
G PP R P P R P P PP G P P P P
Sbjct: 582 GPAPPGARPPPGPPPPGPPPPGPAPPGARPPPGPPPP-GPPPPGPAPPGARPPPGPPPPG 640
Query: 379 PPPARPC----RSQPGPPA*AWRPGCSRTGPGPGP 287
PPP P R PGPP P R PGP P
Sbjct: 641 PPPPGPAPPGARPPPGPPPPPPGPSPPRPPPGPPP 675
>gb|AAK30607.1|AF350278_1 major ampullate spidroin 2 [Nephila madagascariensis]
Length = 563
Score = 54.7 bits (130), Expect = 9e-07
Identities = 55/162 (33%), Positives = 67/162 (40%), Gaps = 12/162 (7%)
Frame = +3
Query: 117 GRAGAGGAGHVANCG---RLPHAHPPHRQHPGGV----EAPHRRARSARAAVRLVCEPAV 275
G +G G A A G + P + P +Q PGG + P +A AA P
Sbjct: 2 GPSGPGSAAAAAAAGPGQQGPGGYGPGQQGPGGYGPGQQGPSGPGSAAAAAAAAAAGPGQ 61
Query: 276 QRR--LGPGP-GPVRLHPGRQAQAG-GPG*DLQGRAGGGAGAAAQAGQAHQGQPAAG-RR 440
Q GPGP GP PG+Q +G GPG G A AAA AG QG G +
Sbjct: 62 QGPGGYGPGPQGPGGYGPGQQGPSGYGPGQQGPSGPGSAASAAAAAGSGQQGPGGYGPGQ 121
Query: 441 LPAGGLGRGVARQHGVRAARASAHRQVRGSGHRHRGGPVPVQ 566
GG G G G +A A+A G G + GG P Q
Sbjct: 122 QGPGGYGPGQQGPSGPGSAAAAA---AAGPGQQGPGGYGPGQ 160
Score = 45.8 bits (107), Expect = 4e-04
Identities = 53/161 (32%), Positives = 65/161 (39%), Gaps = 7/161 (4%)
Frame = +3
Query: 93 PGVSG*VGGRAGAGGAGHVANCGRL-PHAHPPHRQHPG--GVEAPHRRARSARAAVRLVC 263
PG G G + A A A G+ P + P +Q PG G P A +A A
Sbjct: 247 PGQQGPSGPGSAAAAAAAAAGPGQQGPGGYGPGQQGPGQQGPSGPGSAAAAAAA------ 300
Query: 264 EPAVQRRLGPGP-GPVRLHPGRQAQAGGPG*DLQGRAGGGAGAAAQAGQAHQGQP--AAG 434
GPGP GP PG+Q GPG G A AAA AG QG G
Sbjct: 301 --------GPGPQGPGGYGPGQQ----GPGGYGPSGPGSAAAAAAAAGPGQQGPGGYGPG 348
Query: 435 RRLPAG-GLGRGVARQHGVRAARASAHRQVRGSGHRHRGGP 554
++ P+G G G+ G AA A+A +G G GP
Sbjct: 349 QQRPSGYGPGQQGPSGPGSAAAAAAAGPGQQGPGAYGPSGP 389
Score = 39.7 bits (91), Expect = 0.029
Identities = 53/162 (32%), Positives = 63/162 (38%), Gaps = 15/162 (9%)
Frame = +3
Query: 93 PGVSG*VGGRAGAGGAGHVANCGRLPHAHPPHRQHPGGVEAPHRRARSA--RAAVRLVCE 266
PG G G + A A + P + P +Q P G P ++ S AA
Sbjct: 317 PGGYGPSGPGSAAAAAAAAGPGQQGPGGYGPGQQRPSGY-GPGQQGPSGPGSAAAAAAAG 375
Query: 267 PAVQRRLGPGP-GPVRLHPGRQAQA---GGPG*DLQGRAGGGAGAAAQA------GQAHQ 416
P Q GPG GP PG A A GG G QG +G G+ AAA A G Q
Sbjct: 376 PGQQ---GPGAYGPSG--PGSAAAAAGLGGYGPAQQGPSGAGSAAAAAAAGPGGYGPVQQ 430
Query: 417 GQPAAGRRLPAGGLG---RGVARQHGVRAARASAHRQVRGSG 533
G G GG G +G AR AA A+A G G
Sbjct: 431 GPSGPGSAAGPGGYGPAQQGPARYGPGSAAAAAAAAGSAGYG 472
Score = 39.3 bits (90), Expect = 0.038
Identities = 57/187 (30%), Positives = 70/187 (36%), Gaps = 37/187 (19%)
Frame = +3
Query: 117 GRAGAGGAGHVANCG---RLPHAHPPHRQHPGGVEAPHRRARS---ARAAVRLVCEPAVQ 278
G +G G A A G + P + P +Q PGG P ++ S + AA P Q
Sbjct: 133 GPSGPGSAAAAAAAGPGQQGPGGYGPGQQGPGGY-GPGQQGPSGPGSAAAAAAAAGPGQQ 191
Query: 279 RRLGPGPG---PVRLHPGRQ----------AQAGGPG*D------------------LQG 365
G GPG P PG+Q A A GPG QG
Sbjct: 192 GPGGYGPGQQGPGGYGPGQQGPSGPGSAAAAAAAGPGQQGPGGYGPGQQGPGGYGPGQQG 251
Query: 366 RAGGGAGAAAQAGQAHQGQPAAGRRLPAGGLGRGVARQHGVRAARASAHRQVRGSGHRHR 545
+G G+ AAA A A GQ G P G G G G +A A+A G G +
Sbjct: 252 PSGPGSAAAAAAAAAGPGQQGPGGYGP-GQQGPGQQGPSGPGSAAAAA---AAGPGPQGP 307
Query: 546 GGPVPVQ 566
GG P Q
Sbjct: 308 GGYGPGQ 314
>gb|AAC50901.1| TBP-associated factor [Homo sapiens]
Length = 947
Score = 54.3 bits (129), Expect = 1e-06
Identities = 49/139 (35%), Positives = 56/139 (40%), Gaps = 17/139 (12%)
Frame = -3
Query: 460 PSPPAGSRRP------AAGWPWCACPACAAAPAPPPARPCRSQPGPPA*AWRPGCSR--- 308
P+PPA RP A P A A AA P P PA P + GP A A R G
Sbjct: 15 PAPPAAKLRPPPEGSAGACAPVPAAAAVAAGPEPAPAGPAKPA-GPAALAARAGPGPGPG 73
Query: 307 TGPGPGPSRRCTAGSQTSRTAARADLARLCGASTPPGCCR*GGCAC-----GRRPQLATW 143
GPGPGP + G+ + + A L A+ G A P A
Sbjct: 74 PGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPAAAPP 133
Query: 142 PAPPAPA---RPPTHPLTP 95
P PPAPA RPP HP P
Sbjct: 134 PPPPAPATLARPPGHPAGP 152
Score = 34.7 bits (78), Expect = 0.94
Identities = 46/150 (30%), Positives = 52/150 (34%), Gaps = 23/150 (15%)
Frame = -3
Query: 484 PCCRATPRPSPPAGSRRPA---AGWPWCAC----PACA-------AAPAPPPARP----C 359
P P P PA RP AG P A PA A AAPAP PA
Sbjct: 128 PAAAPPPPPPAPATLARPPGHPAGPPTAALAVPPPAAAQNGGSAGAAPAPAPAAGGPAGV 187
Query: 358 RSQPGPPA*AWRPGCSRTGPGPG-----PSRRCTAGSQTSRTAARADLARLCGASTPPGC 194
QPGP G + P PG P R A ++T A + G ++
Sbjct: 188 SGQPGP-------GAAAAAPAPGVKAESPKRVVQAAPPAAQTLAAS------GPASTAAS 234
Query: 193 CR*GGCACGRRPQLATWPAPPAPARPPTHP 104
G G P A P PPAP P P
Sbjct: 235 MVIGPTMQGALPSPAAVP-PPAPGTPTGLP 263
>gb|AAF43497.1|AF134579_1 arabinogalactan protein [Zea mays]
Length = 274
Score = 53.5 bits (127), Expect = 2e-06
Identities = 51/164 (31%), Positives = 62/164 (37%), Gaps = 29/164 (17%)
Frame = -3
Query: 502 ARAARTPCCRATPRPSPPAGSRRP-----AAGW--PWCACPACAAAPAPPPA---RPCRS 353
+R +R C +T S A RRP + W PW A P CA+ P P PCR
Sbjct: 54 SRGSRPSPCSSTATSSTSAPGRRPRGTTTSTAWSSPWTASP-CASCREPTPRGRPAPCRR 112
Query: 352 QPGPPA*AWRPGCSR-------TGPGPGPSRR----CTAGSQTSRTAARADLARLCGAST 206
P P A A CS +GP P PS+R CT + TA+R A +
Sbjct: 113 CPSP-APARPTACSSRSTAGSPSGPTPCPSQRRSPGCTGTASRPTTASRTLTWPSSSARS 171
Query: 205 PPGCCR*GGCACG--------RRPQLATWPAPPAPARPPTHPLT 98
PP C RPQ W RP + PLT
Sbjct: 172 PPTCTAWSARRTAPTTSTGSMSRPQCPPWEGTATTPRPASSPLT 215
Score = 43.5 bits (101), Expect = 0.002
Identities = 40/149 (26%), Positives = 56/149 (36%)
Frame = +2
Query: 65 SQTAPEE*AARRQRMSWRPCWSRWCRPRRQLWTPTACAPASSTASRGR*STA*ACKICTC 244
S TA +A +R + W P WT + CA RGR + C
Sbjct: 63 SSTATSSTSAPGRRPRGTTTSTAWSSP----WTASPCASCREPTPRGRPAPCRRCPSPAP 118
Query: 245 SRTARL*ASSTTPARTWTWPCAATSRPPSSSRRPWLRSTGASRRRSWCRCTSWTSAPRPT 424
+R + ST + + PC + R P + R T ASR +W S ++ PT
Sbjct: 119 ARPTACSSRSTAGSPSGPTPCPSQRRSPGCTGTA-SRPTTASRTLTW---PSSSARSPPT 174
Query: 425 CCGTPATGWRARAWRRATAWSSCCTRECP 511
C T W AR T+ S +CP
Sbjct: 175 C-----TAWSARRTAPTTSTGSMSRPQCP 198
Score = 37.4 bits (85), Expect = 0.15
Identities = 44/156 (28%), Positives = 59/156 (37%), Gaps = 26/156 (16%)
Frame = +2
Query: 170 ACAPASSTASRGR*STA*ACKICTCSRTARL*ASSTTPARTWTWPCAATSR--------- 322
A + A++T S STA CS TA ++ T+ A T C TSR
Sbjct: 8 ASSAATATPST---STAAGTPTSACSPTATSTSTRTSSASTAPTACPGTSRGSRPSPCSS 64
Query: 323 -PPSSSRRPWLRSTGASRRRSWCRCTSWTSAPRPTC--------------CGTPATGWRA 457
SS+ P R G + +W + WT++P +C C +PA
Sbjct: 65 TATSSTSAPGRRPRGTTTSTAW--SSPWTASPCASCREPTPRGRPAPCRRCPSPAPARPT 122
Query: 458 RAWRRATAWSSCCTRECPSSSSRIG--PPASRWTCA 559
R+TA S CPS G ASR T A
Sbjct: 123 ACSSRSTAGSPSGPTPCPSQRRSPGCTGTASRPTTA 158
Score = 37.4 bits (85), Expect = 0.15
Identities = 46/163 (28%), Positives = 66/163 (40%), Gaps = 32/163 (19%)
Frame = +2
Query: 161 TPT-ACAPASSTASRGR*STA*ACKICT----------CSRTARL*ASSTTPAR------ 289
TPT AC+P +++ S S + A C CS TA +S++ P R
Sbjct: 24 TPTSACSPTATSTSTRTSSASTAPTACPGTSRGSRPSPCSSTAT--SSTSAPGRRPRGTT 81
Query: 290 -TWTWPCAATSRPPSSSRRPWLRSTGASRRRSWCRCTSWTSAPRPTCC------GTPATG 448
+ W T+ P +S R P R A RR C S A RPT C G+P+
Sbjct: 82 TSTAWSSPWTASPCASCREPTPRGRPAPCRR----CPSPAPA-RPTACSSRSTAGSPSGP 136
Query: 449 WRARAWRRATAWSSCCTREC--------PSSSSRIGPPASRWT 553
+ RR+ + +R PSSS+R P + W+
Sbjct: 137 TPCPSQRRSPGCTGTASRPTTASRTLTWPSSSARSPPTCTAWS 179
